PlantAI-dev/WORKLINE.md

WORKLINE

last_updated: 2026-07-02

Identity

• type: bioagent
• copy_role: PlantAI-dev 9000 profile / active bioagent development line
• canonical_path: /home/xia-lab/PlantAI-dev
• resolved_path_policy: use readlink -f /home/xia-lab/PlantAI-dev before path-sensitive edits because this path is a symlink into project roots.
• source_project: same family as bbav5, but current runtime profile and feature work differ from 7880.

Current Workline

Current workline: RNA-seq quant/expression evidence-chain revision plus PlantAI 9000 runtime profile.

Evidence:

• 项目记录/PlantAI-dev_9000启动说明_20260626.md
• 项目记录/rnaseqUpdate/2026-06-30_rnaseq_quant_expression_evidence_revision.md
• logs/celery_plantai_dev_9000/
• logs/plantai_dev_9000_web.log

Runtime Profile

• web_port: 9000
• celery_queue_prefix: plantai_dev_9000
• redis_db: 10
• start_scripts:
  • start_celery_port9000.sh
  • start_plantai_9000.sh
• historical_scripts:
  • start_celery_7880.sh is retained for compatibility and is not the current default.

External Dependencies

• Redis local service.
• Conda/Python environment used by PlantAI-dev startup scripts.
• Bioinformatics toolchain used by bbav5 stages and RNA-seq bridge logic.

Active Evidence

• Project startup record: 项目记录/PlantAI-dev_9000启动说明_20260626.md
• RNA-seq feature record: 项目记录/rnaseqUpdate/2026-06-30_rnaseq_quant_expression_evidence_revision.md
• Runtime logs: logs/celery_plantai_dev_9000/, logs/plantai_dev_9000_web.log

Verification Commands

Use these only after user-approved service startup:

curl -s http://127.0.0.1:9000/api/info
curl -s http://127.0.0.1:9000/api/celery/health

For read-only governance checks:

sed -n '1,140p' 项目记录/PlantAI-dev_9000启动说明_20260626.md
find logs/celery_plantai_dev_9000 -maxdepth 1 -type f

Do Not Assume Duplicate Of

• Do not treat this as a disposable copy of /home/xia-lab/wutx/00test/bbav5_0502_Yang_Tihuan.7880.
• Do not use stale .env 7880-style values as the only runtime source; prefer the 9000 startup record and 9000 scripts.
• Do not copy 7880 or 7881 changes into this workline without first listing differences and risks.

Update Policy

Update this file when the default port, queue prefix, Redis DB, startup scripts, current feature line, or active evidence record changes.