Merge remote-tracking branch 'origin/master' into fix/ppi-kaks-enable
# Conflicts: # tests/unit/test_router_analysis_handoff_boundary.py
This commit is contained in:
potaser
@@ -6112,8 +6112,9 @@ def run_stage(
|
||||
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target_species = kwargs.get("target_species")
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interspecies_ref_species = kwargs.get("interspecies_ref_species")
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scope_file = str(kwargs.get("scope_file") or kwargs.get("scopeFile") or "").strip()
|
||||
analysis_route = str(kwargs.get("analysis_route") or kwargs.get("analysisRoute") or "").strip()
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||||
scope_file = str(kwargs.get("scope_file") or kwargs.get("scopeFile") or "").strip()
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||||
scope_id = str(kwargs.get("scope_id") or kwargs.get("scopeId") or "").strip()
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||||
analysis_route = str(kwargs.get("analysis_route") or kwargs.get("analysisRoute") or "").strip()
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||||
analysis_mode = str(kwargs.get("analysis_mode") or kwargs.get("analysisMode") or "").strip()
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||||
member_set_id = str(kwargs.get("member_set_id") or kwargs.get("memberSetId") or "").strip()
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combo_output_label = str(combo_output_label or kwargs.get("comboOutputLabel") or kwargs.get("combo_output_label") or "").strip()
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||||
@@ -8432,7 +8433,62 @@ def run_stage(
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else:
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return f"❌ PEP failed (exit code: {code}). Log: {log_file}", manifest
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|
||||
if stage == "summary":
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if stage == "gene_family_report":
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||||
expected_stages = kwargs.get("expected_stages") or kwargs.get("expectedStages") or []
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if isinstance(expected_stages, str):
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expected_stages = [value.strip() for value in expected_stages.split(",") if value.strip()]
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else:
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expected_stages = [str(value).strip() for value in expected_stages if str(value).strip()]
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||||
report_action = str(kwargs.get("report_action") or kwargs.get("reportAction") or "generate").strip()
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||||
if report_action == "generate" and not expected_stages:
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||||
return "❌ 基因家族结果报告生成需要非空 expected_stages", manifest
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||||
stage_statuses = kwargs.get("stage_statuses") or kwargs.get("stageStatuses") or {}
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if isinstance(stage_statuses, str):
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||||
try:
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stage_statuses = json.loads(stage_statuses)
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||||
except json.JSONDecodeError:
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||||
return "❌ 基因家族结果报告的 stage_statuses 不是合法 JSON", manifest
|
||||
if not isinstance(stage_statuses, dict):
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||||
return "❌ 基因家族结果报告的 stage_statuses 必须是对象", manifest
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||||
report_use_model_raw = kwargs.get("report_use_model", kwargs.get("reportUseModel", True))
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rnaseq_scope_id = str(kwargs.get("rnaseq_scope_id") or kwargs.get("rnaseqScopeId") or "").strip()
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cmd = [
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sys.executable,
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"apps/cli/run_gene_family_report.py",
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||||
"--workspace",
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||||
str(ws),
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||||
"--prefix",
|
||||
prefix,
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||||
"--job-id",
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||||
job.job_id,
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||||
"--expected-stages",
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||||
",".join(expected_stages),
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||||
"--stage-statuses-json",
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||||
json.dumps(stage_statuses, ensure_ascii=False, separators=(",", ":")),
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"--action",
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report_action,
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]
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for flag, value in (
|
||||
("--scope-id", scope_id),
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||||
("--analysis-route", analysis_route),
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||||
("--member-set-id", member_set_id),
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||||
("--rnaseq-scope-id", rnaseq_scope_id),
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||||
):
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||||
if value:
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cmd += [flag, value]
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||||
if not _truthy(report_use_model_raw):
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||||
cmd.append("--no-model")
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code = run_cmd_logged(cmd, log_file, cwd=Path("."))
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report_manifests = sorted(
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final_dir.glob(f"{prefix}*.gene_family_report.manifest.json"),
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||||
key=lambda path: path.stat().st_mtime,
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||||
)
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report_manifest = report_manifests[-1] if report_manifests else manifest
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||||
if code != 0:
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||||
return f"❌ 基因家族结果报告生成失败，日志：{log_file}", report_manifest
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||||
return f"✅ 基因家族结果报告已生成。日志：{log_file}", report_manifest
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||||
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||||
if stage == "summary":
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||||
summary_manifest_seed = (
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||||
ws / "final" / f"{prefix}.identify.manifest.json"
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||||
if (ws / "final" / f"{prefix}.identify.manifest.json").exists()
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Executable
+416
@@ -0,0 +1,416 @@
|
||||
<!-- Agent状态显示组件 - 可嵌入index.html -->
|
||||
<template id="agent-status-component">
|
||||
<div class="agent-status-panel">
|
||||
<div class="agent-header">
|
||||
<h3>{{ t('agent-assistant') }}</h3>
|
||||
<span class="agent-mode">{{ currentMode }}</span>
|
||||
</div>
|
||||
|
||||
<div class="agent-messages" ref="messageContainer">
|
||||
<div v-for="(msg, index) in messages" :key="index"
|
||||
:class="['message', msg.role]">
|
||||
<div class="message-role">{{ getRoleLabel(msg.role) }}</div>
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||||
<div class="message-content" v-html="formatMessage(msg.content)"></div>
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||||
<div class="message-time">{{ formatTime(msg.timestamp) }}</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<div class="agent-input">
|
||||
<textarea v-model="userInput"
|
||||
:placeholder="t('enter-question')"
|
||||
@keydown.enter.prevent="sendMessage"
|
||||
rows="3"></textarea>
|
||||
<button @click="sendMessage" :disabled="isProcessing">
|
||||
{{ isProcessing ? t('processing') : t('send') }}
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||||
</button>
|
||||
</div>
|
||||
|
||||
<div class="agent-tasks" v-if="tasks.length > 0">
|
||||
<h4>{{ t('task-list') }}</h4>
|
||||
<div v-for="task in tasks" :key="task.task_id"
|
||||
:class="['task-item', task.status]"
|
||||
@click="selectTask(task)">
|
||||
<span class="task-status">{{ getStatusIcon(task.status) }}</span>
|
||||
<span class="task-message">{{ task.message }}</span>
|
||||
<span class="task-progress">{{ task.progress }}%</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</template>
|
||||
|
||||
<script src="/static/i18n.js"></script>
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||||
// Agent状态组件
|
||||
const AgentStatusComponent = {
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||||
template: '#agent-status-component',
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||||
|
||||
data() {
|
||||
return {
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||||
messages: [],
|
||||
userInput: '',
|
||||
isProcessing: false,
|
||||
currentMode: '',
|
||||
sessionId: '',
|
||||
tasks: [],
|
||||
currentTask: null,
|
||||
pollingInterval: null
|
||||
};
|
||||
},
|
||||
|
||||
mounted() {
|
||||
this.sessionId = 'session_' + Date.now();
|
||||
this.currentMode = t('standby');
|
||||
this.loadTasks();
|
||||
this.startPolling();
|
||||
},
|
||||
|
||||
beforeUnmount() {
|
||||
this.stopPolling();
|
||||
},
|
||||
|
||||
methods: {
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||||
async sendMessage() {
|
||||
if (!this.userInput.trim() || this.isProcessing) return;
|
||||
|
||||
const message = this.userInput.trim();
|
||||
this.userInput = '';
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||||
this.isProcessing = true;
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||||
|
||||
// 添加用户消息
|
||||
this.addMessage('user', message);
|
||||
|
||||
try {
|
||||
// 调用Agent执行API
|
||||
const response = await fetch('/api/agent/execute', {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
message: message,
|
||||
session_id: this.sessionId,
|
||||
model: 'kimi'
|
||||
})
|
||||
});
|
||||
|
||||
const data = await response.json();
|
||||
|
||||
if (data.success) {
|
||||
this.currentTask = data.task_id;
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||||
this.addMessage('system', t('msg-task-submitted') + data.task_id);
|
||||
this.loadTasks();
|
||||
} else {
|
||||
this.addMessage('error', data.message || t('msg-submit-failed'));
|
||||
}
|
||||
} catch (error) {
|
||||
this.addMessage('error', t('msg-request-failed') + error.message);
|
||||
}
|
||||
|
||||
this.isProcessing = false;
|
||||
},
|
||||
|
||||
async loadTasks() {
|
||||
try {
|
||||
const response = await fetch('/api/agent/tasks');
|
||||
const data = await response.json();
|
||||
|
||||
if (data.success) {
|
||||
this.tasks = data.tasks;
|
||||
}
|
||||
} catch (error) {
|
||||
console.error(t('msg-load-task-failed'), error);
|
||||
}
|
||||
},
|
||||
|
||||
async checkTaskStatus(taskId) {
|
||||
try {
|
||||
const response = await fetch(`/api/agent/status/${taskId}`);
|
||||
const data = await response.json();
|
||||
|
||||
if (data.success && data.task) {
|
||||
const task = data.task;
|
||||
|
||||
// 更新任务状态
|
||||
const taskIndex = this.tasks.findIndex(t => t.task_id === taskId);
|
||||
if (taskIndex >= 0) {
|
||||
this.tasks[taskIndex] = { ...this.tasks[taskIndex], ...task };
|
||||
}
|
||||
|
||||
// 如果任务完成，显示结果
|
||||
if (task.status === 'completed' && task.result) {
|
||||
this.addMessage('assistant', task.result.response || t('msg-task-completed'));
|
||||
|
||||
// 显示执行结果摘要
|
||||
if (task.result.execution_result) {
|
||||
const execResult = task.result.execution_result;
|
||||
if (execResult.status === 'success') {
|
||||
const manifest = execResult.manifest || {};
|
||||
const metrics = manifest.metrics || {};
|
||||
this.addMessage('system',
|
||||
t('msg-analysis-complete') + (metrics.final_members || 0) + t('msg-gene-members'));
|
||||
}
|
||||
}
|
||||
} else if (task.status === 'failed') {
|
||||
this.addMessage('error', task.result?.response || t('msg-task-failed'));
|
||||
}
|
||||
}
|
||||
} catch (error) {
|
||||
console.error(t('msg-check-task-status-failed'), error);
|
||||
}
|
||||
},
|
||||
|
||||
selectTask(task) {
|
||||
this.currentTask = task.task_id;
|
||||
this.checkTaskStatus(task.task_id);
|
||||
},
|
||||
|
||||
startPolling() {
|
||||
this.pollingInterval = setInterval(() => {
|
||||
if (this.currentTask) {
|
||||
this.checkTaskStatus(this.currentTask);
|
||||
}
|
||||
this.loadTasks();
|
||||
}, 3000); // 每3秒轮询一次
|
||||
},
|
||||
|
||||
stopPolling() {
|
||||
if (this.pollingInterval) {
|
||||
clearInterval(this.pollingInterval);
|
||||
}
|
||||
},
|
||||
|
||||
addMessage(role, content) {
|
||||
this.messages.push({
|
||||
role: role,
|
||||
content: content,
|
||||
timestamp: new Date().toISOString()
|
||||
});
|
||||
|
||||
// 滚动到底部
|
||||
setTimeout(() => {
|
||||
const container = this.$refs.messageContainer;
|
||||
if (container) {
|
||||
container.scrollTop = container.scrollHeight;
|
||||
}
|
||||
}, 100);
|
||||
},
|
||||
|
||||
getRoleLabel(role) {
|
||||
const keys = {
|
||||
'user': 'user-role',
|
||||
'assistant': 'agent-role',
|
||||
'system': 'system-role',
|
||||
'error': 'error-role',
|
||||
'execution': 'execution-role',
|
||||
'planning': 'planning-role',
|
||||
'diagnosis': 'diagnosis-role'
|
||||
};
|
||||
return keys[role] ? t(keys[role]) : role;
|
||||
},
|
||||
|
||||
getStatusIcon(status) {
|
||||
const icons = {
|
||||
'pending': '⏳',
|
||||
'running': '🔄',
|
||||
'completed': '✅',
|
||||
'failed': '❌',
|
||||
'cancelled': '🚫'
|
||||
};
|
||||
return icons[status] || '❓';
|
||||
},
|
||||
|
||||
formatMessage(content) {
|
||||
// 简单的Markdown格式化
|
||||
return content
|
||||
.replace(/\*\*(.+?)\*\*/g, '<strong>$1</strong>')
|
||||
.replace(/\n/g, '<br>');
|
||||
},
|
||||
|
||||
formatTime(timestamp) {
|
||||
if (!timestamp) return '';
|
||||
const date = new Date(timestamp);
|
||||
return date.toLocaleTimeString('zh-CN', {
|
||||
hour: '2-digit',
|
||||
minute: '2-digit',
|
||||
second: '2-digit'
|
||||
});
|
||||
},
|
||||
|
||||
t(key) {
|
||||
return window.t ? window.t(key) : key;
|
||||
}
|
||||
}
|
||||
};
|
||||
</script>
|
||||
|
||||
<style>
|
||||
.agent-status-panel {
|
||||
border: 1px solid #ddd;
|
||||
border-radius: 8px;
|
||||
padding: 16px;
|
||||
background: #f9f9f9;
|
||||
height: 100%;
|
||||
display: flex;
|
||||
flex-direction: column;
|
||||
}
|
||||
|
||||
.agent-header {
|
||||
display: flex;
|
||||
justify-content: space-between;
|
||||
align-items: center;
|
||||
margin-bottom: 12px;
|
||||
padding-bottom: 8px;
|
||||
border-bottom: 1px solid #eee;
|
||||
}
|
||||
|
||||
.agent-header h3 {
|
||||
margin: 0;
|
||||
font-size: 16px;
|
||||
}
|
||||
|
||||
.agent-mode {
|
||||
font-size: 12px;
|
||||
color: #666;
|
||||
background: #e0e0e0;
|
||||
padding: 2px 8px;
|
||||
border-radius: 4px;
|
||||
}
|
||||
|
||||
.agent-messages {
|
||||
flex: 1;
|
||||
overflow-y: auto;
|
||||
max-height: 400px;
|
||||
margin-bottom: 12px;
|
||||
}
|
||||
|
||||
.message {
|
||||
margin-bottom: 12px;
|
||||
padding: 8px 12px;
|
||||
border-radius: 8px;
|
||||
background: white;
|
||||
border-left: 3px solid #ddd;
|
||||
}
|
||||
|
||||
.message.user {
|
||||
border-left-color: #4CAF50;
|
||||
background: #E8F5E9;
|
||||
}
|
||||
|
||||
.message.assistant {
|
||||
border-left-color: #2196F3;
|
||||
background: #E3F2FD;
|
||||
}
|
||||
|
||||
.message.error {
|
||||
border-left-color: #f44336;
|
||||
background: #FFEBEE;
|
||||
}
|
||||
|
||||
.message.system {
|
||||
border-left-color: #9E9E9E;
|
||||
background: #F5F5F5;
|
||||
font-size: 12px;
|
||||
}
|
||||
|
||||
.message-role {
|
||||
font-size: 12px;
|
||||
color: #666;
|
||||
margin-bottom: 4px;
|
||||
}
|
||||
|
||||
.message-content {
|
||||
font-size: 14px;
|
||||
line-height: 1.5;
|
||||
}
|
||||
|
||||
.message-time {
|
||||
font-size: 11px;
|
||||
color: #999;
|
||||
text-align: right;
|
||||
margin-top: 4px;
|
||||
}
|
||||
|
||||
.agent-input {
|
||||
display: flex;
|
||||
gap: 8px;
|
||||
margin-bottom: 12px;
|
||||
}
|
||||
|
||||
.agent-input textarea {
|
||||
flex: 1;
|
||||
padding: 8px;
|
||||
border: 1px solid #ddd;
|
||||
border-radius: 4px;
|
||||
resize: none;
|
||||
font-family: inherit;
|
||||
}
|
||||
|
||||
.agent-input button {
|
||||
padding: 8px 16px;
|
||||
background: #2196F3;
|
||||
color: white;
|
||||
border: none;
|
||||
border-radius: 4px;
|
||||
cursor: pointer;
|
||||
}
|
||||
|
||||
.agent-input button:disabled {
|
||||
background: #ccc;
|
||||
cursor: not-allowed;
|
||||
}
|
||||
|
||||
.agent-tasks {
|
||||
border-top: 1px solid #eee;
|
||||
padding-top: 12px;
|
||||
}
|
||||
|
||||
.agent-tasks h4 {
|
||||
margin: 0 0 8px 0;
|
||||
font-size: 14px;
|
||||
}
|
||||
|
||||
.task-item {
|
||||
display: flex;
|
||||
align-items: center;
|
||||
gap: 8px;
|
||||
padding: 6px 8px;
|
||||
border-radius: 4px;
|
||||
cursor: pointer;
|
||||
margin-bottom: 4px;
|
||||
background: white;
|
||||
}
|
||||
|
||||
.task-item:hover {
|
||||
background: #f0f0f0;
|
||||
}
|
||||
|
||||
.task-item.pending {
|
||||
border-left: 3px solid #FFC107;
|
||||
}
|
||||
|
||||
.task-item.running {
|
||||
border-left: 3px solid #2196F3;
|
||||
}
|
||||
|
||||
.task-item.completed {
|
||||
border-left: 3px solid #4CAF50;
|
||||
}
|
||||
|
||||
.task-item.failed {
|
||||
border-left: 3px solid #f44336;
|
||||
}
|
||||
|
||||
.task-status {
|
||||
font-size: 14px;
|
||||
}
|
||||
|
||||
.task-message {
|
||||
flex: 1;
|
||||
font-size: 12px;
|
||||
overflow: hidden;
|
||||
text-overflow: ellipsis;
|
||||
white-space: nowrap;
|
||||
}
|
||||
|
||||
.task-progress {
|
||||
font-size: 11px;
|
||||
color: #666;
|
||||
}
|
||||
</style>
|
||||
Executable
+391
@@ -0,0 +1,391 @@
|
||||
<!DOCTYPE html>
|
||||
<html lang="zh-CN">
|
||||
<head>
|
||||
<meta charset="UTF-8">
|
||||
<script src="/static/i18n.js"></script>
|
||||
<meta name="viewport" content="width=device-width, initial-scale=1.0">
|
||||
<title>BotanicalBaseAgent</title>
|
||||
<link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/element-plus@2.3.14/dist/index.css">
|
||||
<script src="https://cdn.jsdelivr.net/npm/vue@3.3.4/dist/vue.global.prod.js"></script>
|
||||
<script src="https://cdn.jsdelivr.net/npm/element-plus@2.3.14/dist/index.full.js"></script>
|
||||
<script src="https://cdn.jsdelivr.net/npm/@element-plus/icons-vue@2.1.0/dist/index.iife.js"></script>
|
||||
<link rel="stylesheet" href="conversation-sidebar.css">
|
||||
<style>
|
||||
* { box-sizing: border-box; }
|
||||
body {
|
||||
margin: 0;
|
||||
font-family: 'Helvetica Neue', Arial, sans-serif;
|
||||
background: #f5f7fa;
|
||||
}
|
||||
.header {
|
||||
background: linear-gradient(135deg, #667eea 0%, #764ba2 100%);
|
||||
color: white;
|
||||
padding: 15px 20px;
|
||||
}
|
||||
.header h1 { margin: 0; font-size: 22px; }
|
||||
.main-container {
|
||||
display: flex;
|
||||
height: calc(100vh - 60px);
|
||||
overflow: hidden;
|
||||
}
|
||||
|
||||
/* 左侧控制面板 */
|
||||
.left-panel {
|
||||
width: 280px;
|
||||
background: white;
|
||||
border-right: 1px solid #e4e7ed;
|
||||
display: flex;
|
||||
flex-direction: column;
|
||||
padding: 15px;
|
||||
gap: 15px;
|
||||
overflow-y: auto;
|
||||
}
|
||||
|
||||
/* 中间内容区 */
|
||||
.center-panel {
|
||||
flex: 1;
|
||||
display: flex;
|
||||
flex-direction: column;
|
||||
padding: 15px;
|
||||
gap: 15px;
|
||||
overflow: hidden;
|
||||
}
|
||||
|
||||
/* 右侧结果区 */
|
||||
.right-panel {
|
||||
width: 350px;
|
||||
background: white;
|
||||
border-left: 1px solid #e4e7ed;
|
||||
padding: 15px;
|
||||
overflow-y: auto;
|
||||
}
|
||||
|
||||
.panel-section {
|
||||
background: white;
|
||||
border-radius: 8px;
|
||||
padding: 15px;
|
||||
box-shadow: 0 2px 8px rgba(0,0,0,0.08);
|
||||
}
|
||||
|
||||
.panel-title {
|
||||
font-size: 14px;
|
||||
font-weight: bold;
|
||||
color: #409EFF;
|
||||
margin-bottom: 12px;
|
||||
padding-bottom: 8px;
|
||||
border-bottom: 2px solid #409EFF;
|
||||
}
|
||||
|
||||
.chat-area {
|
||||
flex: 1;
|
||||
background: white;
|
||||
border-radius: 8px;
|
||||
padding: 15px;
|
||||
overflow-y: auto;
|
||||
box-shadow: 0 2px 8px rgba(0,0,0,0.08);
|
||||
}
|
||||
|
||||
.chat-message {
|
||||
margin-bottom: 15px;
|
||||
padding: 12px 16px;
|
||||
border-radius: 8px;
|
||||
max-width: 80%;
|
||||
}
|
||||
|
||||
.chat-message.user {
|
||||
background: #ecf5ff;
|
||||
margin-left: auto;
|
||||
text-align: right;
|
||||
}
|
||||
|
||||
.chat-message.assistant {
|
||||
background: #f0f9eb;
|
||||
}
|
||||
|
||||
.input-area {
|
||||
display: flex;
|
||||
gap: 10px;
|
||||
}
|
||||
|
||||
.stage-tag {
|
||||
display: inline-block;
|
||||
padding: 4px 12px;
|
||||
border-radius: 4px;
|
||||
font-size: 12px;
|
||||
margin: 4px;
|
||||
}
|
||||
|
||||
.stage-tag.success { background: #67C23A; color: white; }
|
||||
.stage-tag.running { background: #E6A23C; color: white; }
|
||||
.stage-tag.pending { background: #909399; color: white; }
|
||||
</style>
|
||||
</head>
|
||||
<body>
|
||||
<div id="app">
|
||||
<!-- Header -->
|
||||
<div class="header">
|
||||
<h1>{{ t('gf-analysis-system') }}</h1>
|
||||
</div>
|
||||
|
||||
<div class="main-container">
|
||||
<!-- 左侧：会话侧边栏 + 控制面板 -->
|
||||
<div class="left-panel">
|
||||
<!-- 会话侧边栏 -->
|
||||
<div class="conversation-sidebar" style="width: 100%; margin: -15px; margin-bottom: 0;">
|
||||
<div class="sidebar-header">
|
||||
<button class="new-chat-btn" @click="createNewConversation" style="flex: 1;">
|
||||
<el-icon><plus /></el-icon>
|
||||
<span>New Chat</span>
|
||||
</button>
|
||||
</div>
|
||||
|
||||
<div class="search-box" style="padding: 12px;">
|
||||
<el-input
|
||||
v-model="searchQuery"
|
||||
:placeholder="t('search-conv')"
|
||||
prefix-icon="search"
|
||||
clearable
|
||||
size="small">
|
||||
</el-input>
|
||||
</div>
|
||||
|
||||
<div class="conversation-list" style="max-height: 300px;">
|
||||
<div class="list-section">
|
||||
<div class="section-title">{{ t('conv-list') }}</div>
|
||||
<div v-for="conv in filteredConversations"
|
||||
:key="conv.id"
|
||||
class="conversation-item"
|
||||
:class="{ active: currentConv?.id === conv.id }"
|
||||
@click="selectConversation(conv)">
|
||||
<div class="item-icon">
|
||||
<el-icon><chat-dot-round /></el-icon>
|
||||
</div>
|
||||
<div class="item-content">
|
||||
<div class="item-title">{{ conv.title }}</div>
|
||||
<div class="item-meta">
|
||||
<span class="gene-family" v-if="conv.gene_family">{{ conv.gene_family }}</span>
|
||||
<span class="message-count">{{ conv.message_count }}{{ t('msg-count') }}</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- 分析控制 -->
|
||||
<div class="panel-section">
|
||||
<div class="panel-title">{{ t('analysis-stage') }}</div>
|
||||
<el-select v-model="selectedStage" :placeholder="t('select-stage')" style="width: 100%;">
|
||||
<el-option :label="t('identify-label')" value="identify"></el-option>
|
||||
<el-option :label="t('phylogeny-label')" value="phylogeny"></el-option>
|
||||
<el-option :label="t('motif-label')" value="motif"></el-option>
|
||||
<el-option :label="t('domain-label')" value="domain"></el-option>
|
||||
<el-option :label="t('expression-label')" value="expression"></el-option>
|
||||
</el-select>
|
||||
<el-button type="primary" style="width: 100%; margin-top: 10px;" @click="executeAnalysis">
|
||||
{{ t('execute-analysis') }}
|
||||
</el-button>
|
||||
</div>
|
||||
|
||||
<!-- 参数设置 -->
|
||||
<div class="panel-section">
|
||||
<div class="panel-title">{{ t('param-settings') }}</div>
|
||||
<el-form :model="params" label-width="80px" size="small">
|
||||
<el-form-item :label="t('prefix')">
|
||||
<el-input v-model="params.prefix" :placeholder="t('prefix-placeholder')"></el-input>
|
||||
</el-form-item>
|
||||
<el-form-item label="CPU">
|
||||
<el-input-number v-model="params.cpu" :min="1" :max="32" style="width: 100%;"></el-input-number>
|
||||
</el-form-item>
|
||||
</el-form>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- 中间：对话区 -->
|
||||
<div class="center-panel">
|
||||
<div class="chat-area">
|
||||
<div v-for="(msg, index) in messages" :key="index"
|
||||
class="chat-message" :class="msg.role">
|
||||
<div style="font-size: 12px; color: #666; margin-bottom: 4px;">
|
||||
{{ msg.role === 'user' ? t('user') : t('ai-assistant') }} · {{ msg.time }}
|
||||
</div>
|
||||
<div>{{ msg.content }}</div>
|
||||
</div>
|
||||
<div v-if="messages.length === 0" style="text-align: center; color: #999; padding: 40px;">
|
||||
<el-icon :size="48" style="display: block; margin-bottom: 10px;"><chat-line-round /></el-icon>
|
||||
<p>{{ t('start-new-chat') }}</p>
|
||||
<p style="font-size: 12px;">{{ t('or-continue') }}</p>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<div class="input-area">
|
||||
<el-input
|
||||
v-model="userInput"
|
||||
type="textarea"
|
||||
:rows="3"
|
||||
:placeholder="t('describe-need')"
|
||||
@keyup.enter.ctrl="sendMessage">
|
||||
</el-input>
|
||||
<el-button type="primary" size="large" @click="sendMessage" :disabled="!userInput.trim()">
|
||||
{{ t('send') }}
|
||||
</el-button>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- 右侧：结果展示 -->
|
||||
<div class="right-panel">
|
||||
<div class="panel-title">📊 Analysis Results</div>
|
||||
|
||||
<div v-for="stage in stages" :key="stage.name" style="margin-bottom: 15px;">
|
||||
<div style="display: flex; justify-content: space-between; align-items: center; margin-bottom: 8px;">
|
||||
<span style="font-weight: 500;">{{ stage.label }}</span>
|
||||
<span class="stage-tag" :class="stage.status">{{ stage.statusText }}</span>
|
||||
</div>
|
||||
<el-progress :percentage="stage.progress" :status="stage.status"></el-progress>
|
||||
</div>
|
||||
|
||||
<el-divider></el-divider>
|
||||
|
||||
<div style="text-align: center; color: #999; padding: 20px;">
|
||||
<el-icon :size="48" style="display: block; margin-bottom: 10px;"><picture /></el-icon>
|
||||
<p>{{ t('results-here') }}</p>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<script>
|
||||
const { createApp, ref, reactive, computed } = Vue;
|
||||
|
||||
const app = createApp({
|
||||
setup() {
|
||||
const t = window.t;
|
||||
document.title = 'BotanicalBaseAgent - ' + t('gf-analysis');
|
||||
// 会话管理
|
||||
const conversations = ref([
|
||||
{ id: 1, title: 'Ft.SPL基因家族分析', gene_family: 'SPL', message_count: 12 },
|
||||
{ id: 2, title: 'Os.TCP进化分析', gene_family: 'TCP', message_count: 5 },
|
||||
{ id: 3, title: 'HMMER参数配置咨询', gene_family: null, message_count: 8 },
|
||||
]);
|
||||
const currentConv = ref(null);
|
||||
const searchQuery = ref('');
|
||||
|
||||
const filteredConversations = computed(() => {
|
||||
if (!searchQuery.value) return conversations.value;
|
||||
const query = searchQuery.value.toLowerCase();
|
||||
return conversations.value.filter(conv =>
|
||||
conv.title.toLowerCase().includes(query) ||
|
||||
(conv.gene_family && conv.gene_family.toLowerCase().includes(query))
|
||||
);
|
||||
});
|
||||
|
||||
const createNewConversation = () => {
|
||||
const newConv = {
|
||||
id: Date.now(),
|
||||
title: t('new-chat') + ' ' + new Date().toLocaleTimeString(),
|
||||
gene_family: null,
|
||||
message_count: 0
|
||||
};
|
||||
conversations.value.unshift(newConv);
|
||||
selectConversation(newConv);
|
||||
};
|
||||
|
||||
const selectConversation = (conv) => {
|
||||
currentConv.value = conv;
|
||||
// 清空消息并添加欢迎语
|
||||
messages.value = [{
|
||||
role: 'assistant',
|
||||
content: t('initial-welcome').replace('{title}', conv.title),
|
||||
time: new Date().toLocaleTimeString()
|
||||
}];
|
||||
};
|
||||
|
||||
// 分析参数
|
||||
const selectedStage = ref('');
|
||||
const params = reactive({
|
||||
prefix: 'Ft.SPL',
|
||||
cpu: 8
|
||||
});
|
||||
|
||||
// 消息
|
||||
const messages = ref([]);
|
||||
const userInput = ref('');
|
||||
|
||||
const sendMessage = () => {
|
||||
if (!userInput.value.trim()) return;
|
||||
|
||||
// 添加用户消息
|
||||
messages.value.push({
|
||||
role: 'user',
|
||||
content: userInput.value,
|
||||
time: new Date().toLocaleTimeString()
|
||||
});
|
||||
|
||||
// 更新当前会话消息数
|
||||
if (currentConv.value) {
|
||||
currentConv.value.message_count++;
|
||||
}
|
||||
|
||||
// 模拟AI回复
|
||||
setTimeout(() => {
|
||||
messages.value.push({
|
||||
role: 'assistant',
|
||||
content: `Received: "${userInput.value}". I will help analyze the gene family. Confirm parameters and click "${t('execute-analysis')}".`,
|
||||
time: new Date().toLocaleTimeString()
|
||||
});
|
||||
if (currentConv.value) {
|
||||
currentConv.value.message_count++;
|
||||
}
|
||||
}, 500);
|
||||
|
||||
userInput.value = '';
|
||||
};
|
||||
|
||||
// 分析阶段
|
||||
const stages = ref([
|
||||
{ name: 'identify', label: 'Identify', status: 'success', statusText: t('completed'), progress: 100 },
|
||||
{ name: 'phylogeny', label: 'Phylogeny', status: 'running', statusText: t('running'), progress: 60 },
|
||||
{ name: 'motif', label: 'Motif', status: 'pending', statusText: t('pending'), progress: 0 },
|
||||
{ name: 'domain', label: 'Domain', status: 'pending', statusText: t('pending'), progress: 0 },
|
||||
]);
|
||||
|
||||
const executeAnalysis = () => {
|
||||
if (!selectedStage.value) {
|
||||
ElementPlus.ElMessage.warning(t('msg-select-stage-first'));
|
||||
return;
|
||||
}
|
||||
ElementPlus.ElMessage.success(t('msg-executing') + selectedStage.value + t('msg-analysis-text'));
|
||||
};
|
||||
|
||||
return {
|
||||
t,
|
||||
conversations,
|
||||
currentConv,
|
||||
searchQuery,
|
||||
filteredConversations,
|
||||
createNewConversation,
|
||||
selectConversation,
|
||||
selectedStage,
|
||||
params,
|
||||
messages,
|
||||
userInput,
|
||||
sendMessage,
|
||||
stages,
|
||||
executeAnalysis
|
||||
};
|
||||
}
|
||||
});
|
||||
|
||||
app.use(ElementPlus);
|
||||
// 注册 i18n 翻译函数到 Vue 模板作用域
|
||||
app.config.globalProperties.t = window.t || ((key) => key);
|
||||
|
||||
// 注册图标
|
||||
for (const [key, component] of Object.entries(ElementPlusIconsVue)) {
|
||||
app.component(key, component);
|
||||
}
|
||||
|
||||
app.mount('#app');
|
||||
</script>
|
||||
</body>
|
||||
</html>
|
||||
+193
-13
@@ -1019,7 +1019,7 @@
|
||||
}
|
||||
|
||||
.execution-log-item.assistant .log-content.structured-content {
|
||||
/* 结构化内容使用rag样式 */
|
||||
font-size: 13px;
|
||||
}
|
||||
|
||||
.execution-log-item.assistant .log-content.short-content {
|
||||
@@ -1387,7 +1387,8 @@
|
||||
|
||||
<el-divider style="margin: 12px 0;"></el-divider>
|
||||
|
||||
<div v-if="false" style="padding:10px; background:#fff; border:1px solid #dcdfe6; border-radius:0px;">
|
||||
<div @dragover.prevent @drop.prevent="handleLightweightExtensionFolderDrop($event)"
|
||||
style="padding:10px; background:#fff; border:1px dashed #409EFF; border-radius:0px;">
|
||||
<div style="display:flex; align-items:center; justify-content:space-between; gap:8px; margin-bottom:8px;">
|
||||
<el-tooltip content="上传已跑通过的代码和测试数据；执行通过自然语言触发。" placement="top">
|
||||
<h4 style="margin:0; color:#303133; cursor:help;">拓展分析阶段</h4>
|
||||
@@ -1413,10 +1414,13 @@
|
||||
<span>名称</span><el-input v-model="extensionBuild.displayName" size="small" placeholder="例如 HMMER hmmsearch"></el-input>
|
||||
<span>原始命令</span><el-input v-model="extensionBuild.command" size="small" placeholder="例如 bash run.sh input.fa"></el-input>
|
||||
<span>环境</span>
|
||||
<el-select v-model="extensionBuild.runtimeEnv" size="small">
|
||||
<el-option label="test4py311" value="test4py311"></el-option>
|
||||
<el-option label="rnaseq" value="rnaseq"></el-option>
|
||||
<el-option label="rnaR" value="rnaR"></el-option>
|
||||
<el-select v-model="extensionBuild.runtimeEnv" size="small" filterable>
|
||||
<el-option
|
||||
v-for="env in extensionEnvOptions"
|
||||
:key="env"
|
||||
:label="env"
|
||||
:value="env">
|
||||
</el-option>
|
||||
</el-select>
|
||||
<span>原始代码</span><input type="file" multiple @change="onExtensionCodeFilesChange" style="font-size:12px; min-width:0;">
|
||||
<span v-if="extensionBuild.codeFiles.length"></span>
|
||||
@@ -1801,6 +1805,20 @@
|
||||
📂 Select
|
||||
</el-button>
|
||||
</div>
|
||||
<!-- lightWeightExtensionTest:start -->
|
||||
<div id="lightweight-extension-test-drop-zone"
|
||||
style="display:none;margin-top:8px;border:1px dashed #409EFF;padding:10px;font-size:12px;color:#606266;background:#f8fbff;"
|
||||
@dragover.prevent
|
||||
@drop.prevent="handleLightweightExtensionFolderDrop($event)">
|
||||
<div style="font-weight:600;color:#303133;">拖入固定结构拓展包</div>
|
||||
<div style="margin-top:4px;line-height:1.5;">要求包含 raw_code/run.sh 与 raw_test_data/，系统会自动创建 Job、解析环境并开始 lightweight upload。</div>
|
||||
<input id="lightweight-extension-test-folder-input" type="file" webkitdirectory directory multiple style="display:none" @change="handleLightweightExtensionFolderPick($event)">
|
||||
<div style="display:flex;justify-content:space-between;align-items:center;gap:8px;margin-top:8px;">
|
||||
<span>{{ lightweightExtensionTestStatus }}</span>
|
||||
<el-button size="small" type="success" @click="openLightweightExtensionFolderPicker">选择文件夹</el-button>
|
||||
</div>
|
||||
</div>
|
||||
<!-- lightWeightExtensionTest:end -->
|
||||
</div>
|
||||
</div>
|
||||
|
||||
@@ -7955,6 +7973,7 @@ RNA-seq KEGG/fgsea 会优先使用物种级 KEGG gene set；没有物种级缓
|
||||
working_dir: '',
|
||||
output_dir: ''
|
||||
});
|
||||
const lightweightExtensionTestStatus = ref('拖入固定结构文件夹，系统将自动创建 Job、解析环境并开始 upload。');
|
||||
const activeRnaseqScopeId = ref('');
|
||||
const activeGenotypeScopeId = ref('');
|
||||
|
||||
@@ -8131,6 +8150,7 @@ RNA-seq KEGG/fgsea 会优先使用物种级 KEGG gene set；没有物种级缓
|
||||
pop_snp_density: 'SNP密度分析',
|
||||
rnaseq_de: 'RNA-seq DE',
|
||||
combo: '组合图',
|
||||
gene_family_report: '基因家族结果报告',
|
||||
reference_classification: '参考亚家族分类',
|
||||
subfamily_confirm: '亚家族标签确认',
|
||||
ppi_string_reference_confirmation: 'Confirm the STRING reference species for PPI',
|
||||
@@ -9310,6 +9330,7 @@ RNA-seq KEGG/fgsea 会优先使用物种级 KEGG gene set；没有物种级缓
|
||||
statusDialogVisible: false,
|
||||
statusEvents: []
|
||||
});
|
||||
const extensionEnvOptions = ref(['test4py311', 'rnaseq', 'rnaR']);
|
||||
const lightweightExtensions = ref([]);
|
||||
const lightweightExtensionConversation = reactive({
|
||||
cards: [],
|
||||
@@ -10300,6 +10321,7 @@ compare: [[flesh, peel]]`;
|
||||
{ name: 'pep', label: '1️⃣2️⃣ PEP', status: 'pending', images: [], files: [], elapsed_time: 0 },
|
||||
{ name: 'expression', label: '1️⃣3️⃣ Expression (FPKM)', status: 'pending', images: [], files: [], elapsed_time: 0 },
|
||||
{ name: 'combo', label: '6️⃣ Combo', status: 'pending', images: [], files: [], elapsed_time: 0 },
|
||||
{ name: 'gene_family_report', label: '📄 基因家族结果报告', status: 'pending', images: [], files: [], elapsed_time: 0 },
|
||||
// RNA-seq stages
|
||||
{ name: 'rnaseq_qc', label: '1️⃣5️⃣ RNA-seq QC', status: 'pending', images: [], files: [], elapsed_time: 0 },
|
||||
{ name: 'rnaseq_align', label: '1️⃣6️⃣ RNA-seq Align', status: 'pending', images: [], files: [], elapsed_time: 0 },
|
||||
@@ -15499,6 +15521,54 @@ compare: [[flesh, peel]]`;
|
||||
return `⏸️ 批量执行已暂停：成功 ${completedCount}/${totalCount}，暂停 ${pausedCount}/${totalCount}。真实原因：${reasonText}。`;
|
||||
};
|
||||
|
||||
const openGeneratedGeneFamilyReport = async () => {
|
||||
await refreshResults(jobInfo.job_id, 'gene_family_report');
|
||||
const reportStage = stages.find(stage => stage.name === 'gene_family_report');
|
||||
const reportFile = (reportStage?.files || []).find(file =>
|
||||
file.role === 'gene_family_report' || String(file.name || '').endsWith('.gene_family_report.md')
|
||||
);
|
||||
if (!reportFile) return false;
|
||||
rightPanelTab.value = 'results';
|
||||
selectFile('gene_family_report', reportFile);
|
||||
return true;
|
||||
};
|
||||
|
||||
const submitGeneFamilyReportForBatch = async (stages, pausedCount) => {
|
||||
if (pausedCount > 0) return false;
|
||||
const plannedIds = (stages || []).map(stage => getStageId(stage)).filter(
|
||||
stageId => stageId && !['summary', 'gene_family_report', 'subfamily_confirm'].includes(stageId)
|
||||
);
|
||||
const geneFamilyStages = new Set([
|
||||
'identify', 'phylogeny', 'motif', 'domain', 'structure', 'promoter',
|
||||
'synteny', 'interspecies_synteny', 'karyotype', 'combo', 'ppi', 'expression', 'pep'
|
||||
]);
|
||||
if (!plannedIds.some(stageId => geneFamilyStages.has(stageId))) return false;
|
||||
const stageStatuses = Object.fromEntries(plannedIds.map(stageId => {
|
||||
const status = stageExecutionStatus.value[stageId];
|
||||
return [stageId, status === 'completed' ? 'success' : status === 'failed' ? 'failed' : 'missing'];
|
||||
}));
|
||||
const batchParams = batchExecuteParams.value || {};
|
||||
const planParams = batchParams.plan?.params || {};
|
||||
const stageParams = (stages || []).find(stage => stage && typeof stage === 'object' && stage.params)?.params || {};
|
||||
try {
|
||||
await executeSingleStageWithParams('gene_family_report', {
|
||||
expectedStages: plannedIds,
|
||||
stageStatuses,
|
||||
reportAction: 'generate',
|
||||
reportUseModel: true,
|
||||
scopeId: batchParams.scopeId || planParams.scopeId || stageParams.scopeId || '',
|
||||
analysisRoute: batchParams.analysisRoute || planParams.analysisRoute || stageParams.analysisRoute || '',
|
||||
memberSetId: batchParams.memberSetId || planParams.memberSetId || stageParams.memberSetId || '',
|
||||
rnaseqScopeId: batchParams.rnaseqScopeId || planParams.rnaseqScopeId || stageParams.rnaseqScopeId || ''
|
||||
});
|
||||
addAgentMessage('assistant', '📄 基因家族结果报告已生成。');
|
||||
return true;
|
||||
} catch (err) {
|
||||
addAgentMessage('assistant', `⚠️ 基因家族结果报告生成失败：${err.message || err}`);
|
||||
return false;
|
||||
}
|
||||
};
|
||||
|
||||
const confirmAndStartBatchExecute = async (event) => {
|
||||
if (!event?.isTrusted) return;
|
||||
batchExecutionUserConfirmed.value = true;
|
||||
@@ -15616,6 +15686,7 @@ compare: [[flesh, peel]]`;
|
||||
}).length;
|
||||
const totalCount = stages.length;
|
||||
|
||||
let continuationOpened = false;
|
||||
if (failedCount > 0) {
|
||||
addAgentMessage('assistant', `⚠️ 批量执行完成：成功 ${completedCount}/${totalCount}，失败 ${failedCount}/${totalCount}`);
|
||||
} else if (pausedCount > 0) {
|
||||
@@ -15623,13 +15694,16 @@ compare: [[flesh, peel]]`;
|
||||
} else {
|
||||
addAgentMessage('assistant', `🎉 批量执行完成！成功: ${completedCount}/${totalCount}`);
|
||||
if (isMethodologyDataPreparationContinuationCandidate(stages, completedCount, totalCount, failedCount, pausedCount)) {
|
||||
await openMethodologyDataPreparationContinuation();
|
||||
continuationOpened = await openMethodologyDataPreparationContinuation();
|
||||
} else if (isMethodologyPostConfirmContinuationCandidate(stages, completedCount, totalCount, failedCount, pausedCount)) {
|
||||
await openMethodologyPostConfirmContinuation();
|
||||
continuationOpened = await openMethodologyPostConfirmContinuation();
|
||||
} else if (isContextualPostConfirmContinuationCandidate(stages, completedCount, totalCount, failedCount, pausedCount)) {
|
||||
await openContextualPostConfirmContinuation();
|
||||
continuationOpened = await openContextualPostConfirmContinuation();
|
||||
}
|
||||
}
|
||||
if (pausedCount === 0 && !continuationOpened) {
|
||||
await submitGeneFamilyReportForBatch(stages, pausedCount);
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
@@ -18023,6 +18097,16 @@ compare: [[flesh, peel]]`;
|
||||
requestBody.geoId = confirmParams.geoId || '';
|
||||
requestBody.idTransform = confirmParams.idTransform || 'remove_T01';
|
||||
}
|
||||
if (stageName === 'gene_family_report') {
|
||||
requestBody.expectedStages = activeStageParams.expectedStages || [];
|
||||
requestBody.stageStatuses = activeStageParams.stageStatuses || {};
|
||||
requestBody.reportAction = activeStageParams.reportAction || 'generate';
|
||||
requestBody.reportUseModel = activeStageParams.reportUseModel !== false;
|
||||
requestBody.scopeId = activeStageParams.scopeId || '';
|
||||
requestBody.analysisRoute = activeStageParams.analysisRoute || '';
|
||||
requestBody.memberSetId = activeStageParams.memberSetId || '';
|
||||
requestBody.rnaseqScopeId = activeStageParams.rnaseqScopeId || '';
|
||||
}
|
||||
if (stageName === 'promoter_plot_revise') {
|
||||
const elements = Array.isArray(confirmParams.promoterElements) ? confirmParams.promoterElements : [];
|
||||
const categories = Array.isArray(confirmParams.promoterCategories) ? confirmParams.promoterCategories : [];
|
||||
@@ -18113,6 +18197,9 @@ compare: [[flesh, peel]]`;
|
||||
} else if (data.async === false) {
|
||||
// 同步执行完成，直接返回结果
|
||||
console.log(`[DEBUG-EXEC] ${stageName}: sync completed`);
|
||||
if (stageName === 'gene_family_report') {
|
||||
await openGeneratedGeneFamilyReport();
|
||||
}
|
||||
return data;
|
||||
} else {
|
||||
throw createStructuredExecuteError(data);
|
||||
@@ -19381,6 +19468,9 @@ compare: [[flesh, peel]]`;
|
||||
result: data
|
||||
});
|
||||
await handleStageCompleted(stageName, data, {});
|
||||
if (stageName === 'gene_family_report') {
|
||||
await openGeneratedGeneFamilyReport();
|
||||
}
|
||||
|
||||
// 更新阶段结果 - 如果有分stage的文件，则更新所有stage的文件
|
||||
if (stageIdx >= 0 && data.result) {
|
||||
@@ -19949,6 +20039,10 @@ compare: [[flesh, peel]]`;
|
||||
};
|
||||
|
||||
const extensionFileKey = (file) => `${file?.name || ''}::${file?.size || 0}::${file?.lastModified || 0}`;
|
||||
const extensionUploadPath = (file) => {
|
||||
const relative = String(file?.lightweightRelativePath || '').trim().replace(/^\/+/, '');
|
||||
return relative || String(file?.name || '').trim();
|
||||
};
|
||||
const appendExtensionFiles = (target, files) => {
|
||||
const current = Array.isArray(target) ? target : [];
|
||||
const merged = [...current];
|
||||
@@ -19974,6 +20068,53 @@ compare: [[flesh, peel]]`;
|
||||
if (selected.length) ElMessage.success(`已选择 ${selected.length} 个测试数据文件`);
|
||||
event.target.value = '';
|
||||
};
|
||||
const handleLightweightExtensionFolderDrop = (event) => {
|
||||
const droppedFiles = Array.from(event?.dataTransfer?.files || []);
|
||||
if (!droppedFiles.length) {
|
||||
ElMessage.warning('未检测到可用文件');
|
||||
return;
|
||||
}
|
||||
|
||||
const codeExtPattern = /\.(py|r|sh|bash|pl|js|ts|java|c|cc|cpp|go|rs|jl|rb|m|smk|nf|ipynb)$/i;
|
||||
const dataExtPattern = /\.(fastq|fq|gz|fa|fasta|fna|faa|pep|cds|gff|gff3|gtf|csv|tsv|txt|xlsx|xls|vcf|sam|bam)$/i;
|
||||
|
||||
const normalized = droppedFiles.map((file) => {
|
||||
const relativePath = file.webkitRelativePath || file.name;
|
||||
if (!file.lightweightRelativePath) {
|
||||
Object.defineProperty(file, 'lightweightRelativePath', {
|
||||
value: relativePath,
|
||||
configurable: true
|
||||
});
|
||||
}
|
||||
return file;
|
||||
});
|
||||
|
||||
const codeFiles = [];
|
||||
const dataFiles = [];
|
||||
normalized.forEach((file) => {
|
||||
const filePath = extensionUploadPath(file).toLowerCase();
|
||||
if (codeExtPattern.test(filePath)) {
|
||||
codeFiles.push(file);
|
||||
} else if (dataExtPattern.test(filePath)) {
|
||||
dataFiles.push(file);
|
||||
} else {
|
||||
codeFiles.push(file);
|
||||
}
|
||||
});
|
||||
|
||||
extensionBuild.codeFiles = appendExtensionFiles(extensionBuild.codeFiles, codeFiles);
|
||||
extensionBuild.dataFiles = appendExtensionFiles(extensionBuild.dataFiles, dataFiles);
|
||||
|
||||
if (!extensionBuild.displayName) {
|
||||
const firstPath = normalized[0]?.webkitRelativePath || normalized[0]?.name || '';
|
||||
const folder = firstPath.includes('/') ? firstPath.split('/')[0] : '';
|
||||
if (folder) {
|
||||
extensionBuild.displayName = folder.replace(/[^a-zA-Z0-9_-]+/g, '_');
|
||||
}
|
||||
}
|
||||
|
||||
ElMessage.success(`已拖入 ${normalized.length} 个文件，已自动填充拓展包`);
|
||||
};
|
||||
const removeExtensionFile = (kind, file) => {
|
||||
const key = extensionFileKey(file);
|
||||
if (kind === 'code') {
|
||||
@@ -20006,9 +20147,10 @@ compare: [[flesh, peel]]`;
|
||||
};
|
||||
const extensionApiUrl = (path) => {
|
||||
const value = String(path || '');
|
||||
if (!value.startsWith('/api/extension-stages') && !value.startsWith('/api/extension-stage-runs')) return value;
|
||||
if (!value.startsWith('/api/extension-stages') && !value.startsWith('/api/extension-stage-runs') && !value.startsWith('/api/lightweight-extension-stages')) return value;
|
||||
const host = window.location.hostname || '127.0.0.1';
|
||||
return `${window.location.protocol}//${host}:7880${value}`;
|
||||
const port = window.location.port;
|
||||
return port ? `${window.location.protocol}//${host}:${port}${value}` : `${window.location.protocol}//${host}${value}`;
|
||||
};
|
||||
const extensionApiFetch = async (path, options = {}) => fetch(extensionApiUrl(path), options);
|
||||
const pushExtensionStatus = (message, type = 'info', showDialog = false) => {
|
||||
@@ -20369,9 +20511,10 @@ compare: [[flesh, peel]]`;
|
||||
form.append('extension_id', extensionId);
|
||||
if (hasCommand) form.append('original_command', extensionBuild.command);
|
||||
form.append('operation_token', token);
|
||||
extensionBuild.codeFiles.forEach(file => form.append('raw_code_files', file));
|
||||
extensionBuild.dataFiles.forEach(file => form.append('raw_data_files', file));
|
||||
extensionBuild.codeFiles.forEach(file => form.append('raw_code_files', file, extensionUploadPath(file)));
|
||||
extensionBuild.dataFiles.forEach(file => form.append('raw_data_files', file, extensionUploadPath(file)));
|
||||
if (hasDataPaths) form.append('raw_data_paths', extensionBuild.dataPaths);
|
||||
form.append('runtime_env', extensionBuild.runtimeEnv);
|
||||
const response = await extensionApiFetch('/api/lightweight-extension-stages/upload', { method: 'POST', body: form });
|
||||
if (!response.ok) throw new Error(await extensionApiError(response, '原始包可复现检查提交失败'));
|
||||
ElMessage.success('文件上传成功，已开始生成并验收');
|
||||
@@ -20616,6 +20759,18 @@ compare: [[flesh, peel]]`;
|
||||
console.warn('[lightweight extension] list failed', err);
|
||||
}
|
||||
};
|
||||
const loadExtensionEnvOptions = async () => {
|
||||
try {
|
||||
const response = await extensionApiFetch('/api/extension-stages/envs');
|
||||
if (!response.ok) return;
|
||||
const data = await response.json();
|
||||
if (data.success && Array.isArray(data.envs) && data.envs.length) {
|
||||
extensionEnvOptions.value = data.envs;
|
||||
}
|
||||
} catch (err) {
|
||||
console.warn('[extension env options] load failed', err);
|
||||
}
|
||||
};
|
||||
const answerLightweightExtensionHelp = async (message) => {
|
||||
const query = String(message || '');
|
||||
const matched = (lightweightExtensions.value || []).find(item => query.includes(item.extension_id));
|
||||
@@ -23857,6 +24012,7 @@ compare: [[flesh, peel]]`;
|
||||
startRuntimeMonitor();
|
||||
loadExtensionStages();
|
||||
loadLightweightExtensionStages();
|
||||
loadExtensionEnvOptions();
|
||||
resumeLightweightOperation();
|
||||
loadExtensionRuns();
|
||||
loadMethodologyJobs();
|
||||
@@ -24189,6 +24345,7 @@ compare: [[flesh, peel]]`;
|
||||
intentHistory,
|
||||
uploadedFiles,
|
||||
extensionBuild,
|
||||
extensionEnvOptions,
|
||||
extensionStages,
|
||||
extensionCompletedStages,
|
||||
lightweightExtensionConversation,
|
||||
@@ -24207,6 +24364,7 @@ compare: [[flesh, peel]]`;
|
||||
extensionFileKey,
|
||||
onExtensionCodeFilesChange,
|
||||
onExtensionDataFilesChange,
|
||||
handleLightweightExtensionFolderDrop,
|
||||
removeExtensionFile,
|
||||
buildExtensionStage,
|
||||
confirmLightweightCandidate,
|
||||
@@ -24226,6 +24384,7 @@ compare: [[flesh, peel]]`;
|
||||
validateExtensionStage,
|
||||
publishExtensionStage,
|
||||
loadExtensionStages,
|
||||
loadExtensionEnvOptions,
|
||||
loadExtensionRuns,
|
||||
runExtensionStage,
|
||||
runExtensionStageFromIntent,
|
||||
@@ -24345,6 +24504,24 @@ compare: [[flesh, peel]]`;
|
||||
openPreview,
|
||||
redrawImage,
|
||||
createNewJob,
|
||||
lightweightExtensionTestStatus,
|
||||
handleLightweightExtensionFolderDrop: (event) => window.LightWeightExtensionTest && window.LightWeightExtensionTest.handleDrop({
|
||||
jobInfo,
|
||||
extensionBuild,
|
||||
createNewJob,
|
||||
appendExtensionFiles,
|
||||
buildLightweightExtensionStage,
|
||||
lightweightExtensionTestStatus,
|
||||
}, event),
|
||||
handleLightweightExtensionFolderPick: (event) => window.LightWeightExtensionTest && window.LightWeightExtensionTest.handlePick({
|
||||
jobInfo,
|
||||
extensionBuild,
|
||||
createNewJob,
|
||||
appendExtensionFiles,
|
||||
buildLightweightExtensionStage,
|
||||
lightweightExtensionTestStatus,
|
||||
}, event),
|
||||
openLightweightExtensionFolderPicker: () => window.LightWeightExtensionTest && window.LightWeightExtensionTest.openPicker(),
|
||||
// Working DirectorySelect
|
||||
existingJobs,
|
||||
jobSelectorVisible,
|
||||
@@ -24461,6 +24638,9 @@ compare: [[flesh, peel]]`;
|
||||
document.getElementById('app').style.display = 'block';
|
||||
console.log('App mounted successfully');
|
||||
</script>
|
||||
<!-- lightWeightExtensionTest:wiring:start -->
|
||||
<script src="/lightWeightExtensionTest.js"></script>
|
||||
<!-- lightWeightExtensionTest:wiring:end -->
|
||||
<!-- 深度解读弹窗样式 -->
|
||||
<style>
|
||||
.interpretation-dialog .el-dialog__body { padding: 0; max-height: 70vh; overflow-y: auto; }
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
Executable
+712
@@ -0,0 +1,712 @@
|
||||
<!DOCTYPE html>
|
||||
<html lang="zh-CN">
|
||||
<head>
|
||||
<meta charset="UTF-8">
|
||||
<meta name="viewport" content="width=device-width, initial-scale=1.0">
|
||||
<title>Knowledge Graph</title>
|
||||
<link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/element-plus@2.7.1/dist/index.css">
|
||||
<script src="https://cdn.jsdelivr.net/npm/vue@3/dist/vue.global.prod.js"></script>
|
||||
<script src="https://cdn.jsdelivr.net/npm/element-plus@2.7.1/dist/index.full.min.js"></script>
|
||||
<script src="https://cdn.jsdelivr.net/npm/@element-plus/icons-vue"></script>
|
||||
<script src="https://cdn.jsdelivr.net/npm/echarts@5.4.3/dist/echarts.min.js"></script>
|
||||
<script src="/static/i18n.js"></script>
|
||||
<style>
|
||||
body { margin: 0; font-family: 'Helvetica Neue', Arial, sans-serif; background: #f5f7fa; }
|
||||
.header { background: linear-gradient(135deg, #667eea 0%, #764ba2 100%); color: white; padding: 15px 20px; display: flex; align-items: center; justify-content: space-between; }
|
||||
.header h1 { margin: 0; font-size: 22px; }
|
||||
.header .subtitle { font-size: 12px; opacity: 0.8; margin-top: 4px; }
|
||||
.main-container { display: flex; padding: 15px; gap: 15px; height: calc(100vh - 70px); }
|
||||
.left-panel { width: 300px; display: flex; flex-direction: column; gap: 10px; }
|
||||
.control-section { background: white; border-radius: 8px; padding: 15px; box-shadow: 0 2px 8px rgba(0,0,0,0.08); }
|
||||
.control-section h4 { margin: 0 0 10px 0; color: #409EFF; font-size: 14px; border-bottom: 2px solid #409EFF; padding-bottom: 8px; }
|
||||
.stat-item { display: flex; justify-content: space-between; padding: 8px 0; border-bottom: 1px solid #eee; }
|
||||
.stat-item:last-child { border-bottom: none; }
|
||||
.stat-label { color: #666; }
|
||||
.stat-value { font-weight: bold; color: #409EFF; }
|
||||
.filter-section { margin-top: 10px; }
|
||||
.filter-tag { margin: 4px; cursor: pointer; }
|
||||
.filter-tag.active { background: #409EFF; color: white; }
|
||||
.main-panel { flex: 1; display: flex; flex-direction: column; background: white; border-radius: 8px; box-shadow: 0 2px 8px rgba(0,0,0,0.08); overflow: hidden; }
|
||||
.toolbar { padding: 10px 15px; border-bottom: 1px solid #eee; display: flex; align-items: center; gap: 10px; }
|
||||
#graph-container { flex: 1; position: relative; }
|
||||
.right-panel { width: 350px; background: white; border-radius: 8px; box-shadow: 0 2px 8px rgba(0,0,0,0.08); padding: 15px; overflow-y: auto; }
|
||||
.right-panel h4 { margin: 0 0 10px 0; color: #67C23A; border-bottom: 2px solid #67C23A; padding-bottom: 8px; }
|
||||
.node-detail { padding: 10px; background: #f5f7fa; border-radius: 6px; margin-top: 10px; }
|
||||
.node-detail .label { color: #666; font-size: 12px; margin-bottom: 4px; }
|
||||
.node-detail .value { font-weight: 500; color: #333; }
|
||||
.relation-list { margin-top: 10px; }
|
||||
.relation-item { padding: 8px; background: #f0f9eb; border-radius: 4px; margin-bottom: 8px; font-size: 13px; }
|
||||
.relation-item .source { color: #409EFF; font-weight: 500; }
|
||||
.relation-item .rel { color: #67C23A; margin: 0 4px; }
|
||||
.relation-item .target { color: #E6A23C; font-weight: 500; }
|
||||
.search-box { margin-bottom: 10px; }
|
||||
.legend { display: flex; flex-wrap: wrap; gap: 8px; margin-top: 10px; }
|
||||
.legend-item { display: flex; align-items: center; gap: 4px; font-size: 12px; }
|
||||
.legend-color { width: 12px; height: 12px; border-radius: 50%; }
|
||||
.legend-symbol { width: 12px; height: 12px; border-radius: 2px; }
|
||||
.legend-line { width: 20px; height: 2px; }
|
||||
|
||||
/* PC语义分类样式 */
|
||||
.pc-category-header {
|
||||
font-size: 11px;
|
||||
color: #666;
|
||||
font-weight: bold;
|
||||
margin: 8px 0 4px 0;
|
||||
padding-left: 4px;
|
||||
border-left: 3px solid #409EFF;
|
||||
}
|
||||
</style>
|
||||
</head>
|
||||
<body>
|
||||
<div id="app">
|
||||
<div class="header">
|
||||
<div>
|
||||
<h1>{{ t('kg-visualization') }}</h1>
|
||||
<div class="subtitle">{{ t('kg-subtitle') }}</div>
|
||||
</div>
|
||||
<el-button type="primary" @click="goBack">
|
||||
<el-icon><arrow-left /></el-icon> {{ t('back-to-main') }}
|
||||
</el-button>
|
||||
</div>
|
||||
|
||||
<div class="main-container">
|
||||
<!-- 左侧面板 -->
|
||||
<div class="left-panel">
|
||||
<div class="control-section">
|
||||
<h4>{{ t('kg-stats') }}</h4>
|
||||
<div class="stat-item">
|
||||
<span class="stat-label">{{ t('node-count') }}</span>
|
||||
<span class="stat-value">{{ stats.nodes }}</span>
|
||||
</div>
|
||||
<div class="stat-item">
|
||||
<span class="stat-label">{{ t('edge-count') }}</span>
|
||||
<span class="stat-value">{{ stats.edges }}</span>
|
||||
</div>
|
||||
<div class="stat-item">
|
||||
<span class="stat-label">{{ t('node-types') }}</span>
|
||||
<span class="stat-value">{{ stats.nodeTypes }}</span>
|
||||
</div>
|
||||
<div class="stat-item">
|
||||
<span class="stat-label">{{ t('edge-types') }}</span>
|
||||
<span class="stat-value">{{ stats.edgeTypes }}</span>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<div class="control-section">
|
||||
<h4>{{ t('node-search') }}</h4>
|
||||
<el-input
|
||||
v-model="searchQuery"
|
||||
:placeholder="t('enter-gene-name')"
|
||||
clearable
|
||||
@keyup.enter="searchNode"
|
||||
>
|
||||
<template #append>
|
||||
<el-button @click="searchNode">
|
||||
<el-icon><search /></el-icon>
|
||||
</el-button>
|
||||
</template>
|
||||
</el-input>
|
||||
</div>
|
||||
|
||||
<div class="control-section">
|
||||
<h4>{{ t('relation-filter-pc') }}</h4>
|
||||
<div class="filter-section">
|
||||
<div v-for="(types, category) in relationTypesByCategory" :key="category" style="margin-bottom: 10px;">
|
||||
<div style="font-size: 12px; color: #666; margin-bottom: 5px; font-weight: bold;">
|
||||
{{ category === 'activation' ? t('activation-induction') :
|
||||
category === 'repression' ? t('repression-inhibition') :
|
||||
category === 'regulation' ? t('regulation-control') :
|
||||
category === 'expression' ? t('expression-detection') :
|
||||
category === 'association' ? t('association-interaction') :
|
||||
category === 'localization' ? t('localization') :
|
||||
category === 'containment' ? t('containment-composition') :
|
||||
category === 'participation' ? t('participation-function') : t('other-rel') }}
|
||||
</div>
|
||||
<el-tag
|
||||
v-for="type in types"
|
||||
:key="type"
|
||||
class="filter-tag"
|
||||
:class="{ active: selectedRelations.includes(type) }"
|
||||
@click="toggleRelationFilter(type)"
|
||||
size="small"
|
||||
:style="{ borderColor: relationEdgeStyles[category].color, color: selectedRelations.includes(type) ? '#fff' : relationEdgeStyles[category].color }"
|
||||
>
|
||||
{{ type }} ({{ relationCounts[type] }})
|
||||
</el-tag>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<div class="control-section">
|
||||
<h4>{{ t('node-legend-pc') }}</h4>
|
||||
<div class="pc-category-header">Gene/Protein</div>
|
||||
<div class="legend">
|
||||
<div class="legend-item" v-for="type in ['gene', 'gene_id', 'gene_group', 'gene_family']" :key="type">
|
||||
<div class="legend-symbol" :style="{ background: nodeColors[type] }"></div>
|
||||
<span>{{ nodeTypeLabels[type] }}</span>
|
||||
</div>
|
||||
</div>
|
||||
<div class="pc-category-header">Phenotype</div>
|
||||
<div class="legend">
|
||||
<div class="legend-item" v-for="type in ['phenotype', 'attribute']" :key="type">
|
||||
<div class="legend-symbol" :style="{ background: nodeColors[type] }"></div>
|
||||
<span>{{ nodeTypeLabels[type] }}</span>
|
||||
</div>
|
||||
</div>
|
||||
<div class="pc-category-header">Cell/Organ/Organism</div>
|
||||
<div class="legend">
|
||||
<div class="legend-item" v-for="type in ['tissue', 'species']" :key="type">
|
||||
<div class="legend-symbol" :style="{ background: nodeColors[type] }"></div>
|
||||
<span>{{ nodeTypeLabels[type] }}</span>
|
||||
</div>
|
||||
</div>
|
||||
<div class="pc-category-header">Biological Process</div>
|
||||
<div class="legend">
|
||||
<div class="legend-item" v-for="type in ['process', 'time', 'condition', 'stress']" :key="type">
|
||||
<div class="legend-symbol" :style="{ background: nodeColors[type] }"></div>
|
||||
<span>{{ nodeTypeLabels[type] }}</span>
|
||||
</div>
|
||||
</div>
|
||||
<div class="pc-category-header">Genomic</div>
|
||||
<div class="legend">
|
||||
<div class="legend-item" v-for="type in ['location', 'sra_dataset', 'data_type', 'count']" :key="type">
|
||||
<div class="legend-symbol" :style="{ background: nodeColors[type] }"></div>
|
||||
<span>{{ nodeTypeLabels[type] }}</span>
|
||||
</div>
|
||||
</div>
|
||||
<h4 style="margin-top: 15px;">🔗 {{ t('edge-legend-pc') }}</h4>
|
||||
<div class="legend">
|
||||
<div class="legend-item" v-for="(style, cat) in relationEdgeStyles" :key="cat">
|
||||
<div class="legend-line" :style="{ background: style.color, height: style.width + 'px', borderTop: style.type === 'dashed' ? '2px dashed ' + style.color : 'none' }"></div>
|
||||
<span>{{ cat === 'activation' ? 'Activation/Induction' :
|
||||
cat === 'repression' ? 'Repression/Inhibition' :
|
||||
cat === 'regulation' ? 'Regulation/Control' :
|
||||
cat === 'expression' ? 'Expression/Detection' :
|
||||
cat === 'association' ? 'Association/Interaction' :
|
||||
cat === 'localization' ? 'Localization' :
|
||||
cat === 'containment' ? 'Containment/Composition' :
|
||||
cat === 'participation' ? 'Participation/Function' : 'Other' }}</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- 主面板 -->
|
||||
<div class="main-panel">
|
||||
<div class="toolbar">
|
||||
<el-button-group>
|
||||
<el-button @click="fitGraph">
|
||||
<el-icon><full-screen /></el-icon> {{ t('fit-view') }}
|
||||
</el-button>
|
||||
<el-button @click="resetFilters">
|
||||
<el-icon><refresh /></el-icon> {{ t('reset-filters') }}
|
||||
</el-button>
|
||||
</el-button-group>
|
||||
<el-divider direction="vertical"></el-divider>
|
||||
<span style="color: #666; font-size: 13px;">
|
||||
{{ t('click-drag-hint') }}
|
||||
</span>
|
||||
</div>
|
||||
<div id="graph-container"></div>
|
||||
</div>
|
||||
|
||||
<!-- 右侧面板 -->
|
||||
<div class="right-panel">
|
||||
<h4>{{ t('node-detail') }}</h4>
|
||||
<div v-if="selectedNode" class="node-detail">
|
||||
<div style="margin-bottom: 15px;">
|
||||
<div class="label">{{ t('node-name') }}</div>
|
||||
<div class="value" style="font-size: 18px; color: #409EFF;">{{ selectedNode.name }}</div>
|
||||
</div>
|
||||
<div style="margin-bottom: 15px;">
|
||||
<div class="label">{{ t('node-type-pc') }}</div>
|
||||
<div class="value">
|
||||
<el-tag :type="getNodeTypeTag(selectedNode.category)" :style="{ backgroundColor: nodeColors[selectedNode.category] + '20', borderColor: nodeColors[selectedNode.category], color: nodeColors[selectedNode.category] }">
|
||||
{{ nodeTypeLabels[selectedNode.category] || selectedNode.category }}
|
||||
</el-tag>
|
||||
</div>
|
||||
</div>
|
||||
<div>
|
||||
<div class="label">{{ t('connection-count') }}</div>
|
||||
<div class="value">{{ selectedNode.degree }}{{ t('num-connections') }}</div>
|
||||
</div>
|
||||
</div>
|
||||
<div v-else style="color: #999; text-align: center; padding: 40px;">
|
||||
{{ t('click-node-detail') }}
|
||||
</div>
|
||||
|
||||
<template v-if="selectedNodeRelations.length > 0">
|
||||
<h4 style="margin-top: 20px;">🔗 {{ t('related-relations') }} ({{ selectedNodeRelations.length }})</h4>
|
||||
<div class="relation-list">
|
||||
<div
|
||||
v-for="rel in selectedNodeRelations.slice(0, 10)"
|
||||
:key="rel.id"
|
||||
class="relation-item"
|
||||
:style="{ borderLeft: '3px solid ' + relationEdgeStyles[rel.category || relationCategories[rel.name] || 'other'].color }"
|
||||
>
|
||||
<span class="source">{{ rel.source }}</span>
|
||||
<span class="rel" :style="{ color: relationEdgeStyles[rel.category || relationCategories[rel.name] || 'other'].color }">--{{ rel.name }}--></span>
|
||||
<span class="target">{{ rel.target }}</span>
|
||||
</div>
|
||||
<div v-if="selectedNodeRelations.length > 10" style="text-align: center; color: #999; padding: 10px;">
|
||||
{{ tp('more-relations', { count: selectedNodeRelations.length - 10 }) }}
|
||||
</div>
|
||||
</div>
|
||||
</template>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<script>
|
||||
const { createApp, ref, onMounted, computed } = Vue;
|
||||
const { ElMessage } = ElementPlus;
|
||||
|
||||
createApp({
|
||||
setup() {
|
||||
const t = window.t || ((key) => key);
|
||||
const tp = window.tp || ((key, params) => {
|
||||
let s = t(key);
|
||||
if (params) Object.keys(params).forEach(k => { s = s.replace('{' + k + '}', params[k]); });
|
||||
return s;
|
||||
});
|
||||
document.title = t('kg-title');
|
||||
const graphData = ref({ nodes: [], edges: [] });
|
||||
const chart = ref(null);
|
||||
const searchQuery = ref('');
|
||||
const selectedNode = ref(null);
|
||||
const selectedRelations = ref([]);
|
||||
|
||||
// PC (Pathway Commons) 语义分类颜色映射
|
||||
const nodeColors = {
|
||||
// Gene/Protein - 蓝色
|
||||
'gene': '#5DADE2',
|
||||
'gene_id': '#85C1E9',
|
||||
'gene_group': '#AED6F1',
|
||||
'gene_family': '#5DADE2',
|
||||
|
||||
// Phenotype - 绿色
|
||||
'phenotype': '#58D68D',
|
||||
'attribute': '#82E0AA',
|
||||
|
||||
// Cell/Organ/Organism - 粉色
|
||||
'tissue': '#F5B7B1',
|
||||
'species': '#F1948A',
|
||||
|
||||
// Process - 紫色菱形
|
||||
'process': '#AF7AC5',
|
||||
'time': '#C39BD3',
|
||||
'condition': '#D7BDE2',
|
||||
'stress': '#E8DAEF',
|
||||
|
||||
// Location - 浅绿色
|
||||
'location': '#82E0AA',
|
||||
|
||||
// Data - 橙色（更显眼）
|
||||
'sra_dataset': '#E67E22',
|
||||
'data_type': '#F39C12',
|
||||
'count': '#EAEDED',
|
||||
|
||||
'unknown': '#95A5A6'
|
||||
,
|
||||
'article': '#2ecc71',
|
||||
'paper_title': '#9b59b6'
|
||||
};
|
||||
|
||||
// PC 语义分类显示名称
|
||||
const nodeTypeLabels = {
|
||||
'gene': 'Gene/Protein',
|
||||
'gene_id': 'Gene Identifier',
|
||||
'gene_group': 'Gene Group',
|
||||
'gene_family': 'Gene Family',
|
||||
'phenotype': 'Phenotype',
|
||||
'attribute': 'Attribute',
|
||||
'tissue': 'Cell/Organ/Tissue',
|
||||
'species': 'Organism',
|
||||
'process': 'Biological Process',
|
||||
'time': 'Time/Stage',
|
||||
'condition': 'Condition',
|
||||
'stress': 'Stress',
|
||||
'location': 'Genomic Location',
|
||||
'sra_dataset': 'SRA Dataset',
|
||||
'geo_dataset': 'GEO Dataset',
|
||||
'data_type': 'Data Type',
|
||||
'count': 'Count/Statistic',
|
||||
'article': 'Article (PMID)',
|
||||
'paper_title': 'Paper Title',
|
||||
'unknown': 'Other'
|
||||
};
|
||||
|
||||
// PC 关系类型分类
|
||||
const relationCategories = {
|
||||
// Activation/Induction - 绿色箭头
|
||||
'induces': 'activation',
|
||||
'promote': 'activation',
|
||||
'overexpression_increases': 'activation',
|
||||
'enhanced_tolerance_to': 'activation',
|
||||
|
||||
// Repression/Inhibition - 红色T型
|
||||
'down_regulated_during': 'repression',
|
||||
'down_regulation_improves': 'repression',
|
||||
|
||||
// Regulation - 蓝色
|
||||
'regulate': 'regulation',
|
||||
'regulates': 'regulation',
|
||||
'regulating': 'regulation',
|
||||
|
||||
// Expression - 橙色
|
||||
'expressed_in': 'expression',
|
||||
'expressed_during': 'expression',
|
||||
'was_expressed_during': 'expression',
|
||||
'expression_reached_peak_at': 'expression',
|
||||
|
||||
// Association - 紫色
|
||||
'collinear_with': 'association',
|
||||
'was_highly_orthologous_to': 'association',
|
||||
'related_to': 'association',
|
||||
'affect': 'association',
|
||||
|
||||
// Localization - 深绿
|
||||
'located_on': 'localization',
|
||||
'identified_in': 'localization',
|
||||
|
||||
// Containment - 青色
|
||||
'contain': 'containment',
|
||||
'had': 'containment',
|
||||
'has_gene_id': 'containment',
|
||||
'has_data_type': 'containment',
|
||||
|
||||
// Participation - 深红
|
||||
'involved_in': 'participation',
|
||||
'participate_in': 'participation',
|
||||
|
||||
'default': 'other'
|
||||
};
|
||||
|
||||
const relationEdgeStyles = {
|
||||
'activation': { color: '#27AE60', width: 2, type: 'solid' },
|
||||
'repression': { color: '#E74C3C', width: 2, type: 'solid' },
|
||||
'regulation': { color: '#3498DB', width: 2, type: 'solid' },
|
||||
'expression': { color: '#E67E22', width: 1.5, type: 'solid' },
|
||||
'association': { color: '#9B59B6', width: 1.5, type: 'dashed' },
|
||||
'localization': { color: '#16A085', width: 1.5, type: 'solid' },
|
||||
'containment': { color: '#1ABC9C', width: 1.5, type: 'solid' },
|
||||
'participation': { color: '#C0392B', width: 2, type: 'solid' },
|
||||
'other': { color: '#95A5A6', width: 1, type: 'solid' }
|
||||
};
|
||||
|
||||
const stats = computed(() => ({
|
||||
nodes: graphData.value.nodes.length,
|
||||
edges: graphData.value.edges.length,
|
||||
nodeTypes: Object.keys(nodeColors).length,
|
||||
edgeTypes: relationTypes.value.length
|
||||
}));
|
||||
|
||||
// 按 PC 语义分类的关系类型
|
||||
const relationTypesByCategory = computed(() => {
|
||||
const cats = {};
|
||||
graphData.value.edges.forEach(e => {
|
||||
const cat = relationCategories[e.relation] || 'other';
|
||||
if (!cats[cat]) cats[cat] = [];
|
||||
cats[cat].push(e.relation);
|
||||
});
|
||||
// 去重并排序
|
||||
for (const cat in cats) {
|
||||
cats[cat] = [...new Set(cats[cat])].sort();
|
||||
}
|
||||
return cats;
|
||||
});
|
||||
|
||||
const relationTypes = computed(() => {
|
||||
const types = new Set();
|
||||
graphData.value.edges.forEach(e => types.add(e.relation));
|
||||
return Array.from(types).sort();
|
||||
});
|
||||
|
||||
const relationCounts = computed(() => {
|
||||
const counts = {};
|
||||
graphData.value.edges.forEach(e => {
|
||||
counts[e.relation] = (counts[e.relation] || 0) + 1;
|
||||
});
|
||||
return counts;
|
||||
});
|
||||
|
||||
const selectedNodeRelations = computed(() => {
|
||||
if (!selectedNode.value) return [];
|
||||
return graphData.value.edges.filter(e =>
|
||||
e.source === selectedNode.value.id || e.target === selectedNode.value.id
|
||||
);
|
||||
});
|
||||
|
||||
const loadData = async () => {
|
||||
try {
|
||||
// 优先加载包含多组学数据的知识图谱
|
||||
let response = await fetch('knowledge_graph_with_omics.json');
|
||||
if (!response.ok) {
|
||||
// 回退到标准知识图谱
|
||||
response = await fetch('knowledge_graph.json');
|
||||
}
|
||||
if (!response.ok) {
|
||||
throw new Error(`HTTP ${response.status}: ${response.statusText}`);
|
||||
}
|
||||
const data = await response.json();
|
||||
|
||||
// 验证数据结构
|
||||
if (!data.nodes || !Array.isArray(data.nodes)) {
|
||||
throw new Error(t('err-data-format'));
|
||||
}
|
||||
if (!data.edges || !Array.isArray(data.edges)) {
|
||||
console.warn(t('warn-edges-undefined'));
|
||||
data.edges = [];
|
||||
}
|
||||
|
||||
// 计算节点度数
|
||||
const nodeDegrees = {};
|
||||
data.edges.forEach(e => {
|
||||
nodeDegrees[e.source] = (nodeDegrees[e.source] || 0) + 1;
|
||||
nodeDegrees[e.target] = (nodeDegrees[e.target] || 0) + 1;
|
||||
});
|
||||
|
||||
// 根据 PC 语义分类设置节点形状
|
||||
const getNodeSymbol = (type) => {
|
||||
const symbolMap = {
|
||||
'gene': 'circle',
|
||||
'gene_id': 'circle',
|
||||
'gene_group': 'circle',
|
||||
'gene_family': 'circle',
|
||||
'phenotype': 'rect',
|
||||
'attribute': 'rect',
|
||||
'tissue': 'roundRect',
|
||||
'species': 'roundRect',
|
||||
'process': 'diamond',
|
||||
'time': 'diamond',
|
||||
'condition': 'diamond',
|
||||
'stress': 'diamond',
|
||||
'location': 'triangle',
|
||||
'sra_dataset': 'pin',
|
||||
'data_type': 'pin',
|
||||
'count': 'pin'
|
||||
};
|
||||
return symbolMap[type] || 'circle';
|
||||
};
|
||||
|
||||
graphData.value = {
|
||||
nodes: data.nodes.map(n => ({
|
||||
id: n.id,
|
||||
name: n.id,
|
||||
category: n.type || 'unknown',
|
||||
degree: nodeDegrees[n.id] || 0,
|
||||
symbol: getNodeSymbol(n.type),
|
||||
symbolSize: (n.type === 'gene' ? 20 : n.type === 'sra_dataset' ? 18 : 12) + Math.min((nodeDegrees[n.id] || 0) * 0.3, 15),
|
||||
itemStyle: {
|
||||
color: nodeColors[n.type] || nodeColors.unknown,
|
||||
borderColor: '#fff',
|
||||
borderWidth: 1
|
||||
}
|
||||
})),
|
||||
edges: data.edges.map((e, i) => {
|
||||
const cat = relationCategories[e.relation] || 'other';
|
||||
const style = relationEdgeStyles[cat];
|
||||
return {
|
||||
id: i,
|
||||
source: e.source,
|
||||
target: e.target,
|
||||
name: e.relation,
|
||||
relation: e.relation,
|
||||
category: cat,
|
||||
lineStyle: {
|
||||
color: style.color,
|
||||
width: style.width,
|
||||
type: style.type,
|
||||
curveness: 0.1
|
||||
}
|
||||
};
|
||||
})
|
||||
};
|
||||
|
||||
initChart();
|
||||
ElMessage.success(t('msg-kg-loaded'));
|
||||
} catch (error) {
|
||||
ElMessage.error(t('msg-load-data-failed') + error.message);
|
||||
}
|
||||
};
|
||||
|
||||
const initChart = () => {
|
||||
const container = document.getElementById('graph-container');
|
||||
chart.value = echarts.init(container);
|
||||
|
||||
const option = {
|
||||
tooltip: {
|
||||
formatter: params => {
|
||||
if (params.dataType === 'node') {
|
||||
const pcType = nodeTypeLabels[params.data.category] || params.data.category;
|
||||
return `<b>${params.name}</b><br/>PC: ${pcType}<br/>${t('connection-count').replace('Connections', 'Deg')}: ${params.data.degree}`;
|
||||
}
|
||||
const cat = params.data.category || relationCategories[params.name] || 'other';
|
||||
const catName = cat === 'activation' ? 'Activation' :
|
||||
cat === 'repression' ? 'Repression' :
|
||||
cat === 'regulation' ? 'Regulation' :
|
||||
cat === 'expression' ? 'Expression' :
|
||||
cat === 'association' ? 'Association' :
|
||||
cat === 'localization' ? 'Localization' :
|
||||
cat === 'containment' ? 'Containment' :
|
||||
cat === 'participation' ? 'Participation' : 'Other';
|
||||
return `<b>${params.data.source}</b> <span style="color:${relationEdgeStyles[cat].color}">--${params.name}--></span> <b>${params.data.target}</b><br/><small>PC: ${catName}</small>`;
|
||||
}
|
||||
},
|
||||
series: [{
|
||||
type: 'graph',
|
||||
layout: 'force',
|
||||
data: graphData.value.nodes,
|
||||
links: graphData.value.edges,
|
||||
roam: true,
|
||||
draggable: true,
|
||||
label: {
|
||||
show: true,
|
||||
position: 'right',
|
||||
formatter: '{b}'
|
||||
},
|
||||
force: {
|
||||
repulsion: 300,
|
||||
gravity: 0.1,
|
||||
edgeLength: 100,
|
||||
layoutAnimation: true
|
||||
},
|
||||
emphasis: {
|
||||
focus: 'adjacency',
|
||||
lineStyle: { width: 4 }
|
||||
}
|
||||
}]
|
||||
};
|
||||
|
||||
chart.value.setOption(option);
|
||||
|
||||
chart.value.on('click', params => {
|
||||
if (params.dataType === 'node') {
|
||||
selectedNode.value = params.data;
|
||||
} else {
|
||||
selectedNode.value = null;
|
||||
}
|
||||
});
|
||||
|
||||
window.addEventListener('resize', () => chart.value.resize());
|
||||
};
|
||||
|
||||
const searchNode = () => {
|
||||
if (!searchQuery.value || !chart.value) return;
|
||||
|
||||
const node = graphData.value.nodes.find(n =>
|
||||
n.id.toLowerCase().includes(searchQuery.value.toLowerCase())
|
||||
);
|
||||
|
||||
if (node) {
|
||||
chart.value.dispatchAction({
|
||||
type: 'highlight',
|
||||
seriesIndex: 0,
|
||||
name: node.id
|
||||
});
|
||||
selectedNode.value = node;
|
||||
ElMessage.success(t('msg-node-found') + node.name);
|
||||
} else {
|
||||
ElMessage.warning(t('msg-node-not-found'));
|
||||
}
|
||||
};
|
||||
|
||||
const toggleRelationFilter = (type) => {
|
||||
const index = selectedRelations.value.indexOf(type);
|
||||
if (index > -1) {
|
||||
selectedRelations.value.splice(index, 1);
|
||||
} else {
|
||||
selectedRelations.value.push(type);
|
||||
}
|
||||
|
||||
if (selectedRelations.value.length === 0) {
|
||||
chart.value.setOption({
|
||||
series: [{ data: graphData.value.nodes, links: graphData.value.edges }]
|
||||
});
|
||||
} else {
|
||||
const filteredEdges = graphData.value.edges.filter(e =>
|
||||
selectedRelations.value.includes(e.relation)
|
||||
);
|
||||
const connectedNodes = new Set();
|
||||
filteredEdges.forEach(e => {
|
||||
connectedNodes.add(e.source);
|
||||
connectedNodes.add(e.target);
|
||||
});
|
||||
const filteredNodes = graphData.value.nodes.filter(n =>
|
||||
connectedNodes.has(n.id)
|
||||
);
|
||||
|
||||
chart.value.setOption({
|
||||
series: [{ data: filteredNodes, links: filteredEdges }]
|
||||
});
|
||||
}
|
||||
};
|
||||
|
||||
const fitGraph = () => {
|
||||
if (chart.value) {
|
||||
chart.value.dispatchAction({ type: 'restore' });
|
||||
}
|
||||
};
|
||||
|
||||
const resetFilters = () => {
|
||||
selectedRelations.value = [];
|
||||
selectedNode.value = null;
|
||||
searchQuery.value = '';
|
||||
if (chart.value) {
|
||||
chart.value.setOption({
|
||||
series: [{ data: graphData.value.nodes, links: graphData.value.edges }]
|
||||
});
|
||||
chart.value.dispatchAction({ type: 'restore' });
|
||||
}
|
||||
};
|
||||
|
||||
const getNodeTypeTag = (type) => {
|
||||
const typeMap = { 'gene': '', 'gene_id': 'success', 'tissue': 'warning', 'location': 'info' };
|
||||
return typeMap[type] || '';
|
||||
};
|
||||
|
||||
const goBack = () => {
|
||||
window.location.href = '/';
|
||||
};
|
||||
|
||||
onMounted(() => {
|
||||
loadData().then(() => {
|
||||
// 检查URL参数，如果有highlight则自动搜索高亮
|
||||
const urlParams = new URLSearchParams(window.location.search);
|
||||
const highlightEntity = urlParams.get('highlight');
|
||||
if (highlightEntity) {
|
||||
searchQuery.value = highlightEntity;
|
||||
setTimeout(() => {
|
||||
searchNode();
|
||||
}, 500); // 等待图表初始化完成
|
||||
}
|
||||
});
|
||||
});
|
||||
|
||||
return {
|
||||
t,
|
||||
tp,
|
||||
stats,
|
||||
searchQuery,
|
||||
selectedNode,
|
||||
selectedRelations,
|
||||
relationTypes,
|
||||
relationTypesByCategory,
|
||||
relationCounts,
|
||||
relationEdgeStyles,
|
||||
relationCategories,
|
||||
nodeTypeLabels,
|
||||
selectedNodeRelations,
|
||||
nodeColors,
|
||||
searchNode,
|
||||
toggleRelationFilter,
|
||||
fitGraph,
|
||||
resetFilters,
|
||||
getNodeTypeTag,
|
||||
goBack
|
||||
};
|
||||
}
|
||||
}).use(ElementPlus).mount('#app');
|
||||
</script>
|
||||
</body>
|
||||
</html>
|
||||
@@ -0,0 +1,304 @@
|
||||
(function () {
|
||||
const PY_EXTENSIONS = new Set(['.py']);
|
||||
const R_EXTENSIONS = new Set(['.r']);
|
||||
|
||||
function normalizedRelativePath(file) {
|
||||
const relative = String(file.webkitRelativePath || file.relativePath || file.name || '').replace(/^\/+/, '');
|
||||
return relative.split('\\').join('/');
|
||||
}
|
||||
|
||||
function parsePythonImports(content) {
|
||||
const imports = new Set();
|
||||
const lines = String(content || '').split(/\r?\n/);
|
||||
for (const line of lines) {
|
||||
let match = line.match(/^\s*import\s+([A-Za-z0-9_.,\s]+)/);
|
||||
if (match) {
|
||||
match[1].split(',').forEach((item) => {
|
||||
const token = item.trim().split(/\s+as\s+/i)[0].split('.')[0].trim();
|
||||
if (token) imports.add(token);
|
||||
});
|
||||
}
|
||||
match = line.match(/^\s*from\s+([A-Za-z0-9_.]+)\s+import\s+/);
|
||||
if (match) {
|
||||
const token = match[1].split('.')[0].trim();
|
||||
if (token) imports.add(token);
|
||||
}
|
||||
}
|
||||
return Array.from(imports);
|
||||
}
|
||||
|
||||
function parseRPackages(content) {
|
||||
const packages = new Set();
|
||||
const pattern = /(?:library|require)\(\s*["']?([A-Za-z0-9_.-]+)["']?\s*\)/g;
|
||||
let match;
|
||||
const text = String(content || '');
|
||||
while ((match = pattern.exec(text)) !== null) {
|
||||
if (match[1]) packages.add(match[1]);
|
||||
}
|
||||
return Array.from(packages);
|
||||
}
|
||||
|
||||
function commonPathPrefix(files) {
|
||||
const paths = files.map((f) => normalizedRelativePath(f).split('/')).filter((parts) => parts.length > 0);
|
||||
if (!paths.length) return '';
|
||||
const first = paths[0];
|
||||
let prefixLen = 0;
|
||||
for (let i = 0; i < first.length; i++) {
|
||||
if (!paths.every((parts) => parts[i] === first[i])) break;
|
||||
prefixLen = i + 1;
|
||||
}
|
||||
return first.slice(0, prefixLen).join('/');
|
||||
}
|
||||
|
||||
function sanitizeDisplayName(raw) {
|
||||
return String(raw || '').replace(/[^A-Za-z0-9_-]+/g, '_').replace(/^_+|_+$/g, '') || 'lightweight_extension';
|
||||
}
|
||||
|
||||
function extractRootName(files) {
|
||||
const prefix = commonPathPrefix(files);
|
||||
const base = (prefix && prefix !== 'raw_code' && prefix !== 'raw_test_data')
|
||||
? sanitizeDisplayName(prefix.split('/')[0])
|
||||
: 'lightweight_extension_drop';
|
||||
const ts = Date.now();
|
||||
return base + '_' + ts;
|
||||
}
|
||||
|
||||
function splitFixedStructure(files) {
|
||||
const codeFiles = [];
|
||||
const dataFiles = [];
|
||||
let hasRunScript = false;
|
||||
let prefix = commonPathPrefix(files);
|
||||
if (prefix && !prefix.endsWith('/')) prefix += '/';
|
||||
|
||||
const sampled = [];
|
||||
for (const file of files) {
|
||||
let relativePath = normalizedRelativePath(file);
|
||||
if (prefix && relativePath.startsWith(prefix)) {
|
||||
relativePath = relativePath.slice(prefix.length);
|
||||
}
|
||||
if (sampled.length < 10) sampled.push(relativePath);
|
||||
if (relativePath.startsWith('raw_code/')) {
|
||||
file.lightweightRelativePath = relativePath.slice('raw_code/'.length) || file.name;
|
||||
codeFiles.push(file);
|
||||
if (relativePath === 'raw_code/run.sh') {
|
||||
hasRunScript = true;
|
||||
}
|
||||
} else if (relativePath.startsWith('raw_test_data/')) {
|
||||
file.lightweightRelativePath = relativePath.slice('raw_test_data/'.length) || file.name;
|
||||
dataFiles.push(file);
|
||||
}
|
||||
}
|
||||
if (!codeFiles.length) {
|
||||
const preview = sampled.length ? sampled.slice(0, 10).join(', ') : '(无)';
|
||||
throw new Error('缺少 raw_code/ 目录（检测到的路径样例: ' + preview + '）');
|
||||
}
|
||||
if (!dataFiles.length) {
|
||||
throw new Error('缺少 raw_test_data/ 目录');
|
||||
}
|
||||
if (!hasRunScript) {
|
||||
throw new Error('缺少 raw_code/run.sh');
|
||||
}
|
||||
return { codeFiles, dataFiles };
|
||||
}
|
||||
|
||||
async function extractDependencies(files) {
|
||||
const pythonImports = new Set();
|
||||
const rPackages = new Set();
|
||||
for (const file of files) {
|
||||
const path = normalizedRelativePath(file);
|
||||
const lower = path.toLowerCase();
|
||||
const extension = lower.includes('.') ? lower.slice(lower.lastIndexOf('.')) : '';
|
||||
if (!PY_EXTENSIONS.has(extension) && !R_EXTENSIONS.has(extension)) {
|
||||
continue;
|
||||
}
|
||||
const content = await file.text();
|
||||
if (PY_EXTENSIONS.has(extension)) {
|
||||
parsePythonImports(content).forEach((name) => pythonImports.add(name));
|
||||
} else {
|
||||
parseRPackages(content).forEach((name) => rPackages.add(name));
|
||||
}
|
||||
}
|
||||
return {
|
||||
python_imports: Array.from(pythonImports),
|
||||
r_packages: Array.from(rPackages),
|
||||
};
|
||||
}
|
||||
|
||||
async function encodeBase64(file) {
|
||||
const buffer = await file.arrayBuffer();
|
||||
const bytes = new Uint8Array(buffer);
|
||||
let binary = '';
|
||||
const chunkSize = 0x8000;
|
||||
for (let index = 0; index < bytes.length; index += chunkSize) {
|
||||
binary += String.fromCharCode(...bytes.subarray(index, index + chunkSize));
|
||||
}
|
||||
return btoa(binary);
|
||||
}
|
||||
|
||||
async function importFolderToJob(hooks, rootName, files) {
|
||||
const payload = {
|
||||
job_id: String(hooks.jobInfo.job_id || '').trim(),
|
||||
root_name: rootName,
|
||||
files: [],
|
||||
relative_paths: [],
|
||||
};
|
||||
for (const file of files) {
|
||||
payload.files.push(await encodeBase64(file));
|
||||
payload.relative_paths.push(normalizedRelativePath(file));
|
||||
}
|
||||
const response = await fetch('/api/job/import-folder', {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify(payload),
|
||||
});
|
||||
const data = await response.json();
|
||||
if (!response.ok || !data.success) {
|
||||
throw new Error(data.detail || data.error || data.message || 'Job 导入失败');
|
||||
}
|
||||
return data;
|
||||
}
|
||||
|
||||
async function resolveRuntimeEnv(files) {
|
||||
const dependencies = await extractDependencies(files);
|
||||
console.log('[lightWeightExtensionTest] 提取的依赖:', JSON.stringify(dependencies), '| 扫描文件数:', files.length);
|
||||
try {
|
||||
const response = await fetch('/api/extension-stages/envs/resolve', {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify(dependencies),
|
||||
});
|
||||
const data = await response.json();
|
||||
console.log('[lightWeightExtensionTest] 后端 env/resolve 原始响应:', response.status, JSON.stringify(data).slice(0, 500));
|
||||
if (!response.ok || !data.success) {
|
||||
throw new Error(data.detail || data.error || data.message || '运行环境解析失败');
|
||||
}
|
||||
return data;
|
||||
} catch (e) {
|
||||
console.error('[lightWeightExtensionTest] env/resolve 调用失败:', e);
|
||||
throw e;
|
||||
}
|
||||
}
|
||||
|
||||
function notifyError(message) {
|
||||
if (window.ElementPlus && window.ElementPlus.ElMessage) {
|
||||
window.ElementPlus.ElMessage.error(message);
|
||||
}
|
||||
}
|
||||
|
||||
async function ensureJob(hooks) {
|
||||
if (String(hooks.jobInfo.job_id || '').trim() && String(hooks.jobInfo.job_id) !== 'default_job') {
|
||||
return;
|
||||
}
|
||||
await hooks.createNewJob();
|
||||
if (!String(hooks.jobInfo.job_id || '').trim() || String(hooks.jobInfo.job_id) === 'default_job') {
|
||||
throw new Error('自动创建 Job 失败');
|
||||
}
|
||||
}
|
||||
|
||||
async function processFolderFiles(hooks, inputFiles) {
|
||||
const files = Array.from(inputFiles || []).filter((file) => normalizedRelativePath(file));
|
||||
if (!files.length) {
|
||||
throw new Error('未读取到任何文件');
|
||||
}
|
||||
hooks.lightweightExtensionTestStatus.value = '正在校验目录结构...';
|
||||
const rootName = extractRootName(files);
|
||||
const fixed = splitFixedStructure(files);
|
||||
hooks.lightweightExtensionTestStatus.value = '正在确保 Job 可用...';
|
||||
await ensureJob(hooks);
|
||||
hooks.lightweightExtensionTestStatus.value = '正在解析运行环境...';
|
||||
const envResult = await resolveRuntimeEnv(files);
|
||||
hooks.extensionBuild.runtimeEnv = envResult.runtime_env || 'test4py311';
|
||||
console.log(
|
||||
'[lightWeightExtensionTest] ✓ 选定环境: ' + hooks.extensionBuild.runtimeEnv,
|
||||
'| 原因: ' + (envResult.reason || 'unknown'),
|
||||
'| 兜底: ' + (envResult.fallback ? '是' : '否'),
|
||||
envResult.matches ? '| 候选: ' + JSON.stringify(envResult.matches.map(m => m.env + '(py:' + (m.python_hits || []).join(',') + ' r:' + (m.r_hits || []).join(',') + ')')) : '',
|
||||
);
|
||||
hooks.lightweightExtensionTestStatus.value = '正在镜像导入当前 Job...';
|
||||
await importFolderToJob(hooks, rootName, files);
|
||||
hooks.extensionBuild.displayName = rootName;
|
||||
hooks.extensionBuild.command = 'bash run.sh';
|
||||
hooks.extensionBuild.codeFiles = hooks.appendExtensionFiles([], fixed.codeFiles);
|
||||
hooks.extensionBuild.dataFiles = hooks.appendExtensionFiles([], fixed.dataFiles);
|
||||
hooks.extensionBuild.dataPaths = '';
|
||||
hooks.lightweightExtensionTestStatus.value = `运行环境 ${hooks.extensionBuild.runtimeEnv} 已确定，正在触发 upload...`;
|
||||
await hooks.buildLightweightExtensionStage();
|
||||
hooks.lightweightExtensionTestStatus.value = '已开始 upload，系统正在自动轮询并等待候选卡。';
|
||||
}
|
||||
|
||||
async function readEntry(entry, basePath) {
|
||||
if (entry.isFile) {
|
||||
return new Promise((resolve) => {
|
||||
entry.file((file) => {
|
||||
Object.defineProperty(file, 'webkitRelativePath', {
|
||||
value: basePath ? basePath + '/' + entry.name : entry.name,
|
||||
writable: false,
|
||||
});
|
||||
resolve([file]);
|
||||
});
|
||||
});
|
||||
}
|
||||
if (entry.isDirectory) {
|
||||
const reader = entry.createReader();
|
||||
const entries = await new Promise((resolve) => {
|
||||
reader.readEntries(resolve);
|
||||
});
|
||||
const subPath = basePath ? basePath + '/' + entry.name : entry.name;
|
||||
const nested = await Promise.all(entries.map((e) => readEntry(e, subPath)));
|
||||
return nested.flat();
|
||||
}
|
||||
return [];
|
||||
}
|
||||
|
||||
async function readDroppedFiles(dataTransfer) {
|
||||
if (!dataTransfer || !dataTransfer.items) {
|
||||
return Array.from(dataTransfer?.files || []);
|
||||
}
|
||||
const items = Array.from(dataTransfer.items);
|
||||
const entries = items
|
||||
.map((item) => item.webkitGetAsEntry && item.webkitGetAsEntry())
|
||||
.filter(Boolean);
|
||||
if (!entries.length) {
|
||||
return Array.from(dataTransfer.files || []);
|
||||
}
|
||||
const results = await Promise.all(entries.map((entry) => readEntry(entry, '')));
|
||||
return results.flat();
|
||||
}
|
||||
|
||||
function mountApi() {
|
||||
window.LightWeightExtensionTest = {
|
||||
async handleDrop(hooks, event) {
|
||||
try {
|
||||
const files = await readDroppedFiles(event?.dataTransfer);
|
||||
await processFolderFiles(hooks, files);
|
||||
} catch (error) {
|
||||
const message = `失败：${error.message || '目录处理失败'}`;
|
||||
hooks.lightweightExtensionTestStatus.value = message;
|
||||
notifyError(message);
|
||||
}
|
||||
},
|
||||
async handlePick(hooks, event) {
|
||||
const files = event?.target?.files || [];
|
||||
try {
|
||||
await processFolderFiles(hooks, files);
|
||||
} catch (error) {
|
||||
const message = `失败：${error.message || '目录处理失败'}`;
|
||||
hooks.lightweightExtensionTestStatus.value = message;
|
||||
notifyError(message);
|
||||
} finally {
|
||||
if (event?.target) {
|
||||
event.target.value = '';
|
||||
}
|
||||
}
|
||||
},
|
||||
openPicker() {
|
||||
const input = document.getElementById('lightweight-extension-test-folder-input');
|
||||
if (input) {
|
||||
input.click();
|
||||
}
|
||||
},
|
||||
};
|
||||
}
|
||||
|
||||
mountApi();
|
||||
})();
|
||||
+801
-39
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,165 @@
|
||||
// global wrapper
|
||||
/*! Element Plus v2.3.14 */
|
||||
|
||||
window.en = {
|
||||
name: "en",
|
||||
el: {
|
||||
colorpicker: {
|
||||
confirm: "OK",
|
||||
clear: "Clear",
|
||||
defaultLabel: "color picker",
|
||||
description: "current color is {color}. press enter to select a new color."
|
||||
},
|
||||
datepicker: {
|
||||
now: "Now",
|
||||
today: "Today",
|
||||
cancel: "Cancel",
|
||||
clear: "Clear",
|
||||
confirm: "OK",
|
||||
dateTablePrompt: "Use the arrow keys and enter to select the day of the month",
|
||||
monthTablePrompt: "Use the arrow keys and enter to select the month",
|
||||
yearTablePrompt: "Use the arrow keys and enter to select the year",
|
||||
selectedDate: "Selected date",
|
||||
selectDate: "Select date",
|
||||
selectTime: "Select time",
|
||||
startDate: "Start Date",
|
||||
startTime: "Start Time",
|
||||
endDate: "End Date",
|
||||
endTime: "End Time",
|
||||
prevYear: "Previous Year",
|
||||
nextYear: "Next Year",
|
||||
prevMonth: "Previous Month",
|
||||
nextMonth: "Next Month",
|
||||
year: "",
|
||||
month1: "January",
|
||||
month2: "February",
|
||||
month3: "March",
|
||||
month4: "April",
|
||||
month5: "May",
|
||||
month6: "June",
|
||||
month7: "July",
|
||||
month8: "August",
|
||||
month9: "September",
|
||||
month10: "October",
|
||||
month11: "November",
|
||||
month12: "December",
|
||||
week: "week",
|
||||
weeks: {
|
||||
sun: "Sun",
|
||||
mon: "Mon",
|
||||
tue: "Tue",
|
||||
wed: "Wed",
|
||||
thu: "Thu",
|
||||
fri: "Fri",
|
||||
sat: "Sat"
|
||||
},
|
||||
weeksFull: {
|
||||
sun: "Sunday",
|
||||
mon: "Monday",
|
||||
tue: "Tuesday",
|
||||
wed: "Wednesday",
|
||||
thu: "Thursday",
|
||||
fri: "Friday",
|
||||
sat: "Saturday"
|
||||
},
|
||||
months: {
|
||||
jan: "Jan",
|
||||
feb: "Feb",
|
||||
mar: "Mar",
|
||||
apr: "Apr",
|
||||
may: "May",
|
||||
jun: "Jun",
|
||||
jul: "Jul",
|
||||
aug: "Aug",
|
||||
sep: "Sep",
|
||||
oct: "Oct",
|
||||
nov: "Nov",
|
||||
dec: "Dec"
|
||||
}
|
||||
},
|
||||
inputNumber: {
|
||||
decrease: "decrease number",
|
||||
increase: "increase number"
|
||||
},
|
||||
select: {
|
||||
loading: "Loading",
|
||||
noMatch: "No matching data",
|
||||
noData: "No data",
|
||||
placeholder: "Select"
|
||||
},
|
||||
dropdown: {
|
||||
toggleDropdown: "Toggle Dropdown"
|
||||
},
|
||||
cascader: {
|
||||
noMatch: "No matching data",
|
||||
loading: "Loading",
|
||||
placeholder: "Select",
|
||||
noData: "No data"
|
||||
},
|
||||
pagination: {
|
||||
goto: "Go to",
|
||||
pagesize: "/page",
|
||||
total: "Total {total}",
|
||||
pageClassifier: "",
|
||||
page: "Page",
|
||||
prev: "Go to previous page",
|
||||
next: "Go to next page",
|
||||
currentPage: "page {pager}",
|
||||
prevPages: "Previous {pager} pages",
|
||||
nextPages: "Next {pager} pages",
|
||||
deprecationWarning: "Deprecated usages detected, please refer to the el-pagination documentation for more details"
|
||||
},
|
||||
dialog: {
|
||||
close: "Close this dialog"
|
||||
},
|
||||
drawer: {
|
||||
close: "Close this dialog"
|
||||
},
|
||||
messagebox: {
|
||||
title: "Message",
|
||||
confirm: "OK",
|
||||
cancel: "Cancel",
|
||||
error: "Illegal input",
|
||||
close: "Close this dialog"
|
||||
},
|
||||
upload: {
|
||||
deleteTip: "press delete to remove",
|
||||
delete: "Delete",
|
||||
preview: "Preview",
|
||||
continue: "Continue"
|
||||
},
|
||||
slider: {
|
||||
defaultLabel: "slider between {min} and {max}",
|
||||
defaultRangeStartLabel: "pick start value",
|
||||
defaultRangeEndLabel: "pick end value"
|
||||
},
|
||||
table: {
|
||||
emptyText: "No Data",
|
||||
confirmFilter: "Confirm",
|
||||
resetFilter: "Reset",
|
||||
clearFilter: "All",
|
||||
sumText: "Sum"
|
||||
},
|
||||
tree: {
|
||||
emptyText: "No Data"
|
||||
},
|
||||
transfer: {
|
||||
noMatch: "No matching data",
|
||||
noData: "No data",
|
||||
titles: ["List 1", "List 2"],
|
||||
filterPlaceholder: "Enter keyword",
|
||||
noCheckedFormat: "{total} items",
|
||||
hasCheckedFormat: "{checked}/{total} checked"
|
||||
},
|
||||
image: {
|
||||
error: "FAILED"
|
||||
},
|
||||
pageHeader: {
|
||||
title: "Back"
|
||||
},
|
||||
popconfirm: {
|
||||
confirmButtonText: "Yes",
|
||||
cancelButtonText: "No"
|
||||
}
|
||||
}
|
||||
};
|
||||
@@ -0,0 +1,165 @@
|
||||
/*! Element Plus v2.3.14 */
|
||||
|
||||
var en = {
|
||||
name: "en",
|
||||
el: {
|
||||
colorpicker: {
|
||||
confirm: "OK",
|
||||
clear: "Clear",
|
||||
defaultLabel: "color picker",
|
||||
description: "current color is {color}. press enter to select a new color."
|
||||
},
|
||||
datepicker: {
|
||||
now: "Now",
|
||||
today: "Today",
|
||||
cancel: "Cancel",
|
||||
clear: "Clear",
|
||||
confirm: "OK",
|
||||
dateTablePrompt: "Use the arrow keys and enter to select the day of the month",
|
||||
monthTablePrompt: "Use the arrow keys and enter to select the month",
|
||||
yearTablePrompt: "Use the arrow keys and enter to select the year",
|
||||
selectedDate: "Selected date",
|
||||
selectDate: "Select date",
|
||||
selectTime: "Select time",
|
||||
startDate: "Start Date",
|
||||
startTime: "Start Time",
|
||||
endDate: "End Date",
|
||||
endTime: "End Time",
|
||||
prevYear: "Previous Year",
|
||||
nextYear: "Next Year",
|
||||
prevMonth: "Previous Month",
|
||||
nextMonth: "Next Month",
|
||||
year: "",
|
||||
month1: "January",
|
||||
month2: "February",
|
||||
month3: "March",
|
||||
month4: "April",
|
||||
month5: "May",
|
||||
month6: "June",
|
||||
month7: "July",
|
||||
month8: "August",
|
||||
month9: "September",
|
||||
month10: "October",
|
||||
month11: "November",
|
||||
month12: "December",
|
||||
week: "week",
|
||||
weeks: {
|
||||
sun: "Sun",
|
||||
mon: "Mon",
|
||||
tue: "Tue",
|
||||
wed: "Wed",
|
||||
thu: "Thu",
|
||||
fri: "Fri",
|
||||
sat: "Sat"
|
||||
},
|
||||
weeksFull: {
|
||||
sun: "Sunday",
|
||||
mon: "Monday",
|
||||
tue: "Tuesday",
|
||||
wed: "Wednesday",
|
||||
thu: "Thursday",
|
||||
fri: "Friday",
|
||||
sat: "Saturday"
|
||||
},
|
||||
months: {
|
||||
jan: "Jan",
|
||||
feb: "Feb",
|
||||
mar: "Mar",
|
||||
apr: "Apr",
|
||||
may: "May",
|
||||
jun: "Jun",
|
||||
jul: "Jul",
|
||||
aug: "Aug",
|
||||
sep: "Sep",
|
||||
oct: "Oct",
|
||||
nov: "Nov",
|
||||
dec: "Dec"
|
||||
}
|
||||
},
|
||||
inputNumber: {
|
||||
decrease: "decrease number",
|
||||
increase: "increase number"
|
||||
},
|
||||
select: {
|
||||
loading: "Loading",
|
||||
noMatch: "No matching data",
|
||||
noData: "No data",
|
||||
placeholder: "Select"
|
||||
},
|
||||
dropdown: {
|
||||
toggleDropdown: "Toggle Dropdown"
|
||||
},
|
||||
cascader: {
|
||||
noMatch: "No matching data",
|
||||
loading: "Loading",
|
||||
placeholder: "Select",
|
||||
noData: "No data"
|
||||
},
|
||||
pagination: {
|
||||
goto: "Go to",
|
||||
pagesize: "/page",
|
||||
total: "Total {total}",
|
||||
pageClassifier: "",
|
||||
page: "Page",
|
||||
prev: "Go to previous page",
|
||||
next: "Go to next page",
|
||||
currentPage: "page {pager}",
|
||||
prevPages: "Previous {pager} pages",
|
||||
nextPages: "Next {pager} pages",
|
||||
deprecationWarning: "Deprecated usages detected, please refer to the el-pagination documentation for more details"
|
||||
},
|
||||
dialog: {
|
||||
close: "Close this dialog"
|
||||
},
|
||||
drawer: {
|
||||
close: "Close this dialog"
|
||||
},
|
||||
messagebox: {
|
||||
title: "Message",
|
||||
confirm: "OK",
|
||||
cancel: "Cancel",
|
||||
error: "Illegal input",
|
||||
close: "Close this dialog"
|
||||
},
|
||||
upload: {
|
||||
deleteTip: "press delete to remove",
|
||||
delete: "Delete",
|
||||
preview: "Preview",
|
||||
continue: "Continue"
|
||||
},
|
||||
slider: {
|
||||
defaultLabel: "slider between {min} and {max}",
|
||||
defaultRangeStartLabel: "pick start value",
|
||||
defaultRangeEndLabel: "pick end value"
|
||||
},
|
||||
table: {
|
||||
emptyText: "No Data",
|
||||
confirmFilter: "Confirm",
|
||||
resetFilter: "Reset",
|
||||
clearFilter: "All",
|
||||
sumText: "Sum"
|
||||
},
|
||||
tree: {
|
||||
emptyText: "No Data"
|
||||
},
|
||||
transfer: {
|
||||
noMatch: "No matching data",
|
||||
noData: "No data",
|
||||
titles: ["List 1", "List 2"],
|
||||
filterPlaceholder: "Enter keyword",
|
||||
noCheckedFormat: "{total} items",
|
||||
hasCheckedFormat: "{checked}/{total} checked"
|
||||
},
|
||||
image: {
|
||||
error: "FAILED"
|
||||
},
|
||||
pageHeader: {
|
||||
title: "Back"
|
||||
},
|
||||
popconfirm: {
|
||||
confirmButtonText: "Yes",
|
||||
cancelButtonText: "No"
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
@@ -0,0 +1,130 @@
|
||||
// global wrapper
|
||||
/*! Element Plus v2.3.14 */
|
||||
|
||||
window.zhCn = {
|
||||
name: "zh-cn",
|
||||
el: {
|
||||
colorpicker: {
|
||||
confirm: "\u786E\u5B9A",
|
||||
clear: "\u6E05\u7A7A"
|
||||
},
|
||||
datepicker: {
|
||||
now: "\u6B64\u523B",
|
||||
today: "\u4ECA\u5929",
|
||||
cancel: "\u53D6\u6D88",
|
||||
clear: "\u6E05\u7A7A",
|
||||
confirm: "\u786E\u5B9A",
|
||||
selectDate: "\u9009\u62E9\u65E5\u671F",
|
||||
selectTime: "\u9009\u62E9\u65F6\u95F4",
|
||||
startDate: "\u5F00\u59CB\u65E5\u671F",
|
||||
startTime: "\u5F00\u59CB\u65F6\u95F4",
|
||||
endDate: "\u7ED3\u675F\u65E5\u671F",
|
||||
endTime: "\u7ED3\u675F\u65F6\u95F4",
|
||||
prevYear: "\u524D\u4E00\u5E74",
|
||||
nextYear: "\u540E\u4E00\u5E74",
|
||||
prevMonth: "\u4E0A\u4E2A\u6708",
|
||||
nextMonth: "\u4E0B\u4E2A\u6708",
|
||||
year: "\u5E74",
|
||||
month1: "1 \u6708",
|
||||
month2: "2 \u6708",
|
||||
month3: "3 \u6708",
|
||||
month4: "4 \u6708",
|
||||
month5: "5 \u6708",
|
||||
month6: "6 \u6708",
|
||||
month7: "7 \u6708",
|
||||
month8: "8 \u6708",
|
||||
month9: "9 \u6708",
|
||||
month10: "10 \u6708",
|
||||
month11: "11 \u6708",
|
||||
month12: "12 \u6708",
|
||||
weeks: {
|
||||
sun: "\u65E5",
|
||||
mon: "\u4E00",
|
||||
tue: "\u4E8C",
|
||||
wed: "\u4E09",
|
||||
thu: "\u56DB",
|
||||
fri: "\u4E94",
|
||||
sat: "\u516D"
|
||||
},
|
||||
months: {
|
||||
jan: "\u4E00\u6708",
|
||||
feb: "\u4E8C\u6708",
|
||||
mar: "\u4E09\u6708",
|
||||
apr: "\u56DB\u6708",
|
||||
may: "\u4E94\u6708",
|
||||
jun: "\u516D\u6708",
|
||||
jul: "\u4E03\u6708",
|
||||
aug: "\u516B\u6708",
|
||||
sep: "\u4E5D\u6708",
|
||||
oct: "\u5341\u6708",
|
||||
nov: "\u5341\u4E00\u6708",
|
||||
dec: "\u5341\u4E8C\u6708"
|
||||
}
|
||||
},
|
||||
select: {
|
||||
loading: "\u52A0\u8F7D\u4E2D",
|
||||
noMatch: "\u65E0\u5339\u914D\u6570\u636E",
|
||||
noData: "\u65E0\u6570\u636E",
|
||||
placeholder: "\u8BF7\u9009\u62E9"
|
||||
},
|
||||
cascader: {
|
||||
noMatch: "\u65E0\u5339\u914D\u6570\u636E",
|
||||
loading: "\u52A0\u8F7D\u4E2D",
|
||||
placeholder: "\u8BF7\u9009\u62E9",
|
||||
noData: "\u6682\u65E0\u6570\u636E"
|
||||
},
|
||||
pagination: {
|
||||
goto: "\u524D\u5F80",
|
||||
pagesize: "\u6761/\u9875",
|
||||
total: "\u5171 {total} \u6761",
|
||||
pageClassifier: "\u9875",
|
||||
page: "\u9875",
|
||||
prev: "\u4E0A\u4E00\u9875",
|
||||
next: "\u4E0B\u4E00\u9875",
|
||||
currentPage: "\u7B2C {pager} \u9875",
|
||||
prevPages: "\u5411\u524D {pager} \u9875",
|
||||
nextPages: "\u5411\u540E {pager} \u9875",
|
||||
deprecationWarning: "\u4F60\u4F7F\u7528\u4E86\u4E00\u4E9B\u5DF2\u88AB\u5E9F\u5F03\u7684\u7528\u6CD5\uFF0C\u8BF7\u53C2\u8003 el-pagination \u7684\u5B98\u65B9\u6587\u6863"
|
||||
},
|
||||
messagebox: {
|
||||
title: "\u63D0\u793A",
|
||||
confirm: "\u786E\u5B9A",
|
||||
cancel: "\u53D6\u6D88",
|
||||
error: "\u8F93\u5165\u7684\u6570\u636E\u4E0D\u5408\u6CD5!"
|
||||
},
|
||||
upload: {
|
||||
deleteTip: "\u6309 delete \u952E\u53EF\u5220\u9664",
|
||||
delete: "\u5220\u9664",
|
||||
preview: "\u67E5\u770B\u56FE\u7247",
|
||||
continue: "\u7EE7\u7EED\u4E0A\u4F20"
|
||||
},
|
||||
table: {
|
||||
emptyText: "\u6682\u65E0\u6570\u636E",
|
||||
confirmFilter: "\u7B5B\u9009",
|
||||
resetFilter: "\u91CD\u7F6E",
|
||||
clearFilter: "\u5168\u90E8",
|
||||
sumText: "\u5408\u8BA1"
|
||||
},
|
||||
tree: {
|
||||
emptyText: "\u6682\u65E0\u6570\u636E"
|
||||
},
|
||||
transfer: {
|
||||
noMatch: "\u65E0\u5339\u914D\u6570\u636E",
|
||||
noData: "\u65E0\u6570\u636E",
|
||||
titles: ["\u5217\u8868 1", "\u5217\u8868 2"],
|
||||
filterPlaceholder: "\u8BF7\u8F93\u5165\u641C\u7D22\u5185\u5BB9",
|
||||
noCheckedFormat: "\u5171 {total} \u9879",
|
||||
hasCheckedFormat: "\u5DF2\u9009 {checked}/{total} \u9879"
|
||||
},
|
||||
image: {
|
||||
error: "\u52A0\u8F7D\u5931\u8D25"
|
||||
},
|
||||
pageHeader: {
|
||||
title: "\u8FD4\u56DE"
|
||||
},
|
||||
popconfirm: {
|
||||
confirmButtonText: "\u786E\u5B9A",
|
||||
cancelButtonText: "\u53D6\u6D88"
|
||||
}
|
||||
}
|
||||
};
|
||||
@@ -0,0 +1,130 @@
|
||||
/*! Element Plus v2.3.14 */
|
||||
|
||||
var zhCn = {
|
||||
name: "zh-cn",
|
||||
el: {
|
||||
colorpicker: {
|
||||
confirm: "\u786E\u5B9A",
|
||||
clear: "\u6E05\u7A7A"
|
||||
},
|
||||
datepicker: {
|
||||
now: "\u6B64\u523B",
|
||||
today: "\u4ECA\u5929",
|
||||
cancel: "\u53D6\u6D88",
|
||||
clear: "\u6E05\u7A7A",
|
||||
confirm: "\u786E\u5B9A",
|
||||
selectDate: "\u9009\u62E9\u65E5\u671F",
|
||||
selectTime: "\u9009\u62E9\u65F6\u95F4",
|
||||
startDate: "\u5F00\u59CB\u65E5\u671F",
|
||||
startTime: "\u5F00\u59CB\u65F6\u95F4",
|
||||
endDate: "\u7ED3\u675F\u65E5\u671F",
|
||||
endTime: "\u7ED3\u675F\u65F6\u95F4",
|
||||
prevYear: "\u524D\u4E00\u5E74",
|
||||
nextYear: "\u540E\u4E00\u5E74",
|
||||
prevMonth: "\u4E0A\u4E2A\u6708",
|
||||
nextMonth: "\u4E0B\u4E2A\u6708",
|
||||
year: "\u5E74",
|
||||
month1: "1 \u6708",
|
||||
month2: "2 \u6708",
|
||||
month3: "3 \u6708",
|
||||
month4: "4 \u6708",
|
||||
month5: "5 \u6708",
|
||||
month6: "6 \u6708",
|
||||
month7: "7 \u6708",
|
||||
month8: "8 \u6708",
|
||||
month9: "9 \u6708",
|
||||
month10: "10 \u6708",
|
||||
month11: "11 \u6708",
|
||||
month12: "12 \u6708",
|
||||
weeks: {
|
||||
sun: "\u65E5",
|
||||
mon: "\u4E00",
|
||||
tue: "\u4E8C",
|
||||
wed: "\u4E09",
|
||||
thu: "\u56DB",
|
||||
fri: "\u4E94",
|
||||
sat: "\u516D"
|
||||
},
|
||||
months: {
|
||||
jan: "\u4E00\u6708",
|
||||
feb: "\u4E8C\u6708",
|
||||
mar: "\u4E09\u6708",
|
||||
apr: "\u56DB\u6708",
|
||||
may: "\u4E94\u6708",
|
||||
jun: "\u516D\u6708",
|
||||
jul: "\u4E03\u6708",
|
||||
aug: "\u516B\u6708",
|
||||
sep: "\u4E5D\u6708",
|
||||
oct: "\u5341\u6708",
|
||||
nov: "\u5341\u4E00\u6708",
|
||||
dec: "\u5341\u4E8C\u6708"
|
||||
}
|
||||
},
|
||||
select: {
|
||||
loading: "\u52A0\u8F7D\u4E2D",
|
||||
noMatch: "\u65E0\u5339\u914D\u6570\u636E",
|
||||
noData: "\u65E0\u6570\u636E",
|
||||
placeholder: "\u8BF7\u9009\u62E9"
|
||||
},
|
||||
cascader: {
|
||||
noMatch: "\u65E0\u5339\u914D\u6570\u636E",
|
||||
loading: "\u52A0\u8F7D\u4E2D",
|
||||
placeholder: "\u8BF7\u9009\u62E9",
|
||||
noData: "\u6682\u65E0\u6570\u636E"
|
||||
},
|
||||
pagination: {
|
||||
goto: "\u524D\u5F80",
|
||||
pagesize: "\u6761/\u9875",
|
||||
total: "\u5171 {total} \u6761",
|
||||
pageClassifier: "\u9875",
|
||||
page: "\u9875",
|
||||
prev: "\u4E0A\u4E00\u9875",
|
||||
next: "\u4E0B\u4E00\u9875",
|
||||
currentPage: "\u7B2C {pager} \u9875",
|
||||
prevPages: "\u5411\u524D {pager} \u9875",
|
||||
nextPages: "\u5411\u540E {pager} \u9875",
|
||||
deprecationWarning: "\u4F60\u4F7F\u7528\u4E86\u4E00\u4E9B\u5DF2\u88AB\u5E9F\u5F03\u7684\u7528\u6CD5\uFF0C\u8BF7\u53C2\u8003 el-pagination \u7684\u5B98\u65B9\u6587\u6863"
|
||||
},
|
||||
messagebox: {
|
||||
title: "\u63D0\u793A",
|
||||
confirm: "\u786E\u5B9A",
|
||||
cancel: "\u53D6\u6D88",
|
||||
error: "\u8F93\u5165\u7684\u6570\u636E\u4E0D\u5408\u6CD5!"
|
||||
},
|
||||
upload: {
|
||||
deleteTip: "\u6309 delete \u952E\u53EF\u5220\u9664",
|
||||
delete: "\u5220\u9664",
|
||||
preview: "\u67E5\u770B\u56FE\u7247",
|
||||
continue: "\u7EE7\u7EED\u4E0A\u4F20"
|
||||
},
|
||||
table: {
|
||||
emptyText: "\u6682\u65E0\u6570\u636E",
|
||||
confirmFilter: "\u7B5B\u9009",
|
||||
resetFilter: "\u91CD\u7F6E",
|
||||
clearFilter: "\u5168\u90E8",
|
||||
sumText: "\u5408\u8BA1"
|
||||
},
|
||||
tree: {
|
||||
emptyText: "\u6682\u65E0\u6570\u636E"
|
||||
},
|
||||
transfer: {
|
||||
noMatch: "\u65E0\u5339\u914D\u6570\u636E",
|
||||
noData: "\u65E0\u6570\u636E",
|
||||
titles: ["\u5217\u8868 1", "\u5217\u8868 2"],
|
||||
filterPlaceholder: "\u8BF7\u8F93\u5165\u641C\u7D22\u5185\u5BB9",
|
||||
noCheckedFormat: "\u5171 {total} \u9879",
|
||||
hasCheckedFormat: "\u5DF2\u9009 {checked}/{total} \u9879"
|
||||
},
|
||||
image: {
|
||||
error: "\u52A0\u8F7D\u5931\u8D25"
|
||||
},
|
||||
pageHeader: {
|
||||
title: "\u8FD4\u56DE"
|
||||
},
|
||||
popconfirm: {
|
||||
confirmButtonText: "\u786E\u5B9A",
|
||||
cancelButtonText: "\u53D6\u6D88"
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
@@ -1,373 +1,373 @@
|
||||
/**
|
||||
* Conversation Sidebar Component
|
||||
* 类似ChatGPT的会话侧边栏组件
|
||||
* Conversation Sidebar component
|
||||
*/
|
||||
|
||||
const ConversationSidebar = {
|
||||
template: `
|
||||
<div class="conversation-sidebar" :class="{ collapsed: isCollapsed }">
|
||||
<!-- 头部：New Chat按钮 -->
|
||||
<div class="sidebar-header">
|
||||
<button class="new-chat-btn" @click="createNewConversation">
|
||||
<el-icon><plus /></el-icon>
|
||||
<span v-if="!isCollapsed">New Chat</span>
|
||||
</button>
|
||||
<button class="toggle-btn" @click="toggleSidebar">
|
||||
<el-icon><arrow-left v-if="!isCollapsed" /><arrow-right v-else /></el-icon>
|
||||
</button>
|
||||
</div>
|
||||
|
||||
<!-- 搜索框 -->
|
||||
<div class="search-box" v-if="!isCollapsed">
|
||||
<el-input
|
||||
v-model="searchQuery"
|
||||
placeholder="搜索会话..."
|
||||
prefix-icon="search"
|
||||
clearable
|
||||
size="small"
|
||||
/>
|
||||
</div>
|
||||
|
||||
<!-- 会话列表 -->
|
||||
<div class="conversation-list" v-if="!isCollapsed">
|
||||
<!-- 今日会话 -->
|
||||
<div class="list-section" v-if="todayConversations.length > 0">
|
||||
<div class="section-title">今天</div>
|
||||
<div
|
||||
v-for="conv in todayConversations"
|
||||
:key="conv.conversation_id"
|
||||
class="conversation-item"
|
||||
:class="{ active: currentConversationId === conv.conversation_id }"
|
||||
@click="selectConversation(conv)"
|
||||
>
|
||||
<div class="item-icon">
|
||||
<el-icon><chat-dot-round /></el-icon>
|
||||
</div>
|
||||
<div class="item-content">
|
||||
<div class="item-title">{{ conv.title }}</div>
|
||||
<div class="item-meta">
|
||||
<span class="gene-family" v-if="conv.gene_family">{{ conv.gene_family }}</span>
|
||||
<span class="message-count">{{ conv.message_count }}条消息</span>
|
||||
</div>
|
||||
<div class="item-preview">{{ conv.last_message }}</div>
|
||||
</div>
|
||||
<div class="item-actions" @click.stop>
|
||||
<el-dropdown trigger="click">
|
||||
<el-icon><more /></el-icon>
|
||||
<template #dropdown>
|
||||
<el-dropdown-menu>
|
||||
<el-dropdown-item @click="renameConversation(conv)">
|
||||
<el-icon><edit /></el-icon>重命名
|
||||
</el-dropdown-item>
|
||||
<el-dropdown-item @click="archiveConversation(conv)">
|
||||
<el-icon><folder /></el-icon>归档
|
||||
</el-dropdown-item>
|
||||
<el-dropdown-item divided @click="deleteConversation(conv)" type="danger">
|
||||
<el-icon><delete /></el-icon>删除
|
||||
</el-dropdown-item>
|
||||
</el-dropdown-menu>
|
||||
</template>
|
||||
</el-dropdown>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- 昨日会话 -->
|
||||
<div class="list-section" v-if="yesterdayConversations.length > 0">
|
||||
<div class="section-title">昨天</div>
|
||||
<div
|
||||
v-for="conv in yesterdayConversations"
|
||||
:key="conv.conversation_id"
|
||||
class="conversation-item"
|
||||
:class="{ active: currentConversationId === conv.conversation_id }"
|
||||
@click="selectConversation(conv)"
|
||||
>
|
||||
<div class="item-icon">
|
||||
<el-icon><chat-dot-round /></el-icon>
|
||||
</div>
|
||||
<div class="item-content">
|
||||
<div class="item-title">{{ conv.title }}</div>
|
||||
<div class="item-meta">
|
||||
<span class="gene-family" v-if="conv.gene_family">{{ conv.gene_family }}</span>
|
||||
<span class="message-count">{{ conv.message_count }}条</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- 更早会话 -->
|
||||
<div class="list-section" v-if="olderConversations.length > 0">
|
||||
<div class="section-title">过去7天</div>
|
||||
<div
|
||||
v-for="conv in olderConversations"
|
||||
:key="conv.conversation_id"
|
||||
class="conversation-item"
|
||||
:class="{ active: currentConversationId === conv.conversation_id }"
|
||||
@click="selectConversation(conv)"
|
||||
>
|
||||
<div class="item-icon">
|
||||
<el-icon><chat-dot-round /></el-icon>
|
||||
</div>
|
||||
<div class="item-content">
|
||||
<div class="item-title">{{ conv.title }}</div>
|
||||
<div class="item-meta">
|
||||
<span class="gene-family" v-if="conv.gene_family">{{ conv.gene_family }}</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- 空状态 -->
|
||||
<div v-if="filteredConversations.length === 0" class="empty-state">
|
||||
<el-icon><chat-line-round /></el-icon>
|
||||
<p>暂无会话</p>
|
||||
<p class="hint">点击上方"New Chat"开始新的基因家族分析</p>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- 底部：用户信息 -->
|
||||
<div class="sidebar-footer" v-if="!isCollapsed">
|
||||
<div class="user-info">
|
||||
<el-avatar :size="32" :icon="UserFilled" />
|
||||
<span class="username">{{ userId }}</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
`,
|
||||
|
||||
props: {
|
||||
userId: {
|
||||
type: String,
|
||||
default: 'xia-lab'
|
||||
},
|
||||
apiBaseUrl: {
|
||||
type: String,
|
||||
default: 'http://localhost:8000/api'
|
||||
}
|
||||
},
|
||||
|
||||
data() {
|
||||
return {
|
||||
isCollapsed: false,
|
||||
searchQuery: '',
|
||||
conversations: [],
|
||||
currentConversationId: null,
|
||||
loading: false,
|
||||
// 图标
|
||||
Plus: ElementPlusIconsVue.Plus,
|
||||
ArrowLeft: ElementPlusIconsVue.ArrowLeft,
|
||||
ArrowRight: ElementPlusIconsVue.ArrowRight,
|
||||
ChatDotRound: ElementPlusIconsVue.ChatDotRound,
|
||||
ChatLineRound: ElementPlusIconsVue.ChatLineRound,
|
||||
More: ElementPlusIconsVue.More,
|
||||
Edit: ElementPlusIconsVue.Edit,
|
||||
Folder: ElementPlusIconsVue.Folder,
|
||||
Delete: ElementPlusIconsVue.Delete,
|
||||
UserFilled: ElementPlusIconsVue.UserFilled,
|
||||
}
|
||||
},
|
||||
|
||||
computed: {
|
||||
filteredConversations() {
|
||||
if (!this.searchQuery) return this.conversations;
|
||||
const query = this.searchQuery.toLowerCase();
|
||||
return this.conversations.filter(conv =>
|
||||
conv.title.toLowerCase().includes(query) ||
|
||||
(conv.gene_family && conv.gene_family.toLowerCase().includes(query)) ||
|
||||
conv.last_message.toLowerCase().includes(query)
|
||||
);
|
||||
},
|
||||
|
||||
todayConversations() {
|
||||
const today = new Date().toDateString();
|
||||
return this.filteredConversations.filter(conv => {
|
||||
const convDate = new Date(conv.updated_at).toDateString();
|
||||
return convDate === today;
|
||||
});
|
||||
},
|
||||
|
||||
yesterdayConversations() {
|
||||
const yesterday = new Date(Date.now() - 86400000).toDateString();
|
||||
return this.filteredConversations.filter(conv => {
|
||||
const convDate = new Date(conv.updated_at).toDateString();
|
||||
return convDate === yesterday;
|
||||
});
|
||||
},
|
||||
|
||||
olderConversations() {
|
||||
const yesterday = new Date(Date.now() - 86400000).toDateString();
|
||||
return this.filteredConversations.filter(conv => {
|
||||
const convDate = new Date(conv.updated_at).toDateString();
|
||||
return convDate < yesterday;
|
||||
});
|
||||
}
|
||||
},
|
||||
|
||||
mounted() {
|
||||
this.loadConversations();
|
||||
// 定时刷新
|
||||
this.refreshInterval = setInterval(() => {
|
||||
this.loadConversations();
|
||||
}, 30000); // 30秒刷新一次
|
||||
},
|
||||
|
||||
beforeUnmount() {
|
||||
if (this.refreshInterval) {
|
||||
clearInterval(this.refreshInterval);
|
||||
}
|
||||
},
|
||||
|
||||
methods: {
|
||||
async loadConversations() {
|
||||
try {
|
||||
this.loading = true;
|
||||
const response = await fetch(`${this.apiBaseUrl}/conversations/list/${this.userId}`);
|
||||
if (response.ok) {
|
||||
const data = await response.json();
|
||||
this.conversations = data.conversations || [];
|
||||
}
|
||||
} catch (error) {
|
||||
console.error('Failed to load conversations:', error);
|
||||
// 使用模拟数据
|
||||
this.conversations = this.getMockConversations();
|
||||
} finally {
|
||||
this.loading = false;
|
||||
}
|
||||
},
|
||||
|
||||
getMockConversations() {
|
||||
// 模拟数据，用于测试
|
||||
return [
|
||||
{
|
||||
conversation_id: 'conv_001',
|
||||
title: 'At.WRKY基因家族分析',
|
||||
gene_family: 'WRKY',
|
||||
species: 'At',
|
||||
message_count: 12,
|
||||
last_message: '系统发育树已生成完成',
|
||||
updated_at: new Date().toISOString()
|
||||
},
|
||||
{
|
||||
conversation_id: 'conv_002',
|
||||
title: 'Os.TCP进化分析',
|
||||
gene_family: 'TCP',
|
||||
species: 'Os',
|
||||
message_count: 5,
|
||||
last_message: '正在构建进化树...',
|
||||
updated_at: new Date(Date.now() - 3600000).toISOString()
|
||||
},
|
||||
{
|
||||
conversation_id: 'conv_003',
|
||||
title: 'HMMER参数配置咨询',
|
||||
message_count: 8,
|
||||
last_message: 'E-value建议设置为1e-5',
|
||||
updated_at: new Date(Date.now() - 86400000).toISOString()
|
||||
}
|
||||
];
|
||||
},
|
||||
|
||||
toggleSidebar() {
|
||||
this.isCollapsed = !this.isCollapsed;
|
||||
this.$emit('toggle', this.isCollapsed);
|
||||
},
|
||||
|
||||
async createNewConversation() {
|
||||
try {
|
||||
const response = await fetch(`${this.apiBaseUrl}/conversations/create`, {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
user_id: this.userId,
|
||||
title: '新会话 ' + new Date().toLocaleTimeString()
|
||||
})
|
||||
});
|
||||
|
||||
if (response.ok) {
|
||||
const data = await response.json();
|
||||
this.currentConversationId = data.conversation_id;
|
||||
this.$emit('new-conversation', data);
|
||||
await this.loadConversations();
|
||||
}
|
||||
} catch (error) {
|
||||
console.error('Failed to create conversation:', error);
|
||||
// 创建本地会话
|
||||
const newConv = {
|
||||
conversation_id: 'conv_' + Date.now(),
|
||||
title: '新会话',
|
||||
message_count: 0,
|
||||
last_message: '',
|
||||
updated_at: new Date().toISOString()
|
||||
};
|
||||
this.conversations.unshift(newConv);
|
||||
this.currentConversationId = newConv.conversation_id;
|
||||
this.$emit('new-conversation', newConv);
|
||||
}
|
||||
},
|
||||
|
||||
selectConversation(conv) {
|
||||
this.currentConversationId = conv.conversation_id;
|
||||
this.$emit('select-conversation', conv);
|
||||
},
|
||||
|
||||
async renameConversation(conv) {
|
||||
const newTitle = prompt('请输入新标题:', conv.title);
|
||||
if (newTitle && newTitle !== conv.title) {
|
||||
try {
|
||||
await fetch(`${this.apiBaseUrl}/conversations/update-title`, {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
conversation_id: conv.conversation_id,
|
||||
title: newTitle
|
||||
})
|
||||
});
|
||||
conv.title = newTitle;
|
||||
} catch (error) {
|
||||
console.error('Failed to rename:', error);
|
||||
conv.title = newTitle; // 本地更新
|
||||
}
|
||||
}
|
||||
},
|
||||
|
||||
async archiveConversation(conv) {
|
||||
try {
|
||||
await fetch(`${this.apiBaseUrl}/conversations/archive`, {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
conversation_id: conv.conversation_id
|
||||
})
|
||||
});
|
||||
await this.loadConversations();
|
||||
} catch (error) {
|
||||
console.error('Failed to archive:', error);
|
||||
}
|
||||
},
|
||||
|
||||
async deleteConversation(conv) {
|
||||
if (confirm(`确定要删除会话 "${conv.title}" 吗？`)) {
|
||||
try {
|
||||
await fetch(`${this.apiBaseUrl}/conversations/delete`, {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
conversation_id: conv.conversation_id
|
||||
})
|
||||
});
|
||||
await this.loadConversations();
|
||||
if (this.currentConversationId === conv.conversation_id) {
|
||||
this.currentConversationId = null;
|
||||
this.$emit('select-conversation', null);
|
||||
}
|
||||
} catch (error) {
|
||||
console.error('Failed to delete:', error);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
template: `
|
||||
<div class="conversation-sidebar" :class="{ collapsed: isCollapsed }">
|
||||
<!-- Header: New Chat button -->
|
||||
<div class="sidebar-header">
|
||||
<button class="new-chat-btn" @click="createNewConversation">
|
||||
<el-icon><plus /></el-icon>
|
||||
<span v-if="!isCollapsed">New Chat</span>
|
||||
</button>
|
||||
<button class="toggle-btn" @click="toggleSidebar">
|
||||
<el-icon><arrow-left v-if="!isCollapsed" /><arrow-right v-else /></el-icon>
|
||||
</button>
|
||||
</div>
|
||||
|
||||
<!-- Search box -->
|
||||
<div class="search-box" v-if="!isCollapsed">
|
||||
<el-input
|
||||
v-model="searchQuery"
|
||||
placeholder="Search conversations..."
|
||||
prefix-icon="search"
|
||||
clearable
|
||||
size="small"
|
||||
/>
|
||||
</div>
|
||||
|
||||
<!-- Conversation list -->
|
||||
<div class="conversation-list" v-if="!isCollapsed">
|
||||
<!-- Todays conversations -->
|
||||
<div class="list-section" v-if="todayConversations.length > 0">
|
||||
<div class="section-title">Today</div>
|
||||
<div
|
||||
v-for="conv in todayConversations"
|
||||
:key="conv.conversation_id"
|
||||
class="conversation-item"
|
||||
:class="{ active: currentConversationId === conv.conversation_id }"
|
||||
@click="selectConversation(conv)"
|
||||
>
|
||||
<div class="item-icon">
|
||||
<el-icon><chat-dot-round /></el-icon>
|
||||
</div>
|
||||
<div class="item-content">
|
||||
<div class="item-title">{{ conv.title }}</div>
|
||||
<div class="item-meta">
|
||||
<span class="gene-family" v-if="conv.gene_family">{{ conv.gene_family }}</span>
|
||||
<span class="message-count">{{ conv.message_count }} messages</span>
|
||||
</div>
|
||||
<div class="item-preview">{{ conv.last_message }}</div>
|
||||
</div>
|
||||
<div class="item-actions" @click.stop>
|
||||
<el-dropdown trigger="click">
|
||||
<el-icon><more /></el-icon>
|
||||
<template #dropdown>
|
||||
<el-dropdown-menu>
|
||||
<el-dropdown-item @click="renameConversation(conv)">
|
||||
<el-icon><edit /></el-icon>Rename
|
||||
</el-dropdown-item>
|
||||
<el-dropdown-item @click="archiveConversation(conv)">
|
||||
<el-icon><folder /></el-icon>Archive
|
||||
</el-dropdown-item>
|
||||
<el-dropdown-item divided @click="deleteConversation(conv)" type="danger">
|
||||
<el-icon><delete /></el-icon>Delete
|
||||
</el-dropdown-item>
|
||||
</el-dropdown-menu>
|
||||
</template>
|
||||
</el-dropdown>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- Yesterdays conversations -->
|
||||
<div class="list-section" v-if="yesterdayConversations.length > 0">
|
||||
<div class="section-title">Yesterday</div>
|
||||
<div
|
||||
v-for="conv in yesterdayConversations"
|
||||
:key="conv.conversation_id"
|
||||
class="conversation-item"
|
||||
:class="{ active: currentConversationId === conv.conversation_id }"
|
||||
@click="selectConversation(conv)"
|
||||
>
|
||||
<div class="item-icon">
|
||||
<el-icon><chat-dot-round /></el-icon>
|
||||
</div>
|
||||
<div class="item-content">
|
||||
<div class="item-title">{{ conv.title }}</div>
|
||||
<div class="item-meta">
|
||||
<span class="gene-family" v-if="conv.gene_family">{{ conv.gene_family }}</span>
|
||||
<span class="message-count">{{ conv.message_count }}</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- Older conversations -->
|
||||
<div class="list-section" v-if="olderConversations.length > 0">
|
||||
<div class="section-title">Past 7 days</div>
|
||||
<div
|
||||
v-for="conv in olderConversations"
|
||||
:key="conv.conversation_id"
|
||||
class="conversation-item"
|
||||
:class="{ active: currentConversationId === conv.conversation_id }"
|
||||
@click="selectConversation(conv)"
|
||||
>
|
||||
<div class="item-icon">
|
||||
<el-icon><chat-dot-round /></el-icon>
|
||||
</div>
|
||||
<div class="item-content">
|
||||
<div class="item-title">{{ conv.title }}</div>
|
||||
<div class="item-meta">
|
||||
<span class="gene-family" v-if="conv.gene_family">{{ conv.gene_family }}</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- Empty state -->
|
||||
<div v-if="filteredConversations.length === 0" class="empty-state">
|
||||
<el-icon><chat-line-round /></el-icon>
|
||||
<p>No conversations yet</p>
|
||||
<p class="hint">Click "New Chat" to start gene family analysis</p>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
<!-- footer: user info -->
|
||||
<div class="sidebar-footer" v-if="!isCollapsed">
|
||||
<div class="user-info">
|
||||
<el-avatar :size="32" :icon="UserFilled" />
|
||||
<span class="username">{{ userId }}</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
`,
|
||||
|
||||
props: {
|
||||
userId: {
|
||||
type: String,
|
||||
default: 'xia-lab'
|
||||
},
|
||||
apiBaseUrl: {
|
||||
type: String,
|
||||
default: 'http://localhost:8000/api'
|
||||
}
|
||||
},
|
||||
|
||||
data() {
|
||||
return {
|
||||
isCollapsed: false,
|
||||
searchQuery: '',
|
||||
conversations: [],
|
||||
currentConversationId: null,
|
||||
loading: false,
|
||||
// Icons
|
||||
Plus: ElementPlusIconsVue.Plus,
|
||||
ArrowLeft: ElementPlusIconsVue.ArrowLeft,
|
||||
ArrowRight: ElementPlusIconsVue.ArrowRight,
|
||||
ChatDotRound: ElementPlusIconsVue.ChatDotRound,
|
||||
ChatLineRound: ElementPlusIconsVue.ChatLineRound,
|
||||
More: ElementPlusIconsVue.More,
|
||||
Edit: ElementPlusIconsVue.Edit,
|
||||
Folder: ElementPlusIconsVue.Folder,
|
||||
Delete: ElementPlusIconsVue.Delete,
|
||||
UserFilled: ElementPlusIconsVue.UserFilled,
|
||||
}
|
||||
},
|
||||
|
||||
computed: {
|
||||
filteredConversations() {
|
||||
if (!this.searchQuery) return this.conversations;
|
||||
const query = this.searchQuery.toLowerCase();
|
||||
return this.conversations.filter(conv =>
|
||||
conv.title.toLowerCase().includes(query) ||
|
||||
(conv.gene_family && conv.gene_family.toLowerCase().includes(query)) ||
|
||||
conv.last_message.toLowerCase().includes(query)
|
||||
);
|
||||
},
|
||||
|
||||
todayConversations() {
|
||||
const today = new Date().toDateString();
|
||||
return this.filteredConversations.filter(conv => {
|
||||
const convDate = new Date(conv.updated_at).toDateString();
|
||||
return convDate === today;
|
||||
});
|
||||
},
|
||||
|
||||
yesterdayConversations() {
|
||||
const yesterday = new Date(Date.now() - 86400000).toDateString();
|
||||
return this.filteredConversations.filter(conv => {
|
||||
const convDate = new Date(conv.updated_at).toDateString();
|
||||
return convDate === yesterday;
|
||||
});
|
||||
},
|
||||
|
||||
olderConversations() {
|
||||
const yesterday = new Date(Date.now() - 86400000).toDateString();
|
||||
return this.filteredConversations.filter(conv => {
|
||||
const convDate = new Date(conv.updated_at).toDateString();
|
||||
return convDate < yesterday;
|
||||
});
|
||||
}
|
||||
},
|
||||
|
||||
mounted() {
|
||||
this.loadConversations();
|
||||
// Auto-refresh
|
||||
this.refreshInterval = setInterval(() => {
|
||||
this.loadConversations();
|
||||
}, 30000); // 30 seconds refresh interval
|
||||
},
|
||||
|
||||
beforeUnmount() {
|
||||
if (this.refreshInterval) {
|
||||
clearInterval(this.refreshInterval);
|
||||
}
|
||||
},
|
||||
|
||||
methods: {
|
||||
async loadConversations() {
|
||||
try {
|
||||
this.loading = true;
|
||||
const response = await fetch(`${this.apiBaseUrl}/conversations/list/${this.userId}`);
|
||||
if (response.ok) {
|
||||
const data = await response.json();
|
||||
this.conversations = data.conversations || [];
|
||||
}
|
||||
} catch (error) {
|
||||
console.error('Failed to load conversations:', error);
|
||||
// Use mock data
|
||||
this.conversations = this.getMockConversations();
|
||||
} finally {
|
||||
this.loading = false;
|
||||
}
|
||||
},
|
||||
|
||||
getMockConversations() {
|
||||
// Mock data for testing
|
||||
return [
|
||||
{
|
||||
conversation_id: 'conv_001',
|
||||
title: 'At.WRKY gene family analysis',
|
||||
gene_family: 'WRKY',
|
||||
species: 'At',
|
||||
message_count: 12,
|
||||
last_message: 'Phylogenetic tree done',
|
||||
updated_at: new Date().toISOString()
|
||||
},
|
||||
{
|
||||
conversation_id: 'conv_002',
|
||||
title: 'Os.TCP evolution analysis',
|
||||
gene_family: 'TCP',
|
||||
species: 'Os',
|
||||
message_count: 5,
|
||||
last_message: 'Building tree...',
|
||||
updated_at: new Date(Date.now() - 3600000).toISOString()
|
||||
},
|
||||
{
|
||||
conversation_id: 'conv_003',
|
||||
title: 'HMMER config consultation',
|
||||
message_count: 8,
|
||||
last_message: 'E-value 1e-5 recommended',
|
||||
updated_at: new Date(Date.now() - 86400000).toISOString()
|
||||
}
|
||||
];
|
||||
},
|
||||
|
||||
toggleSidebar() {
|
||||
this.isCollapsed = !this.isCollapsed;
|
||||
this.$emit('toggle', this.isCollapsed);
|
||||
},
|
||||
|
||||
async createNewConversation() {
|
||||
try {
|
||||
const response = await fetch(`${this.apiBaseUrl}/conversations/create`, {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
user_id: this.userId,
|
||||
title: 'New Chat ' + new Date().toLocaleTimeString()
|
||||
})
|
||||
});
|
||||
|
||||
if (response.ok) {
|
||||
const data = await response.json();
|
||||
this.currentConversationId = data.conversation_id;
|
||||
this.$emit('new-conversation', data);
|
||||
await this.loadConversations();
|
||||
}
|
||||
} catch (error) {
|
||||
console.error('Failed to create conversation:', error);
|
||||
// Create local conversation
|
||||
const newConv = {
|
||||
conversation_id: 'conv_' + Date.now(),
|
||||
title: 'New Chat',
|
||||
message_count: 0,
|
||||
last_message: '',
|
||||
updated_at: new Date().toISOString()
|
||||
};
|
||||
this.conversations.unshift(newConv);
|
||||
this.currentConversationId = newConv.conversation_id;
|
||||
this.$emit('new-conversation', newConv);
|
||||
}
|
||||
},
|
||||
|
||||
selectConversation(conv) {
|
||||
this.currentConversationId = conv.conversation_id;
|
||||
this.$emit('select-conversation', conv);
|
||||
},
|
||||
|
||||
async renameConversation(conv) {
|
||||
const newTitle = prompt('Enter new title:', conv.title);
|
||||
if (newTitle && newTitle !== conv.title) {
|
||||
try {
|
||||
await fetch(`${this.apiBaseUrl}/conversations/update-title`, {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
conversation_id: conv.conversation_id,
|
||||
title: newTitle
|
||||
})
|
||||
});
|
||||
conv.title = newTitle;
|
||||
} catch (error) {
|
||||
console.error('Failed to rename:', error);
|
||||
conv.title = newTitle; // local update
|
||||
}
|
||||
}
|
||||
},
|
||||
|
||||
async archiveConversation(conv) {
|
||||
try {
|
||||
await fetch(`${this.apiBaseUrl}/conversations/archive`, {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
conversation_id: conv.conversation_id
|
||||
})
|
||||
});
|
||||
await this.loadConversations();
|
||||
} catch (error) {
|
||||
console.error('Failed to archive:', error);
|
||||
}
|
||||
},
|
||||
|
||||
async deleteConversation(conv) {
|
||||
if (confirm(`Delete conversation "${conv.title}"?`)) {
|
||||
try {
|
||||
await fetch(`${this.apiBaseUrl}/conversations/delete`, {
|
||||
method: 'POST',
|
||||
headers: { 'Content-Type': 'application/json' },
|
||||
body: JSON.stringify({
|
||||
conversation_id: conv.conversation_id
|
||||
})
|
||||
});
|
||||
await this.loadConversations();
|
||||
if (this.currentConversationId === conv.conversation_id) {
|
||||
this.currentConversationId = null;
|
||||
this.$emit('select-conversation', null);
|
||||
}
|
||||
} catch (error) {
|
||||
console.error('Failed to delete:', error);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
// 导出组件
|
||||
// Export component
|
||||
if (typeof module !== 'undefined' && module.exports) {
|
||||
module.exports = { ConversationSidebar };
|
||||
module.exports = { ConversationSidebar };
|
||||
}
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,891 @@
|
||||
// ===== Agent 多语言：卡片 + Agent 消息英文翻译 =====
|
||||
// key 为中文原文，value 为英文翻译
|
||||
// 使用 t(key) 获取翻译，tp(key, params) 处理动态占位符
|
||||
|
||||
window.__I18N_EN__ = {
|
||||
"Agent状态": "AgentStatus",
|
||||
"Self-RAG反思": "Self-RAG Reflection",
|
||||
"三角形": "Triangle",
|
||||
"下一步": "Next Step",
|
||||
"下载": "Download",
|
||||
"不受支持标记处理策略": "Unsupported Marker Handling Policy",
|
||||
"中性替换率": "Neutral Substitution Rate",
|
||||
"中性速率": "Neutral Rate",
|
||||
"中文": "Chinese",
|
||||
"丰度引擎": "Abundance Engine",
|
||||
"主参考": "Primary Reference",
|
||||
"主参考物种": "Primary reference species",
|
||||
"主要结果": "Main Results",
|
||||
"亚家族分类确认": "Subfamily Classification Confirmation",
|
||||
"亚家族名称距离": "Subfamily Name Distance",
|
||||
"亚家族外圈弧线": "Subfamily Outer Arc",
|
||||
"亚家族确认参数": "Subfamily Confirmation Parameters",
|
||||
"交集": "Intersection",
|
||||
"仅圈图": "Circle Plot Only",
|
||||
"仅比较物种": "Comparative Species Only",
|
||||
"仅目标": "Target Only",
|
||||
"仅目标物种": "Target Species Only",
|
||||
"仅矩形图": "Rectangular Only",
|
||||
"任务列表": "Task List",
|
||||
"位置分布图": "Position Distribution Map",
|
||||
"使用拟南芥作为显式兜底": "Use Arabidopsis as Explicit Fallback",
|
||||
"使用推荐区间": "Use Recommended Range",
|
||||
"保存方法学方案": "Save Methodology Plan",
|
||||
"保留": "Retain",
|
||||
"修订": "Revision",
|
||||
"倒计时已暂停": "Countdown paused",
|
||||
"全屏": "Full Screen",
|
||||
"全屏展示": "Full Screen Display",
|
||||
"全部": "All",
|
||||
"全部行": "All Rows",
|
||||
"关系总数": "Total Edges",
|
||||
"关闭": "Close",
|
||||
"内容": "Content",
|
||||
"内置物种代码": "Built-in Species Code",
|
||||
"分析家族": "Analysis Family",
|
||||
"分组角色": "Group Role",
|
||||
"分组角色不改": "Group Role (Unchanged)",
|
||||
"删除": "Deleted",
|
||||
"删除会话": "Delete Session",
|
||||
"刷新": "Refresh",
|
||||
"刷新结果": "Refresh Results",
|
||||
"前景基因": "Foreground Genes",
|
||||
"功能类别": "Feature Category",
|
||||
"加入正式列表": "Add to Formal List",
|
||||
"包含关键词": "Contains Keyword",
|
||||
"匹配方式": "Match Mode",
|
||||
"匹配行": "Matched Rows",
|
||||
"原因": "Reason",
|
||||
"原始代码": "Original Code",
|
||||
"原始命令": "Original Command",
|
||||
"原始文件名": "Original Filename",
|
||||
"原始证据": "Original Evidence",
|
||||
"原推荐参考": "Original Recommended Reference",
|
||||
"参数": "Parameters",
|
||||
"参考分类": "Reference Classification",
|
||||
"参考前缀": "Reference Prefix",
|
||||
"参考基因": "Reference Gene",
|
||||
"参考基因编号": "Reference Gene ID",
|
||||
"参考文献": "References",
|
||||
"参考物种": "Reference Species",
|
||||
"发送": "Send",
|
||||
"取消": "Cancel",
|
||||
"取消预览": "Cancel Preview",
|
||||
"只会执行已勾选且可执行的阶段": "Only checked and executable stages will run",
|
||||
"可改": "Editable",
|
||||
"同时处理的样本数": "Number of Samples Processed Simultaneously",
|
||||
"名称": "Name",
|
||||
"后续主参考物种": "Downstream Primary Reference Species",
|
||||
"启动子元件": "Promoter Elements",
|
||||
"启动子自定义绘图": "Promoter Custom Plot",
|
||||
"图例颜色": "Legend Color",
|
||||
"图类型": "Plot Type",
|
||||
"图表标题清单": "Chart Title List",
|
||||
"图表标题驱动复现规划预览": "Chart Title-Driven Reproduction Plan Preview",
|
||||
"圆形": "Circle",
|
||||
"基因注释": "Gene Annotation",
|
||||
"基本参数": "Basic Parameters",
|
||||
"基础参数": "Basic Parameters",
|
||||
"处理中...": "Processing...",
|
||||
"处理方式": "Processing Method",
|
||||
"多物种处理方式": "Multi-species Processing",
|
||||
"大小": "Size",
|
||||
"定量模式": "Quantification Mode",
|
||||
"实验设计": "Experimental Design",
|
||||
"实验设计模块": "Experimental Design Module",
|
||||
"审核备注": "Review Notes",
|
||||
"富集类型": "Enrichment Type",
|
||||
"差异表达范围": "Differential Expression Scope",
|
||||
"已写阶段": "Registered Stages",
|
||||
"已完成": "Completed",
|
||||
"已完成阶段": "Completed Stages",
|
||||
"已应用": "Applied",
|
||||
"建议参数": "Suggested Parameters",
|
||||
"开始验证": "Start Validation",
|
||||
"弧线避让距离": "Arc Avoidance Distance",
|
||||
"当前参数": "Current Parameters",
|
||||
"当前参考物种": "Current Reference Species",
|
||||
"当前选择": "Current Selection",
|
||||
"待补数据": "Awaiting Data",
|
||||
"必填": "Required",
|
||||
"我知道了": "Got It",
|
||||
"手动区间": "Manual Range",
|
||||
"执行": "Execute",
|
||||
"扫描双链": "Scan Both Strands",
|
||||
"批量执行确认": "Batch Execution Confirmation",
|
||||
"拉丁名": "Latin Name",
|
||||
"拓展分析运行参数确认": "Extension Analysis Run Parameter Confirmation",
|
||||
"拓展分析阶段": "Extension Analysis Stage",
|
||||
"拓展分析阶段状态": "Extension Analysis Stage Status",
|
||||
"拓展分析阶段确认": "Extension Analysis Stage Confirmation",
|
||||
"拓展分析阶段运行结果": "Extension Analysis Stage Run Result",
|
||||
"按元件": "By Element",
|
||||
"按单个物种分别分析与确认": "Per-Species Analysis & Confirmation",
|
||||
"按当前筛选重建成员蛋白": "Rebuild Member Proteins by Current Filter",
|
||||
"按类别": "By Category",
|
||||
"授权发布": "Authorize Publish",
|
||||
"推荐参考数据下载失败": "Recommended Ref Data Download Failed",
|
||||
"提出修订意见": "Submit Revision Suggestions",
|
||||
"操作": "Operation",
|
||||
"数据准备": "Data Preparation",
|
||||
"数据路径": "Data Path",
|
||||
"数据需求": "Data Needs",
|
||||
"文件": "File",
|
||||
"文件类型": "File Type",
|
||||
"文件范围": "File Scope",
|
||||
"文献参数": "Literature Parameters",
|
||||
"文献工具": "Literature Tools",
|
||||
"文章涉及物种与下载入口": "Article Species & Download Entry",
|
||||
"新增": "Added",
|
||||
"方形": "Square",
|
||||
"方法参考": "Method Reference",
|
||||
"方法学文献": "Methodology Papers",
|
||||
"无": "None",
|
||||
"明确指定": "Explicitly Specify",
|
||||
"显示": "Show",
|
||||
"暂停倒计时": "Pause Countdown",
|
||||
"暂无已上传文件": "No Uploaded Files Yet",
|
||||
"暂无拓展分析阶段结果": "No Extension Analysis Stage Results Yet",
|
||||
"暂无状态记录": "No Status Record Yet",
|
||||
"最大宽度": "Max Width",
|
||||
"最小宽度": "Min Width",
|
||||
"最小非缺口比例": "Min Non-gap Ratio",
|
||||
"最近到属": "Closest to Genus",
|
||||
"最近到目": "Closest to Order",
|
||||
"最近到科": "Closest to Family",
|
||||
"最近到纲": "Closest to Class",
|
||||
"有损转换警告": "Lossy Conversion Warning",
|
||||
"服务器测试数据路径": "Server Test Data Path",
|
||||
"未从图表标题推断出额外阶段": "No Additional Stages Inferred from Chart Titles",
|
||||
"未提取到图表标题": "No Chart Title Extracted",
|
||||
"未识别到内置下载链接": "No Built-in DL Link Identified",
|
||||
"未识别到参数": "No Parameters Identified",
|
||||
"未识别到文献工具": "No Literature Tool Identified",
|
||||
"本次成员鉴定物种": "Current Member Identification Species",
|
||||
"来源": "Sources",
|
||||
"染色体标注位置": "Chromosome Annotation Position",
|
||||
"染色体标注大小": "Chromosome Annotation Size",
|
||||
"染色体策略": "Chromosome Strategy",
|
||||
"染色体色块粗细": "Chromosome Block Width",
|
||||
"查看本次知识检索过程": "View knowledge retrieval process",
|
||||
"标记大小": "Mark Size",
|
||||
"标记模式": "Mark Mode",
|
||||
"标题推断的候选阶段": "Candidate Stages Inferred from Titles",
|
||||
"树枝粗细": "Branch Width",
|
||||
"树枝颜色": "Branch Color",
|
||||
"样本并行数量": "Sample Parallel Count",
|
||||
"检索结果": "Retrieval Results",
|
||||
"检索表格内容": "Search Table Content",
|
||||
"正则匹配": "Regex Match",
|
||||
"此拓展阶段没有可配置参数": "No Configurable Parameters",
|
||||
"测试数据": "Test Data",
|
||||
"涉及阶段": "Involved Stages",
|
||||
"添加行": "Add Row",
|
||||
"灰色": "Gray",
|
||||
"物种": "Species",
|
||||
"物种代码": "Species Code",
|
||||
"物种代码不改": "Species Code (Unchanged)",
|
||||
"物种名": "Species Name",
|
||||
"物种角色": "Species Role",
|
||||
"物种角色不改": "Species Role (Unchanged)",
|
||||
"环境": "Environment",
|
||||
"留空则自动发现": "Leave empty for auto-discovery",
|
||||
"目标前缀": "Target Prefix",
|
||||
"目标物种": "Target Species",
|
||||
"知识图谱": "Knowledge Graph",
|
||||
"确定": "Confirm",
|
||||
"确认亚家族标签": "Confirm Subfamily Labels",
|
||||
"确认保存": "Confirm Save",
|
||||
"确认并写入正式配置": "Confirm & Write to Official Config",
|
||||
"确认并执行": "Confirm & Execute",
|
||||
"确认执行": "Confirm Execution",
|
||||
"确认自动注释": "Confirm Auto-Annotation",
|
||||
"确认重绘": "Confirm Replot",
|
||||
"种间共线性比较物种": "Interspecies Synteny Comparative Species",
|
||||
"种间共线性绘图设置": "Interspecies Synteny Plot Settings",
|
||||
"移除": "Remove",
|
||||
"窗口长度": "Window Length",
|
||||
"类型": "Types",
|
||||
"精确匹配": "Exact Match",
|
||||
"红色": "Red",
|
||||
"终止位点": "End Site",
|
||||
"终止残基": "End Residue",
|
||||
"绘图模式": "Plot Mode",
|
||||
"绿色": "Green",
|
||||
"置信度": "Confidence",
|
||||
"置信度阈值": "Confidence Threshold",
|
||||
"群体遗传输入": "Population Genetic Input",
|
||||
"背景来源": "Background Source",
|
||||
"背景知识": "Background knowledge",
|
||||
"自动": "Auto",
|
||||
"自动从注释提取": "Auto-extract from Annotation",
|
||||
"自动保守窗口": "Auto Conserved Window",
|
||||
"自动判断": "Auto-detect",
|
||||
"节点名称": "Node Name",
|
||||
"节点总数": "Total Nodes",
|
||||
"节点类型": "Node Types",
|
||||
"菱形": "Diamond",
|
||||
"蓝色": "Blue",
|
||||
"蛋白": "Protein",
|
||||
"蛋白文件": "Protein Files",
|
||||
"表达矩阵": "Expression Matrix",
|
||||
"诊断动作": "Diagnostic Actions",
|
||||
"说明": "Description",
|
||||
"请先试运行以记录真实输出": "Please Run a Trial First to Record Actual Output",
|
||||
"请选择共线性分析类型": "Please select synteny analysis type",
|
||||
"请选择模式物种": "Select Model Species",
|
||||
"起始位点": "Start Site",
|
||||
"起始残基": "Start Residue",
|
||||
"跳数": "Hops",
|
||||
"输出": "Output",
|
||||
"输出前缀": "Output Prefix",
|
||||
"输出标签": "Output Label",
|
||||
"运行值": "Run Value",
|
||||
"运行结果": "Run Result",
|
||||
"进化树图修订参数": "Phylogenetic Tree Revision Parameters",
|
||||
"连接关系数": "Connections",
|
||||
"迭代": "Iteration",
|
||||
"选择其他提取结果": "Select Other Extraction Result",
|
||||
"选择工具": "Select Tool",
|
||||
"选择已完成撰写的拓展阶段": "Select Completed Extension Stage",
|
||||
"通常留空": "Usually leave empty",
|
||||
"重写查询": "Rewrite Query",
|
||||
"重新生成说明": "Regenerate Description",
|
||||
"重置": "Reset",
|
||||
"重置视图": "Reset View",
|
||||
"链接": "Link",
|
||||
"链特异性": "Library Strandedness",
|
||||
"隐藏": "Hide",
|
||||
"需检查": "Needs Review",
|
||||
"需要补充": "Need to Supplement",
|
||||
"非时间实验留空": "Leave empty for non-time experiments",
|
||||
"项目": "Project",
|
||||
"预览": "Preview",
|
||||
"预览到表格": "Preview to Table",
|
||||
"预览命令": "Preview Commands",
|
||||
"黑色": "Black",
|
||||
"默认值": "Default Value",
|
||||
"提取方法学": "Extract",
|
||||
"刷新记录": "Refresh",
|
||||
"打开最新提取结果": "Open Latest Extraction",
|
||||
"查看最新提取状态": "View Latest Status",
|
||||
"打开所选提取结果": "Open Selected Extraction",
|
||||
"查看所选提取状态": "View Selected Status",
|
||||
"生成并发布": "Generate & Publish",
|
||||
"运行已发布": "Run Published",
|
||||
"当前会话": "Current Session",
|
||||
"更多会话": "More Sessions",
|
||||
"新建": "New",
|
||||
"新建会话": "New Session",
|
||||
"使用小Tip": "Tips",
|
||||
"一、分析模块快速指令": "1. Analysis Module Quick Commands",
|
||||
"选择输入框上方\"Analysis\"": "Select \"Analysis\" above input box",
|
||||
"粘贴数据位置": "Paste data location",
|
||||
"核对配置文件": "Review config files",
|
||||
"执行数据准备": "Run data preparation",
|
||||
"执行XX物种的亚家族分类": "Run subfamily classification for XX species",
|
||||
"执行XX物种的基因家族分析": "Run gene family analysis for XX species",
|
||||
"执行rnaseq分析": "Run RNA-seq analysis",
|
||||
"二、文章复现步骤": "2. Article Reproduction Steps",
|
||||
"点击\"浏览\"上传文献": "Click \"Browse\" to upload paper",
|
||||
"点击提取方法学": "Click Extract Methodology",
|
||||
"核对分析步骤": "Review analysis steps",
|
||||
"点击保存方案": "Click Save Plan",
|
||||
"上传数据": "Upload data",
|
||||
"发送\"按已保存的方法学方案继续执行\"": "Send \"Continue with saved methodology plan\"",
|
||||
"三、RAG快速指令": "3. RAG Quick Commands",
|
||||
"选择输入框上方\"RAG\"": "Select \"RAG\" above input box",
|
||||
"输入问题": "Enter question",
|
||||
"点击\"知识图谱\"查看关系": "Click \"Knowledge Graph\" to view relations",
|
||||
"知识图谱": "Knowledge Graph",
|
||||
"重新加载": "Reload",
|
||||
"重置视图": "Reset View",
|
||||
"2.2 MSA Replot / 区间重绘": "2.2 MSA Replot",
|
||||
"2.3 Tree Replot / 进化树重绘": "2.3 Tree Replot",
|
||||
"2.5 亚家族确认": "2.5 Subfamily Confirmation",
|
||||
"6.1 启动子自定义绘图": "6.1 Promoter Custom Plot",
|
||||
"7️⃣ 种内Synteny": "7️⃣ Intraspecies Synteny",
|
||||
"7.1 种内共线性 Circos 重绘": "7.1 Intraspecies Synteny Circos Replot",
|
||||
"8️⃣ Karyotype": "8️⃣ Karyotype",
|
||||
"9️⃣ 种间Synteny": "9️⃣ Interspecies Synteny",
|
||||
"基因家族": "Gene Family",
|
||||
"WGS2GWAS（遗传变异与群体分析）": "WGS2GWAS",
|
||||
"基因家族 promoter 扫描": "Gene family promoter scanning",
|
||||
"新会话": "New Session",
|
||||
"新会话已创建，请选择或创建 Working Directory": "New session created. Please select or create a Working Directory",
|
||||
"创建会话失败": "Failed to create session",
|
||||
"会话已删除": "Session deleted",
|
||||
"删除会话失败": "Failed to delete session",
|
||||
"对话历史已清空": "Chat history cleared",
|
||||
"错误日志已清空": "Error logs cleared",
|
||||
"重启 Celery": "Restart Celery",
|
||||
"重启项目": "Restart Project",
|
||||
"提交配置好的项目重启脚本": "Submit configured project restart script",
|
||||
"未配置 PLANTAI_RESTART_SCRIPT 或 restart_plantai_9000.sh": "PLANTAI_RESTART_SCRIPT or restart_plantai_9000.sh not configured",
|
||||
"未配置项目重启脚本": "Project restart script not configured",
|
||||
"这会提交项目重启脚本，当前页面可能短暂断开。": "This will submit the project restart script. The page may briefly disconnect.",
|
||||
"确认重启": "Confirm Restart",
|
||||
"项目重启脚本已提交": "Project restart script submitted",
|
||||
"项目重启未提交": "Project restart not submitted",
|
||||
"基因家族鉴定": "Gene Family Identification",
|
||||
"系统发育分析": "Phylogenetic Analysis",
|
||||
"Motif分析": "Motif Analysis",
|
||||
"结构域分析": "Domain Analysis",
|
||||
"基因结构分析": "Gene Structure Analysis",
|
||||
"启动子元件预测": "Promoter Element Prediction",
|
||||
"TF结合位点预测": "TF Binding Site Prediction",
|
||||
"种内共线性分析": "Intraspecies Synteny Analysis",
|
||||
"种间共线性分析": "Interspecies Synteny Analysis",
|
||||
"核型/染色体分布分析": "Karyotype/Chromosome Distribution",
|
||||
"PPI分析": "PPI Analysis",
|
||||
"Ka/Ks分析": "Ka/Ks Analysis",
|
||||
"蛋白理化性质与亚细胞定位": "Protein Properties & Subcellular Localization",
|
||||
"表达矩阵分析": "Expression Matrix Analysis",
|
||||
"RNA-seq QC": "RNA-seq QC",
|
||||
"RNA-seq Align": "RNA-seq Align",
|
||||
"RNA-seq Quant": "RNA-seq Quant",
|
||||
"RNA-seq Sample QC": "RNA-seq Sample QC",
|
||||
"GWAS VCF排序与HapMap转换": "GWAS VCF Sort & HapMap Conversion",
|
||||
"GWAS TASSEL亲缘关系矩阵": "GWAS TASSEL Kinship Matrix",
|
||||
"GWAS表型准备": "GWAS Phenotype Preparation",
|
||||
"GWAS协变量准备": "GWAS Covariate Preparation",
|
||||
"GWAS TASSEL MLM/CMLM": "GWAS TASSEL MLM/CMLM",
|
||||
"GWAS MLM/CMLM绘图": "GWAS MLM/CMLM Plotting",
|
||||
"GWAS EMMAX": "GWAS EMMAX",
|
||||
"GWAS EMMAX绘图": "GWAS EMMAX Plotting",
|
||||
"GWAS TASSEL GLM": "GWAS TASSEL GLM",
|
||||
"群体PCA分析": "Population PCA Analysis",
|
||||
"群体系统树分析": "Population Phylogenetic Tree",
|
||||
"群体结构分析": "Population Structure Analysis",
|
||||
"群体LD衰减分析": "Population LD Decay Analysis",
|
||||
"SNP密度分析": "SNP Density Analysis",
|
||||
"RNA-seq DE": "RNA-seq DE",
|
||||
"组合图": "Combo Plot",
|
||||
"参考亚家族分类": "Reference Subfamily Classification",
|
||||
"亚家族标签确认": "Subfamily Label Confirmation",
|
||||
"PPI/KaKs 参考数据": "PPI/KaKs Reference Data",
|
||||
"PPI/KaKs 兜底确认": "PPI/KaKs Fallback Confirmation",
|
||||
"亚家族确认输出": "Subfamily Confirmation Output",
|
||||
"MSA区间重绘": "MSA Region Replot",
|
||||
"MSA区间重绘已提交": "MSA Replot submitted",
|
||||
"MSA区间重绘完成": "MSA Replot completed",
|
||||
"MSA区间重绘失败": "MSA Replot failed",
|
||||
"启动子自定义绘图已提交": "Promoter custom plot submitted",
|
||||
"启动子自定义绘图完成": "Promoter custom plot completed",
|
||||
"启动子自定义绘图失败": "Promoter custom plot failed",
|
||||
"种内共线性 Circos 重绘已提交": "Intraspecies Circos replot submitted",
|
||||
"种内共线性 Circos 重绘完成，已切换到新图": "Intraspecies Circos replot completed, switched to new figure",
|
||||
"种内共线性 Circos 重绘失败": "Intraspecies Circos replot failed",
|
||||
"亚家族确认 - Reference Classification": "Subfamily Confirmation - Reference Classification",
|
||||
"这会停止当前 profile 的 Celery worker 并重新启动。若有任务正在运行，后端会默认拒绝执行。": "This will stop and restart the Celery worker for the current profile. Running tasks will be rejected by default.",
|
||||
"Celery 已重启并完成队列检查": "Celery restarted and queue check complete",
|
||||
"Celery 重启未完成": "Celery restart incomplete",
|
||||
// ---- Card status_label (8) ----
|
||||
"失败": "Failed",
|
||||
"运行中": "Running",
|
||||
"待确认": "Pending",
|
||||
"待执行": "Pending",
|
||||
"待核对": "Review",
|
||||
"待授权": "Authorize",
|
||||
"已取消": "Cancelled",
|
||||
// ---- Card title (10) ----
|
||||
"拓展分析候选核对": "Extension Candidate Review",
|
||||
"拓展分析说明生成失败": "Description Generation Failed",
|
||||
"正在生成拓展分析": "Generating Extension",
|
||||
"运行结果核对": "Result Review",
|
||||
"输入文件和参数": "Input Files & Parameters",
|
||||
"正在恢复拓展分析状态": "Restoring Extension State",
|
||||
// ---- Card purpose/summary (15) ----
|
||||
"原始命令、测试数据和执行事实已经保留；这里只重新生成说明，不会重新运行原始命令。": "Raw command, test data and execution facts are preserved; only regenerate description without re-running.",
|
||||
"可以直接重试，或取消后检查错误原因。": "Retry or cancel and check error cause.",
|
||||
"这张卡用于核对系统从真实执行中锁定的命令、输入、参数和输出。": "Review system-locked command, inputs, parameters and outputs from real execution.",
|
||||
"系统正在确定执行入口，并运行上传的代码和测试数据，提取不可修改的执行事实。": "Determining entry point, running uploaded code/test data, extracting immutable execution facts.",
|
||||
"原始包可复现检查中…": "Checking reproducibility of original package…",
|
||||
"这张卡用于用同一份测试数据执行已确认的工具，并生成可核对的结果。": "Run confirmed tool with same test data; generate verifiable results.",
|
||||
"确认无误后点击“开始验证”。": "Click \"Start Validation\" after confirming.",
|
||||
"这张卡用于查看实际命令、输出与日志；核对无误后才允许授权发布。": "View actual command, output and logs; publication requires review confirmation.",
|
||||
"这张卡用于确认将已经验证的工具发布为可复用的拓展分析。": "Confirm publishing validated tool as reusable extension.",
|
||||
"确认后才会发布；不会自动发布。": "Publication requires explicit confirmation; not automatic.",
|
||||
"这张卡用于确认本次新数据运行的输入文件和原始命令已有参数；确认后立即执行，不会再次弹出确认。": "Confirm input files and parameters for this run; executes immediately without re-confirmation.",
|
||||
"这张卡展示本次新数据运行生成的文件、标准输出和日志。": "Files, stdout and logs generated by this run.",
|
||||
"页面已恢复；系统继续轮询同一个操作，不会重复提交。": "Page restored; continuing to poll the same operation without re-submitting.",
|
||||
"请在页面下方的主对话输入框说明需要修订的内容，然后发送。命令和真实执行事实不会被修改。": "Describe revisions in the main chat input below. Commands and execution facts are immutable.",
|
||||
"已取消；没有提交后续执行。": "Cancelled; no further execution submitted.",
|
||||
// ---- Card rows labels (13) ----
|
||||
"实际命令": "Actual Command",
|
||||
"输出文件": "Output Files",
|
||||
"标准输出": "Standard Output",
|
||||
"见执行日志": "See execution log",
|
||||
"功能": "Function",
|
||||
"输入文件": "Input Files",
|
||||
"可改参数": "Configurable Parameters",
|
||||
"标准输出（直接展示）": "Stdout (direct display)",
|
||||
"（无文件输出）": "(No file output)",
|
||||
"（无）": "(None)",
|
||||
// ---- Card error/misc (25+) ----
|
||||
"操作失败": "Operation failed",
|
||||
"读取拓展分析说明失败": "Failed to read extension help",
|
||||
"读取拓展分析状态失败": "Failed to read extension status",
|
||||
"阶段：": "Phase: ",
|
||||
"原因：": "Cause: ",
|
||||
"无法读取操作状态": "Cannot read operation status",
|
||||
"提交失败": "Submission failed",
|
||||
"原始包可复现检查提交失败": "Reproducibility check submission failed",
|
||||
"阶段：upload": "Phase: Upload",
|
||||
"已恢复修订；请核对最新候选。": "Revision restored; please review latest candidate.",
|
||||
"✓ 语义说明已重新生成；执行命令未重新运行。": "✓ Description regenerated; command not re-run.",
|
||||
"✓ 执行入口已成功复现；候选信息已生成。": "✓ Entry point reproduced successfully; candidate info generated.",
|
||||
"✓ 验证已完成；结果核对卡已生成。": "✓ Validation complete; result review card generated.",
|
||||
"✓ 已核对运行结果。": "✓ Results reviewed.",
|
||||
"✓ 已显式授权并发布。": "✓ Explicitly authorized and published.",
|
||||
"✓ 已确认输入与参数；本次运行已完成。": "✓ Inputs and parameters confirmed; run completed.",
|
||||
"✓ 已恢复并完成；候选核对卡已生成。": "✓ Restored and completed; candidate review card generated.",
|
||||
"✓ 已恢复确认；可以开始验证。": "✓ Confirmation restored; ready to validate.",
|
||||
"✓ 已恢复验证；结果核对卡已生成。": "✓ Validation restored; result review card generated.",
|
||||
"✓ 已恢复结果核对；可以授权发布。": "✓ Review restored; ready to publish.",
|
||||
"✓ 已恢复并发布。": "✓ Restored and published.",
|
||||
"✓ 已恢复运行；本次结果卡已生成。": "✓ Run restored; result card generated.",
|
||||
"✓ 已确认候选｜未作修订": "✓ Candidate confirmed | no revision",
|
||||
"✓ 已确认候选｜已修订：": "✓ Candidate confirmed | revised: ",
|
||||
"文件上传成功，已开始生成并验收": "Upload successful; generation and validation started",
|
||||
"请填写名称并提供测试数据文件或服务器路径；原始命令和原始代码至少提供一项。": "Please provide name and test data files or server path; at least command or code is required.",
|
||||
"请写明修订意见。": "Please specify revision feedback.",
|
||||
"读取验证结果失败": "Failed to read validation results",
|
||||
"读取运行说明失败": "Failed to read run help",
|
||||
"请先选择实际运行 Job。": "Please select a job first.",
|
||||
"请填写每个输入文件。": "Please fill in each input file.",
|
||||
"已修订：": "Revised: ",
|
||||
"正在恢复 ": "Restoring ",
|
||||
"…": "…",
|
||||
" 提交失败": " submission failed",
|
||||
" 原始包可复现检查提交失败": " Reproducibility check submission failed",
|
||||
"执行入口已在隔离环境运行。请核对系统记录的事实与说明；确认后才会验证。": "Entry point ran in isolated environment. Review system-recorded facts and descriptions; validation proceeds after confirmation.",
|
||||
// ---- Agent message: status/confirm/cancel (10) ----
|
||||
"config.xlsx 已确认，继续当前目标：": "config.xlsx confirmed; continuing current goal: ",
|
||||
"✅ 已确认使用拟南芥作为 PPI/KaKs 的显式兜底参考；该选择只写入 Ortholog/PPI/KaKs 专用参数，其它常规阶段不受影响。": "✅ Arabidopsis confirmed as PPI/KaKs explicit fallback reference; affects only Ortholog/PPI/KaKs parameters.",
|
||||
"✅ 已确认自动注释，正在重新提交": "✅ Auto-annotation confirmed; re-submitting",
|
||||
"✅ 已选择项目参考物种": "✅ Project reference species selected",
|
||||
"已停止等待，本次未继续获取回答。": "Stopped waiting; no further response.",
|
||||
"抱歉，我没有理解你的意思。请尝试更详细地描述。": "Sorry, I didn't understand. Please try describing in more detail.",
|
||||
"抱歉，服务暂时不可用，请稍后重试。": "Sorry, service temporarily unavailable. Please try again later.",
|
||||
// ---- Agent message: pause/block/skip (13) ----
|
||||
"⏸️ PPI/KaKs 前置数据检查未通过，已暂停批量执行；请补齐参考注释包或确认参考物种后重新执行。": "⏸️ PPI/KaKs prerequisite check failed; batch paused. Add reference annotation or confirm reference species.",
|
||||
"⏸️ identify 已完成，但方法学链路需要先确认基因家族成员表；保存成员确认后再继续 phylogeny。": "⏸️ identify completed; methodology chain requires confirmed gene family members before continuing phylogeny.",
|
||||
"⏸️ 已打开 identify 成员初筛确认表；保存后会生成 curated_members，再继续亚家族证据阶段。": "⏸️ identify member confirmation table opened; save to generate curated_members, then continue subfamily evidence stages.",
|
||||
"⏸️ 当前已有前台批次执行中；WGS 规划已保留，请在当前批次结束后重新执行。": "⏸️ Foreground batch in progress; WGS plan saved. Re-run after current batch finishes.",
|
||||
"，其它阶段继续执行。": ", other stages continue.",
|
||||
"⏸️ 已按选择先暂停 Ortholog/PPI/KaKs，其它阶段继续执行。": "⏸️ Paused Ortholog/PPI/KaKs as selected; other stages continue.",
|
||||
"⏹️ 后端预检失败，当前批次已停止；请重新拉取规划后继续。": "⏹️ Backend pre-check failed; batch stopped. Re-pull plan to continue.",
|
||||
// ---- Agent message: replan/continue (5) ----
|
||||
"🔁 亚家族标签已确认，正在重新规划确认后常规基因家族分析...": "🔁 Subfamily labels confirmed; re-planning post-confirmation gene family analysis...",
|
||||
"确认后常规分析没有新的可执行阶段。": "No new executable stages after confirmation.",
|
||||
// ---- Agent message: submit/execute (7) ----
|
||||
"⚙️ 提交阶段: ": "⚙️ Submitting stage: ",
|
||||
"按 per_species 拆分 ": "Split by per_species ",
|
||||
// ---- Agent message: complete/success (7) ----
|
||||
"✅ PPI/KaKs 前置数据检查通过：当前批次已有 Ortholog，将先生成同源映射再继续下游分析。": "✅ PPI/KaKs check passed: Ortholog exists in current batch; generating mapping first.",
|
||||
// ---- Agent message: download/background (5) ----
|
||||
"⬇️ 正在提交推荐近源参考物种注释包后台下载；Ortholog/PPI/KaKs 将等待参考数据，其它阶段继续执行。": "⬇️ Submitting reference annotation download; Ortholog/PPI/KaKs wait for data, other stages continue.",
|
||||
// ---- Agent message: autofill (2) ----
|
||||
"已根据上传文件生成 samples.yaml 草稿。请在弹窗中核对 run、sample_id、condition、replicate、链特异性和分组角色，确认后再写入正式 samples.yaml。": "samples.yaml draft generated. Review run, sample_id, condition, replicate, strand specificity and group roles in the dialog, then confirm to write.",
|
||||
"已根据上传文件生成 config.xlsx 草稿。请在弹窗中核对物种代码、文件类型、物种角色和 Gene_Family，确认后再写入正式 config.xlsx。": "config.xlsx draft generated. Review species code, file type, species role and Gene_Family in the dialog, then confirm to write.",
|
||||
// ---- Agent message: methodology (4) ----
|
||||
"已保存方法学方案到当前 job。下一步请上传/填写目标物种和参考物种数据，并确认 config.xlsx 后再执行方法学流程。": "Methodology plan saved. Next: upload target/reference species data, confirm config.xlsx, then execute.",
|
||||
"❌ 方法学执行规划失败：": "❌ Methodology execution planning failed: ",
|
||||
// ---- Agent message: replot/revision (4 to fix) ----
|
||||
"进化树图重绘已提交：": "Phylogeny tree redraw submitted: ",
|
||||
"进化树图重绘失败：": "Phylogeny tree redraw failed: ",
|
||||
"Combo 图修订已提交：": "Combo plot revision submitted: ",
|
||||
"Combo 图修订失败：": "Combo plot revision failed: ",
|
||||
// ---- Agent message: failure/interrupt (10) ----
|
||||
"无法执行分析：": "Cannot execute analysis: ",
|
||||
"服务暂时不可用：": "Service temporarily unavailable: ",
|
||||
"⚠️ 批量执行完成：成功 ": "⚠️ Batch complete: success ",
|
||||
"⚠️ 以下阶段因依赖失败被跳过: ": "⚠️ Stages skipped due to dependency failure: ",
|
||||
"⚠️ 以下阶段等待上游暂停项处理后继续: ": "⚠️ Stages waiting for upstream paused items: ",
|
||||
"未生成可执行阶段。未检测到当前 scope 的完成结果时，不再把空计划解释为已完成；请检查阶段名称或前置依赖。": "No executable stages generated. Empty plan is not interpreted as completed. Check stage names or dependencies.",
|
||||
// ---- Agent message: extension analysis (6) ----
|
||||
"拓展分析阶段：": "Extension stage: ",
|
||||
"拓展分析阶段失败：": "Extension stage failed: ",
|
||||
"已执行拓展分析阶段：": "Extension stage executed: ",
|
||||
"拓展分析阶段执行失败：": "Extension stage execution failed: ",
|
||||
"拓展分析帮助暂时不可用：": "Extension help temporarily unavailable: ",
|
||||
"上传可执行代码、测试数据和原始命令，核对候选后验证并授权发布；发布后可指定输入和原命令已有参数运行。": "Upload executable code, test data and original command; review candidate, validate, then authorize publishing.",
|
||||
// ---- Agent message: other (5) ----
|
||||
"📌 当前已有前台批次执行中，新任务已转为后台执行：": "📌 Foreground batch running; new task moved to background: ",
|
||||
"已识别到 RNA-seq/FASTQ 和参考资源": "RNA-seq/FASTQ and reference resources detected",
|
||||
"已把目录中的可识别参考资源导入当前 job": "Reference resources imported into current job",
|
||||
"我识别到你是在提供数据路径，但该路径下没有发现": "Data path detected but no usable files found",
|
||||
"已选择：": "Selected: ",
|
||||
// ---- Agent message: remaining dynamic patterns ----
|
||||
"❌ 批量执行已取消": "❌ Batch execution cancelled",
|
||||
"⏭️ 跳过阶段: ": "⏭️ Skipped stage: ",
|
||||
"🚀 准备提交依赖驱动执行，共 ": "🚀 Preparing dependency-driven execution: ",
|
||||
"🎉 批量执行完成！成功: ": "🎉 Batch complete! Success: ",
|
||||
"，失败 ": ", failed ",
|
||||
"跳过阶段: ": "Skipped stage: ",
|
||||
" 暂停：需要先准备参考物种 PEP/CDS 或 Ortholog 映射。": " paused: prepare reference species PEP/CDS or Ortholog mapping first.",
|
||||
" 已暂停依赖 confirmed_subfamily.tsv 的后续阶段；请在亚家族确认表中保存后重新拉取规划继续执行。": " paused subsequent stages depending on confirmed_subfamily.tsv; save the subfamily confirmation table and re-pull the plan.",
|
||||
"参考数据已就绪": "Reference data ready",
|
||||
" 已恢复为待执行，将随当前批次继续调度。": " restored as pending; will continue with current batch.",
|
||||
" 开始续跑 Ortholog/PPI/KaKs。": " resuming Ortholog/PPI/KaKs.",
|
||||
" 重新提交（自动注释背景）": " re-submit (auto-annotation background)",
|
||||
" 已提交后端，task_id=": " submitted to backend, task_id=",
|
||||
" 准备执行 ": " preparing to execute ",
|
||||
" 个阶段，请确认参数": " stages; please confirm parameters",
|
||||
" 个阶段...": " stages...",
|
||||
" 个分析阶段，请确认参数": " analysis stages; please confirm parameters",
|
||||
"亚家族确认后已规划 ": "Post-subfamily-confirmation plan: ",
|
||||
" 个常规分析阶段": " regular analysis stages",
|
||||
"PPI/KaKs 前置数据检查通过：检测到已下载近源参考 ": "PPI/KaKs check passed: downloaded reference ",
|
||||
"，将用该参考先生成 Ortholog mapping。": ", generating Ortholog mapping first.",
|
||||
"PPI/KaKs 前置数据检查通过：检测到已有 Ortholog 映射（": "PPI/KaKs check passed: Ortholog mapping exists (",
|
||||
"），将复用该映射执行 ": "), reusing mapping for ",
|
||||
"），将直接执行 ": "), executing directly ",
|
||||
"），已自动插入 Ortholog，将先生成 mapping 再执行 ": "), Ortholog auto-inserted; generating mapping then executing ",
|
||||
"，已自动插入 Ortholog": ", Ortholog auto-inserted",
|
||||
"推荐参考数据下载完成：": "Reference download complete: ",
|
||||
"）。已写入 Ortholog/PPI/Ka/Ks 专用参考物种。": "). Written to Ortholog/PPI/Ka/Ks specific reference species.",
|
||||
" 已按用户确认使用 bcftools 完成": " completed with bcftools as confirmed by user",
|
||||
" 前端连接短暂中断，正在按后端产物状态恢复": " frontend connection interrupted; recovering from backend state",
|
||||
"亚家族确认已完成，但后端当前 workflowPhase 为 ": "Subfamily confirmation completed; backend workflowPhase is ",
|
||||
"，未自动打开常规分析。": "; no auto-analysis opened.",
|
||||
"亚家族分类已完成预测，但确认表尚未保存；": "Subfamily classification predicted; confirmation table not yet saved; ",
|
||||
"已调出": "Opened ",
|
||||
"亚家族分类确认表。你可以在弹窗中修订 confirmed_subfamily，点击\"确认亚家族标签\"后保存。": " subfamily classification confirmation table. Revise confirmed_subfamily in the dialog, then click \"Confirm Subfamily Labels\" to save.",
|
||||
"亚家族分类确认表没有打开：未找到可确认的分类结果。请先确认该物种已完成 reference_classification。": " subfamily classification confirmation table not opened: no confirmable results found. Confirm the species has completed reference_classification.",
|
||||
"确认后常规分析没有新的可执行阶段。": "No new executable stages after confirmation.",
|
||||
"⚠️ 检测到 ": "⚠️ Detected ",
|
||||
"，将在确认后启动本地自动注释。": "; auto-annotation will start after confirmation.",
|
||||
"🧬 自动背景注释与 ": "🧬 Auto-background annotation and ",
|
||||
" 已提交后端，task_id=": " submitted to backend, task_id=",
|
||||
"⚠️ 亚家族确认后自动续跑规划失败：": "⚠️ Post-subfamily-confirm auto-plan failed: ",
|
||||
"; Ortholog/PPI/KaKs ": "; Ortholog/PPI/KaKs ",
|
||||
"推荐参考数据下载已转入后台：": "Reference download moved to background: ",
|
||||
"，task_id=": ", task_id=",
|
||||
"后台批次完成：成功 ": "Background batch complete: success ",
|
||||
"后台执行阶段: ": "Background stage: ",
|
||||
"后台阶段 ": "Background stage ",
|
||||
" 完成": " done",
|
||||
"已保存方法学方案，但暂不执行：": "Methodology plan saved, not executing: ",
|
||||
"。请在 config.xlsx 自动识别弹窗中核对/补齐数据，确认写入正式配置后再点击\"确认并执行\"。": ". Review/fill data in the config.xlsx auto-detect dialog, confirm to write then click \"Confirm & Execute\".",
|
||||
"当前已有前台批次执行中；WGS 规划已保留，请在当前批次结束后重新执行。": "Foreground batch in progress; WGS plan saved. Re-run after current batch finishes.",
|
||||
"拓展分析阶段执行失败：": "Extension stage execution failed: ",
|
||||
"已把路径中的 ": "Soft-linked ",
|
||||
" 个可识别文件软链接到当前 job": " recognizable files to current job",
|
||||
" 个可识别文件软链接到当前 job，但没有发现需要自动填写 config.xlsx 或 samples.yaml 的文件类型；请检查目录或继续补充文件。": " recognizable files linked to current job; no files found for config.xlsx/samples.yaml auto-fill. Check directory or add more files.",
|
||||
"前": " ago",
|
||||
"秒前": "sec ago",
|
||||
"分钟前": "min ago",
|
||||
"小时前": "hr ago",
|
||||
"天前": "d ago",
|
||||
"待机": "Idle",
|
||||
"分析中": "Analyzing",
|
||||
"检索中": "Retrieving",
|
||||
"反思中": "Reflecting",
|
||||
"生成中": "Generating",
|
||||
"完成": "Complete",
|
||||
"错误": "Error",
|
||||
"处理中...": "Processing...",
|
||||
"发送": "Send",
|
||||
"任务列表": "Tasks",
|
||||
" 个常规分析阶段，请确认参数": " regular analysis stages; please confirm parameters",
|
||||
" 亚家族分类已完成预测，但确认表尚未保存；后续会继续显示为待确认。": " subfamily classification predicted; confirmation table not yet saved; will show as pending.",
|
||||
" 到后端；系统会先生成 ": " to backend; system will generate ",
|
||||
" 前端连接短暂中断，正在按后端产物状态恢复，不会立即判定阶段失败": " frontend connection interrupted; recovering from backend artifact state. Stage will not be marked as failed.",
|
||||
" 已有同一分析范围的有效结果，无需重复执行。": " already has valid results for the same analysis scope. No need to re-execute.",
|
||||
" 的依赖尚未完成": " dependency not yet completed",
|
||||
" 重新提交（自动注释背景）...": " re-submitting (auto-annotation background)...",
|
||||
" 提交失败": " submission failed",
|
||||
" 原始包可复现检查提交失败": " reproducibility check submission failed",
|
||||
"Combo 图修订已提交：task_id=": "Combo plot revision submitted: task_id=",
|
||||
"⏳ 推荐参考数据下载已转入后台：": "⏳ Reference download moved to background: ",
|
||||
"⏸️ 以下阶段等待上游暂停项处理后继续: ": "⏸️ Stages waiting for upstream paused items: ",
|
||||
"⚙️ 亚家族确认后已规划 ": "⚙️ Post-subfamily-confirm plan: ",
|
||||
"⚙️ 准备执行 ": "⚙️ Preparing to execute ",
|
||||
"⚙️ 后台执行阶段: ": "⚙️ Background stage: ",
|
||||
"⚠️ 后台批次中以下阶段因依赖失败被跳过: ": "⚠️ Background batch stages skipped due to dependency failure: ",
|
||||
"✅ PPI/KaKs 前置数据检查通过：检测到已下载近源参考 ": "✅ PPI/KaKs check passed: downloaded reference ",
|
||||
"✅ PPI/KaKs 前置数据检查通过：检测到已有 Ortholog 映射（": "✅ PPI/KaKs check passed: Ortholog mapping found (",
|
||||
"✅ 后台阶段 ": "✅ Background stage ",
|
||||
"✅ 已确认自动注释，正在重新提交 ": "✅ Auto-annotation confirmed; re-submitting ",
|
||||
"✅ 已选择项目参考物种 ": "✅ Selected project reference species: ",
|
||||
"✅ 推荐参考数据下载完成：": "✅ Reference download complete: ",
|
||||
"✅ 阶段 ": "✅ Stage ",
|
||||
"☒ 已恢复并完成。": "☒ Restored and completed.",
|
||||
"❌ 无法执行分析：": "❌ Cannot execute analysis: ",
|
||||
"❌ 服务暂时不可用：": "❌ Service temporarily unavailable: ",
|
||||
"。结果已写入当前 job workspace，输出：": ". Results written to current job workspace, output: ",
|
||||
"。请在 config.xlsx 自动识别弹窗中核对/补齐数据，确认写入正式配置后再点击“确认并执行”。": ". Review/fill data in the config.xlsx auto-detect dialog; confirm to write then click \"Confirm & Execute\".",
|
||||
"亚家族分类确认表。你可以在弹窗中修订 confirmed_subfamily，点击“确认亚家族标签”后保存。": "subfamily classification confirmation table. Revise confirmed_subfamily in the dialog, then click \"Confirm Subfamily Labels\" to save.",
|
||||
"亚家族标签确认被跳过，已停止依赖 confirmed_subfamily.tsv 的后续阶段；如需普通无亚家族标签分析，请重新发起并明确说明\"不需要亚家族\"。": "Subfamily label confirmation skipped; subsequent stages depending on confirmed_subfamily.tsv have been stopped. For regular analysis without subfamily labels, please restart and explicitly state \"no subfamily\".",
|
||||
"发送\"按已保存的方法学方案继续执行\"": "Send \"Continue with saved methodology plan\"",
|
||||
"后台批次无法继续：": "Background batch cannot continue: ",
|
||||
"已打开 config.xlsx 自动识别表。你可以直接修订单行，或用批量修订区筛选、预览、Apply。": "Opened config.xlsx auto-identification table. You can edit individual rows, or use the batch revision area to filter, preview, and Apply.",
|
||||
"已打开 samples.yaml 自动识别表。你可以直接修订样本、分组、重复和对照组。": "Opened samples.yaml auto-identification table. You can revise samples, groups, replicates and controls directly.",
|
||||
"已把目录中的可识别参考资源导入当前 job，并生成 config.xlsx 草稿。请在弹窗中核对和修订，点击“确认并写入正式配置”后再执行正式分析。": "Imported recognizable reference resources into current job and generated config.xlsx draft. Please review and revise in the dialog, then click \"Confirm & Write to Official Config\" before executing.",
|
||||
"已识别到 RNA-seq FASTQ 和参考资源，优先打开 samples.yaml 草稿供你核对样本、分组和对照；config.xlsx 草稿也已生成。": "RNA-seq FASTQ and reference resources detected; opening samples.yaml draft for sample/group/control review. config.xlsx draft also generated.",
|
||||
"已识别到 RNA-seq/FASTQ 数据并生成 samples.yaml 草稿。请在弹窗中核对 run、sample_id、condition、replicate、control_group 后再写入正式 samples.yaml。": "RNA-seq/FASTQ data detected and samples.yaml draft generated. Review run, sample_id, condition, replicate, control_group in the dialog, then confirm to write.",
|
||||
"已重新识别并生成 config.xlsx 草稿。请在弹窗中核对并修订，确认后才会写入正式 config.xlsx。": "Re-identified and generated config.xlsx draft. Review and revise in the dialog; writes to official config.xlsx only after confirmation.",
|
||||
"已重新识别并生成 samples.yaml 草稿。请确认 run、sample_id、condition、replicate 和 control_group 后再写入正式 samples.yaml。": "Re-identified and generated samples.yaml draft. Confirm run, sample_id, condition, replicate, and control_group before writing to official samples.yaml.",
|
||||
"没有找到可展示的结果。": "No displayable results found.",
|
||||
"点击\"浏览\"上传文献": "Click \"Browse\" to upload paper",
|
||||
"点击\"知识图谱\"查看关系": "Click \"Knowledge Graph\" to view relations",
|
||||
"请先核对 config.xlsx 草稿。": "Please review the config.xlsx draft first.",
|
||||
"请补充你的需求。": "Please clarify your requirements.",
|
||||
"进化树图重绘已提交：task_id=": "Phylogeny tree redraw submitted: task_id=",
|
||||
"选择输入框上方\"Analysis\"": "Select \"Analysis\" above the input box",
|
||||
"选择输入框上方\"RAG\"": "Select \"RAG\" above the input box",
|
||||
"，再继续富集分析。": ", then continue enrichment analysis.",
|
||||
"，将用该参考先生成 Ortholog mapping。": ", will generate Ortholog mapping from this reference first.",
|
||||
"；Ortholog/PPI/KaKs 已恢复为待执行，将随当前批次继续调度。": "; Ortholog/PPI/KaKs restored as pending; will continue with current batch.",
|
||||
"，将按该参考检查或生成 Ortholog，并执行 ": "; will check or generate Ortholog from this reference, and execute ",
|
||||
"；开始续跑 Ortholog/PPI/KaKs。": "; resuming Ortholog/PPI/KaKs.",
|
||||
"），将复用该映射执行 ": "), will reuse this mapping and execute ",
|
||||
"），将直接执行 ": "), will execute directly ",
|
||||
"，已自动插入 Ortholog，将先生成 mapping 再执行 ": ", Ortholog auto-inserted; generating mapping first then executing ",
|
||||
"）。已写入 Ortholog/PPI/Ka/Ks 专用参考物种。": "). Written to Ortholog/PPI/Ka/Ks specific reference species.",
|
||||
" 已按用户确认使用 bcftools 完成": " completed with bcftools as user confirmed",
|
||||
" 已暂停依赖 confirmed_subfamily.tsv 的后续阶段；请在亚家族确认表中保存后重新拉取规划继续执行。": " has paused subsequent stages depending on confirmed_subfamily.tsv; save the subfamily confirmation table and re-pull the plan.",
|
||||
" 暂停：需要先准备参考物种 PEP/CDS 或 Ortholog 映射。": "paused: prepare reference species PEP/CDS or Ortholog mapping first.",
|
||||
" 个分析阶段，请确认参数": " analysis stages, please confirm parameters",
|
||||
"📦 后台批次完成：成功 ": "📦 Background batch complete: success ",
|
||||
"🔄 阶段 ": "🔄 Stage ",
|
||||
"🚀 阶段 ": "🚀 Stage ",
|
||||
"config.xlsx 已确认，继续当前目标：": "config.xlsx confirmed; continuing current goal: ",
|
||||
"按 per_species 拆分 ": "Split by per_species ",
|
||||
"⚠️ 检测到 ": "⚠️ Detected ",
|
||||
"，将在确认后启动本地自动注释。": "; auto-annotation will start after confirmation.",
|
||||
"。已写入 Ortholog/PPI/Ka/Ks 专用参考物种。": ". Written to Ortholog/PPI/Ka/Ks specific reference species.",
|
||||
"🚀 准备提交依赖驱动执行，共 ": "🚀 Preparing dependency-driven execution: ",
|
||||
" 个阶段...": " stages...",
|
||||
"⚠️ 批量执行完成：成功 ": "⚠️ Batch complete: success ",
|
||||
"，失败 ": ", failed ",
|
||||
"🎉 批量执行完成！成功: ": "🎉 Batch complete! Success: ",
|
||||
"⏭️ 跳过阶段: ": "⏭️ Skipped stage: ",
|
||||
"⚙️ 提交阶段: ": "⚙️ Submitting stage: ",
|
||||
"⏭️ ": "⏭️ ",
|
||||
" 已提交后端，task_id=": " submitted to backend, task_id=",
|
||||
" 完成": " complete",
|
||||
"，task_id=": ", task_id=",
|
||||
"⚠️ 亚家族确认后自动续跑规划失败：": "⚠️ Post-subfamily-confirm auto-plan failed: ",
|
||||
"亚家族确认已完成，但后端当前 workflowPhase 为 ": "Subfamily confirmation complete; backend workflowPhase is ",
|
||||
"，未自动打开常规分析。": "; no auto-analysis opened.",
|
||||
"已调出": "Opened: ",
|
||||
"亚家族分类确认表没有打开：未找到可确认的分类结果。请先确认该物种已完成 reference_classification。": "Subfamily classification confirmation table not opened: no confirmable results found. Confirm the species has completed reference_classification.",
|
||||
"拓展分析帮助暂时不可用：": "Extension help temporarily unavailable: ",
|
||||
"已保存方法学方案，但暂不执行：": "Methodology plan saved; not executing: ",
|
||||
"🧬 自动背景注释与 ": "🧬 Auto-background annotation and ",
|
||||
"参考数据已就绪": "Reference data ready",
|
||||
"Combo 图修订失败：": "Combo plot revision failed: ",
|
||||
"进化树图重绘失败：": "Phylogeny tree redraw failed: ",
|
||||
"，其它阶段继续执行。": ", other stages continue.",
|
||||
" 个阶段，请确认参数": " stages, please confirm parameters",
|
||||
"—": "—",
|
||||
"✓ 已恢复并完成。": "✓ Restored and completed.",
|
||||
"后台批次完成：成功 ": "Background batch complete: success ",
|
||||
"后台执行阶段: ": "Background stage: ",
|
||||
"拓展分析阶段执行失败：": "Extension stage execution failed: ",
|
||||
"拓展分析阶段：": "Extension stage: ",
|
||||
"已执行拓展分析阶段：": "Extension stage executed: ",
|
||||
"拓展分析阶段失败：": "Extension stage failed: ",
|
||||
"MSA区间重绘已提交": "MSA replot submitted",
|
||||
"MSA区间重绘失败": "MSA replot failed",
|
||||
"已选择：": "Selected: ",
|
||||
"📌 当前已有前台批次执行中，新任务已转为后台执行：": "📌 Foreground batch running; new task moved to background: ",
|
||||
"，已自动插入 Ortholog，将先生成 mapping 再执行": ", Ortholog auto-inserted; generating mapping first then executing",
|
||||
"推荐参考数据下载完成：": "Reference download complete: ",
|
||||
"ABORTED": "ABORTED",
|
||||
"的依赖尚未完成": "dependency not yet completed",
|
||||
"亚家族标签确认被跳过，已停止依赖 confirmed_subfamily.tsv 的后续阶段；如需普通无亚家族标签分析，请重新发起并明确说明": "Subfamily label confirmation skipped; stages depending on confirmed_subfamily.tsv stopped. For regular analysis without subfamily labels, restart and explicitly state: ",
|
||||
"不需要亚家族": "no subfamily",
|
||||
"。": ".",
|
||||
"，将复用该映射执行 ": ", will reuse this mapping and execute ",
|
||||
"；将按该参考检查或生成 Ortholog，并执行 ": "; will check or generate Ortholog from this reference, and execute ",
|
||||
"⚠️ 以下阶段因依赖失败被跳过: ": "⚠️ Stages skipped due to dependency failure: ",
|
||||
"⚠️ 以下阶段等待上游暂停项处理后继续: ": "⚠️ Stages waiting for upstream paused items: ",
|
||||
"启动子自定义绘图已提交": "Promoter custom plot submitted",
|
||||
"启动子自定义绘图失败": "Promoter custom plot failed",
|
||||
"种内共线性 Circos 重绘已提交": "Intraspecies Circos replot submitted",
|
||||
"种内共线性 Circos 重绘失败": "Intraspecies Circos replot failed",
|
||||
" 重新提交（自动注释背景）": " re-submit (auto-annotation background)",
|
||||
" 已暂停依赖 confirmed_subfamily.tsv": " has paused stages depending on confirmed_subfamily.tsv",
|
||||
"；": ";",
|
||||
" 个分析阶段": " analysis stages",
|
||||
" 个阶段": " stages",
|
||||
|
||||
// ===== 阶段 7：ElMessage/ElMessageBox i18n keys =====
|
||||
// 注意：key 为中文原文（zh 模式直接返回 key），value 为 English
|
||||
// tp() 类 key 需要同时注册变量 placeholder 版本和 static 文案
|
||||
|
||||
// ElMessageBox
|
||||
"删除会话": "Delete Session",
|
||||
"取消 PPI": "Cancel PPI",
|
||||
"自动注释并继续": "Auto-annotate & Continue",
|
||||
"我先去上传背景文件": "Upload Background Files First",
|
||||
"确认设计并写入": "Confirm Design & Write",
|
||||
"返回修改": "Return to Modify",
|
||||
"确认第一候选": "Confirm First Candidate",
|
||||
"使用 bcftools 重试": "Retry with bcftools",
|
||||
"GATK 执行失败": "GATK Execution Failed",
|
||||
"确认 DE 分析设计": "Confirm DE Analysis Design",
|
||||
"确认 PPI 的 STRING 近源参考物种": "Confirm STRING Close Reference Species for PPI",
|
||||
|
||||
// autoAnnotation 标题
|
||||
"GO/KEGG 富集背景缺失": "GO/KEGG Enrichment Background Missing",
|
||||
"KEGG 富集背景缺失": "KEGG Enrichment Background Missing",
|
||||
"GO 富集背景缺失": "GO Enrichment Background Missing",
|
||||
"RNA-seq 富集背景缺失": "RNA-seq Enrichment Background Missing",
|
||||
|
||||
// 会话管理
|
||||
"示例下载功能当前不可用": "Example download is currently unavailable",
|
||||
"已Clear当前会话": "Current session cleared",
|
||||
|
||||
// autoFill
|
||||
"请至少填写一个要预览修改的字段": "Please fill at least one field to preview modifications",
|
||||
"没有匹配的草稿行": "No matching draft rows",
|
||||
"请先预览要应用的修改": "Please preview modifications before applying",
|
||||
"请先生成或加载草稿": "Please generate or load a draft first",
|
||||
"生成草稿失败": "Failed to generate draft",
|
||||
"确认失败": "Confirmation failed",
|
||||
"已写入正式 config.xlsx": "Formal config.xlsx written",
|
||||
"已写入正式 samples.yaml": "Formal samples.yaml written",
|
||||
"请输入文件路径": "Please enter file path",
|
||||
"加载失败": "Load failed",
|
||||
|
||||
// RAG 解读
|
||||
"请求解读服务失败": "Interpretation service request failed",
|
||||
"RAG解读已刷新": "RAG interpretation refreshed",
|
||||
"RAG解读刷新失败": "RAG interpretation refresh failed",
|
||||
"下载报告失败": "Failed to download report",
|
||||
"JSON数据已加载到控制台": "JSON data loaded to console",
|
||||
"解读内容已复制": "Interpretation content copied",
|
||||
"复制失败": "Copy failed",
|
||||
|
||||
// 知识图谱
|
||||
"知识图谱加载完成": "Knowledge graph loaded",
|
||||
"未找到匹配的节点": "No matching node found",
|
||||
"视图已重置": "View reset",
|
||||
"请先通过问答加载子图，或点击「重新加载」": "Please load subgraph via Q&A first, or click Reload",
|
||||
|
||||
// PPI/STRING
|
||||
"当前没有可用 job_id": "No job_id currently available",
|
||||
"该 ID 已存在": "This ID already exists",
|
||||
"至少保留一个 gene ID": "Keep at least one gene ID",
|
||||
|
||||
// Working Directory
|
||||
"切换失败": "Switch failed",
|
||||
|
||||
// 图片/可视化
|
||||
"请先选择一张图片": "Please select an image first",
|
||||
"无法确定启动子输出前缀。": "Cannot determine promoter output prefix.",
|
||||
"请至少选择一个启动子元件或类别。": "Please select at least one promoter element or category.",
|
||||
"请至少选择一种图类型。": "Please select at least one plot type.",
|
||||
"无法确定进化树输出标签，请先选择树图或填写输出标签。": "Cannot determine phylogeny tree output label. Please select a tree image or fill in the output label first.",
|
||||
"进化树图重绘完成，已切换到新图": "Phylogeny tree replot complete; switched to new image",
|
||||
"无法确定种内共线性输出标签，请先选择 Circos 图。": "Cannot determine intraspecies synteny output label. Please select a Circos image first.",
|
||||
"无法确定 combo 输出标签，请先选择 combo 图。": "Cannot determine combo output label. Please select a combo image first.",
|
||||
"Combo 修订至少选择两个类型。": "Combo revision requires at least two panel types.",
|
||||
"Combo 图修订完成，已切换到新图": "Combo plot revision complete; switched to new image",
|
||||
"无法确定MSA输出标签，请先选择对应图片或填写输出标签。": "Cannot determine MSA output label. Please select corresponding image or fill in output label.",
|
||||
"请填写MSA alignment 起始列和终止列，或选择其他模式。": "Please fill in MSA alignment start/end columns or choose another mode.",
|
||||
"请填写参考基因及其起止残基编号。": "Please fill in reference gene and its start/end residue numbers.",
|
||||
|
||||
// GWAS/诊断
|
||||
"请填写 GWAS 物种简称（用于结果前缀）": "Please fill in GWAS species abbreviation (for result prefix)",
|
||||
"请先选择有效 VCF": "Please select a valid VCF first",
|
||||
"请先SelectAnalysis Stage": "Please select an analysis stage first",
|
||||
"诊断未发现明确问题，请查看阶段错误日志。": "Diagnosis found no clear issues. Please check stage error logs.",
|
||||
"诊断仅提示信息，无需确认修复。": "Diagnosis is informational only; no fix confirmation needed.",
|
||||
"✅ 已应用修复方案，继续执行...": "✅ Fix applied; continuing execution...",
|
||||
"❌ 应用修复失败": "❌ Fix application failed",
|
||||
"❌ 网络错误，请重试": "❌ Network error; please retry",
|
||||
"⏸ 已跳过修复；该问题会阻断下游，后续阶段已暂停。": "⏸ Fix skipped; issue blocks downstream; subsequent stages paused.",
|
||||
"已关闭诊断提示。": "Diagnosis prompt closed.",
|
||||
|
||||
// 任务/消息
|
||||
"当前消息未成功写入会话历史，刷新后可能丢失": "Message not persisted to session history; may be lost on refresh",
|
||||
"路径已复制": "Path copied",
|
||||
|
||||
// 拓展分析
|
||||
"当前筛选没有成员，未重建 final_members。": "No members matching current filter; final_members not rebuilt.",
|
||||
"当前选择为按物种分别分析，但后端没有返回完整的分物种亚家族结果；将尝试打开可用的联合结果。": "Per-species analysis selected but backend returned incomplete results; attempting to open available joint results.",
|
||||
"亚家族预测已完成，但未能自动打开确认表；请发送\"调出亚家族确认表\"手动打开。": "Subfamily prediction completed but confirmation table could not open automatically; please send \"show subfamily review table\" manually.",
|
||||
"没有可确认的亚家族标签。": "No subfamily labels to confirm.",
|
||||
"已请求停止当前拓展分析；状态仍会继续轮询直到进程退出。": "Stop requested for current extension; polling will continue until process exits.",
|
||||
"No running task to stop": "No running task to stop",
|
||||
"Task(s) stopped (backend + Celery when available)": "Task(s) stopped (backend + Celery when available)",
|
||||
"File uploaded successfully": "File uploaded successfully",
|
||||
"未检测到可用文件": "No usable files detected",
|
||||
"请先生成拓展分析阶段。": "Please generate the extension stage first.",
|
||||
"发布前验收已通过": "Pre-publish validation passed",
|
||||
"请填写名称，并上传原始代码。": "Please provide name and upload source code.",
|
||||
"拓展分析阶段已生成并发布": "Extension stage generated and published",
|
||||
"确认已保存": "Confirmation saved",
|
||||
"验证成功": "Validation successful",
|
||||
"验证未通过": "Validation not passed",
|
||||
"拓展分析阶段已发布": "Extension stage published",
|
||||
"拓展分析阶段执行完成": "Extension stage execution complete",
|
||||
"拓展分析阶段执行未成功，请查看结果日志": "Extension stage execution incomplete; please check result logs",
|
||||
"该阶段已在正式列表中": "This stage is already in the formal list",
|
||||
"已加入正式阶段列表，并默认纳入本次执行": "Added to formal stage list and included in this execution",
|
||||
|
||||
// 方法学
|
||||
"请先选择 PDF 或 MinerU content_list JSON 文献文件": "Please select a PDF or MinerU content_list JSON literature file first",
|
||||
"方法学提取启动失败": "Methodology extraction failed to start",
|
||||
"方法学 sandbox 示例读取失败": "Failed to read methodology sandbox examples",
|
||||
"请先选择或输入 methodology_dir": "Please select or enter methodology_dir first",
|
||||
"方法学 sandbox 已构建": "Methodology sandbox built",
|
||||
"请先构建临时库": "Please build the sandbox first",
|
||||
"请输入方法学问题": "Please enter methodology question",
|
||||
"方法学 sandbox 查询失败": "Methodology sandbox query failed",
|
||||
"方法学方案已保存，可先准备数据，稍后再按该方案执行": "Methodology plan saved; you may prepare data first and execute later",
|
||||
"方法学方案保存失败": "Failed to save methodology plan",
|
||||
"当前已有批量任务在执行，请等待完成后再提交方法学流程": "A batch task is currently running; please wait for completion before submitting methodology workflow",
|
||||
"请至少选择一个可执行的 bbav5 阶段": "Please select at least one executable bbav5 stage",
|
||||
"亚家族参考物种未写入当前 job 配置，已生成方法学本地计划，请在批量确认页核对参考物种": "Subfamily reference species not written to current job config; local methodology plan generated. Please verify reference species on batch confirmation page.",
|
||||
"方法学执行规划失败": "Methodology execution planning failed",
|
||||
|
||||
// Other
|
||||
"请Input内容": "Please enter content",
|
||||
"请先选择或创建 Working Directory": "Please select or create a Working Directory first",
|
||||
"规划请求失败": "Plan request failed",
|
||||
"重新绘图功能开发中...": "Replot feature is under development...",
|
||||
|
||||
// ===== tp() keys — 使用完整中文模板作为 key =====
|
||||
"确定删除会话「{title}」吗？该操作会从列表中移除，但保留后台记录。": "Delete session \"{title}\"? This removes it from the list but keeps backend records.",
|
||||
"切换到: {title}": "Switched to: {title}",
|
||||
"预览 {rows} 行：{fields}。确认无误后点击 Apply。": "Preview {rows} rows: {fields}. Click Apply once confirmed.",
|
||||
"已应用 {rows} 行修改。": "Applied {rows} row modifications.",
|
||||
"已取消预览，表格已恢复到预览前。": "Preview cancelled, table restored.",
|
||||
"链特异性为必填：还有 {count} 个样本未填写（{examples}）": "Library strandness required: {count} sample(s) unfilled ({examples})",
|
||||
"设计提示：{error}；将保留原流程的兼容处理。": "Design tip: {error}; keeping original compatible handling.",
|
||||
"已加载 {count} files": "Loaded {count} files",
|
||||
"加载图谱失败: {message}": "Graph load failed: {message}",
|
||||
"找到节点: {name}": "Node found: {name}",
|
||||
"读取表格失败: {reason}": "Table read failed: {reason}",
|
||||
"PPI Reset 已完成: {reset_id}": "PPI Reset complete: {reset_id}",
|
||||
"STRING 链接文件内容：{preview}": "STRING link file content: {preview}",
|
||||
"读取文件失败: {message}": "File read failed: {message}",
|
||||
"已创建新Working Directory: {job_id}": "New Working Directory created: {job_id}",
|
||||
"创建失败: {message}": "Creation failed: {message}",
|
||||
"获取Working Directory列表失败: {message}": "Failed to get Working Directory list: {message}",
|
||||
"已切换到Working Directory: {job_id}": "Switched to Working Directory: {job_id}",
|
||||
"切换失败: {message}": "Switch failed: {message}",
|
||||
"进化树图重绘失败：{message}": "Phylogeny tree replot failed: {message}",
|
||||
"Combo 图修订失败：{message}": "Combo plot revision failed: {message}",
|
||||
"任务: {message}\n状态: {status}\n进度: {progress}%": "Task: {message}\nStatus: {status}\nProgress: {progress}%",
|
||||
"停止拓展分析失败：{message}": "Failed to stop extension: {message}",
|
||||
"已选择 {count} 个原始代码文件": "{count} code file(s) selected",
|
||||
"已选择 {count} 个测试数据文件": "{count} test data file(s) selected",
|
||||
"已拖入 {count} 个文件，已自动填充拓展包": "{count} file(s) dropped; extension package auto-filled",
|
||||
"❌ {message}": "❌ {message}",
|
||||
"Upload complete. Latest Excel is now used as config.xlsx.{warningText}": "Upload complete. Latest Excel is now used as config.xlsx.{warningText}",
|
||||
"{title}，需要自动注释": "{title}, Auto-annotation Required",
|
||||
|
||||
// String close species (tp with multi-line)
|
||||
"目标物种不在 STRING 固定快照中。请确认是否采用排序第一的近源物种：": "Target species not in STRING fixed snapshot. Confirm using the top-ranked close species:",
|
||||
"确认后才会下载参考 PEP、生成 Ortholog，并执行 PPI。": "Reference PEP will be downloaded, Ortholog generated, and PPI executed only after confirmation.",
|
||||
"是否切换为\"自动注释 + 继续富集\"？": "Switch to \"Auto-annotation + Continue Enrichment\"?"
|
||||
};
|
||||
|
||||
Reference in New Issue
Block a user