# packages in environment at /home/xia-lab/miniconda3/envs/rnaseq: # # Name Version Build Channel _openmp_mutex 4.5 20_gnu https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge _python_abi3_support 1.0 hd8ed1ab_2 conda-forge _r-mutex 1.0.1 anacondar_1 conda-forge aiofile 3.11.1 pypi_0 pypi alsa-lib 1.2.15.3 hb03c661_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge annotated-types 0.7.0 pyhd8ed1ab_1 conda-forge anyio 4.13.0 pypi_0 pypi argcomplete 3.6.3 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge attrs 26.1.0 pyhcf101f3_0 conda-forge authlib 1.7.2 pypi_0 pypi backports-tarfile 1.2.0 pypi_0 pypi backports.zstd 1.3.0 py311h6b1f9c4_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge beartype 0.22.9 pypi_0 pypi binutils_impl_linux-64 2.45.1 default_hfdba357_101 conda-forge bioconductor-annotationdbi 1.72.0 r45hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-annotationhub 4.0.0 r45hdfd78af_0 bioconda bioconductor-biobase 2.70.0 r45h01b2380_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-biocbaseutils 1.12.0 r45hdfd78af_0 bioconda bioconductor-biocfilecache 3.0.0 r45hdfd78af_0 bioconda bioconductor-biocgenerics 0.56.0 r45hdfd78af_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-biocparallel 1.44.0 r45ha27e39d_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-biocversion 3.22.0 r45hdfd78af_0 bioconda bioconductor-biostrings 2.78.0 r45h01b2380_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-clusterprofiler 4.18.4 r45hdfd78af_0 bioconda bioconductor-data-packages 20260207 hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-dose 4.4.0 r45hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-edger 4.8.2 r45h01b2380_0 bioconda bioconductor-enrichplot 1.30.4 r45hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-fgsea 1.36.2 r45ha27e39d_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-ggmsa 1.16.0 r45hdfd78af_0 bioconda bioconductor-ggtree 4.0.4 r45hdfd78af_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-go.db 3.22.0 r45hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-gosemsim 2.36.0 r45ha27e39d_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-graph 1.88.1 r45h01b2380_0 bioconda bioconductor-impute 1.84.0 r45h63f16b7_0 bioconda bioconductor-iranges 2.44.0 r45h01b2380_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-kegggraph 1.70.0 r45hdfd78af_0 bioconda bioconductor-keggrest 1.50.0 r45hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-limma 3.66.0 r45h01b2380_0 bioconda bioconductor-org.at.tair.db 3.22.0 r45hdfd78af_0 bioconda bioconductor-org.hs.eg.db 3.22.0 r45hdfd78af_0 bioconda bioconductor-pathview 1.50.0 r45hdfd78af_0 bioconda bioconductor-preprocesscore 1.72.0 r45h01b2380_0 bioconda bioconductor-qvalue 2.42.0 r45hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-r4rna 1.38.0 r45hdfd78af_0 bioconda bioconductor-rgraphviz 2.54.0 r45h68012da_1 bioconda bioconductor-s4vectors 0.48.0 r45h01b2380_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-seqinfo 1.0.0 r45hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-treeio 1.34.0 r45hdfd78af_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda bioconductor-tximport 1.38.2 r45hdfd78af_0 bioconda bioconductor-xvector 0.50.0 r45h01b2380_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda biomart 0.9.2 pyhe01879c_0 conda-forge boost-cpp 1.85.0 h3c6214e_4 conda-forge brotli 1.2.0 hed03a55_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge brotli-bin 1.2.0 hb03c661_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge brotli-python 1.2.0 py311h66f275b_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge bwidget 1.10.1 ha770c72_1 conda-forge bzip2 1.0.8 hda65f42_9 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge c-ares 1.34.6 hb03c661_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge ca-certificates 2026.5.20 hbd8a1cb_0 conda-forge cachetools 7.1.4 pypi_0 pypi caio 0.9.25 pypi_0 pypi cairo 1.18.4 h3394656_0 conda-forge certifi 2026.5.20 pyhd8ed1ab_0 conda-forge cffi 2.0.0 py311h03d9500_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge charset-normalizer 3.4.6 pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge click 8.4.1 pypi_0 pypi coloredlogs 15.0.1 pyhd8ed1ab_4 conda-forge colormath 3.0.0 pyhd8ed1ab_4 conda-forge contourpy 1.3.3 py311h724c32c_4 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge cpython 3.11.15 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font-ttf-source-code-pro 2.038 h77eed37_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge font-ttf-ubuntu 0.83 h77eed37_3 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge fontconfig 2.17.1 h27c8c51_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge fonts-conda-ecosystem 1 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge fonts-conda-forge 1 hc364b38_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge fonttools 4.62.0 py311h3778330_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge freetype 2.14.2 ha770c72_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge fribidi 1.0.16 hb03c661_0 conda-forge gcc_impl_linux-64 15.2.0 he420e7e_18 conda-forge gffread 0.12.7 h077b44d_6 bioconda gfortran_impl_linux-64 15.2.0 h281d09f_18 conda-forge giflib 5.2.2 hd590300_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge glpk 5.0 h445213a_0 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pyhd8ed1ab_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge importlib-metadata 9.0.0 pypi_0 pypi isa-l 2.31.1 hb9d3cd8_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge jaraco-classes 3.4.0 pypi_0 pypi jaraco-context 6.1.2 pypi_0 pypi jaraco-functools 4.5.0 pypi_0 pypi jeepney 0.9.0 pypi_0 pypi jinja2 3.1.6 pyhcf101f3_1 conda-forge joserfc 1.6.7 pypi_0 pypi jq 1.5 0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda jsonref 1.1.0 pypi_0 pypi jsonschema 4.26.0 pyhcf101f3_0 conda-forge jsonschema-path 0.5.0 pypi_0 pypi jsonschema-specifications 2025.9.1 pyhcf101f3_0 conda-forge kaleido-core 0.2.1 h3644ca4_0 conda-forge kallisto 0.51.1 ha4fb952_1 bioconda kernel-headers_linux-64 6.12.0 he073ed8_6 conda-forge keyring 25.7.0 pypi_0 pypi keyutils 1.6.3 hb9d3cd8_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge kiwisolver 1.5.0 py311h724c32c_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge krb5 1.21.3 h659f571_0 conda-forge lcms2 2.18 h0c24ade_0 conda-forge ld_impl_linux-64 2.45.1 default_hbd61a6d_101 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge lerc 4.1.0 hdb68285_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libaec 1.1.5 h088129d_0 conda-forge libblas 3.11.0 5_h4a7cf45_openblas conda-forge libboost 1.85.0 h0ccab89_4 conda-forge libboost-devel 1.85.0 h00ab1b0_4 conda-forge libboost-headers 1.85.0 ha770c72_4 conda-forge libbrotlicommon 1.2.0 hb03c661_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libbrotlidec 1.2.0 hb03c661_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libbrotlienc 1.2.0 hb03c661_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libcblas 3.11.0 5_h0358290_openblas conda-forge libclang-cpp21.1 21.1.8 default_h99862b1_4 conda-forge libclang-cpp22.1 22.1.0 default_h99862b1_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libclang13 22.1.0 default_h746c552_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libcups 2.3.3 hb8b1518_5 conda-forge libcurl 8.18.0 h4e3cde8_0 conda-forge libdeflate 1.25 h17f619e_0 conda-forge libdrm 2.4.125 hb03c661_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libedit 3.1.20250104 pl5321h7949ede_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libegl 1.7.0 ha4b6fd6_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libev 4.33 hd590300_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libexpat 2.7.4 hecca717_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libffi 3.5.2 h3435931_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libfreetype 2.14.2 ha770c72_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libfreetype6 2.14.2 h73754d4_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libgcc 15.2.0 he0feb66_18 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libgcc-devel_linux-64 15.2.0 hcc6f6b0_118 conda-forge libgcc-ng 15.2.0 h69a702a_18 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libgfortran 15.2.0 h69a702a_18 conda-forge libgfortran-ng 15.2.0 h69a702a_18 conda-forge libgfortran5 15.2.0 h68bc16d_18 conda-forge libgl 1.7.0 ha4b6fd6_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libglib 2.86.4 h6548e54_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libglvnd 1.7.0 ha4b6fd6_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libglx 1.7.0 ha4b6fd6_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libgomp 15.2.0 he0feb66_18 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libhwloc 2.13.0 default_he001693_1000 conda-forge libiconv 1.18 h3b78370_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libjpeg-turbo 3.1.2 hb03c661_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge liblapack 3.11.0 5_h47877c9_openblas 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https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libxml2 2.15.1 h26afc86_0 conda-forge libxml2-16 2.15.1 ha9997c6_0 conda-forge libxml2-devel 2.15.1 h26afc86_0 conda-forge libxslt 1.1.43 h711ed8c_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge libzlib 1.3.1 hb9d3cd8_2 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge make 4.4.1 hb9d3cd8_2 conda-forge markdown 3.10.2 pyhcf101f3_0 conda-forge markdown-it-py 4.2.0 pyhd8ed1ab_0 conda-forge markupsafe 3.0.3 py311h3778330_1 conda-forge mathjax 2.7.7 ha770c72_3 conda-forge matplotlib 3.10.8 py311h38be061_0 conda-forge matplotlib-base 3.10.8 py311h0f3be63_0 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge mcp 1.27.1 pypi_0 pypi mdurl 0.1.2 pyhd8ed1ab_1 conda-forge mimalloc 3.2.8 h54a6638_0 conda-forge more-itertools 11.1.0 pypi_0 pypi multiqc 1.35 pyhdfd78af_1 bioconda munkres 1.0.7 py_1 https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda narwhals 2.21.2 pyhcf101f3_0 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