from pymol.cgo import * from pymol import cmd import math # this is an example of creating a cgo object consisting of multiple # states which form a movie for a in range(1,62): # create a state with some unique geometry obj = [ BEGIN, LINES, COLOR, 1.0, 1.0, 1.0, VERTEX, 0.0, 0.0, 0.0, VERTEX, 1.0, 0.0, 0.0, VERTEX, 0.0, 0.0, 0.0, VERTEX, 0.0, 2.0, 0.0, VERTEX, 0.0, 0.0, 0.0, VERTEX, 00, 0.0, 3.0, END, BEGIN, TRIANGLES, COLOR, 1.0, 0.2, 0.2, VERTEX, 0.0, 0.0, 0.0, VERTEX, math.cos((a-1)/10.0), math.sin((a-1)/10.0), 2.0, VERTEX, 0.0, 0.0, 2.0, END ] # load state into PyMOL cmd.load_cgo(obj,'cgo02',a) # this moves the rear clipping plane back a bit cmd.clip('far',-5) # now, start the movie cmd.mplay()