# Structure Skill Configuration

skill:
  name: structure
  version: "1.0.0"
  description: "基因结构分析 - 外显子/内含子"
  author: "bbav2-team"

input:
  gff3: null      # 基因组GFF3注释文件
  gene_list: null # 基因ID列表文件

parameters:
  min_exon_length: 1
  plot_height: 6
  plot_width: 12
  intron_scale: true

output:
  format: ["png", "pdf", "gff"]
  report_template: "templates/report.md.j2"
  include_reproducibility: true

dependencies:
  conda:
    channels:
      - bioconda
      - conda-forge
    packages:
      - biopython=1.81
      - pandas=2.0.0
      - matplotlib=3.7.0
      - seaborn=0.12.0