86 lines
13 KiB
Plaintext
Executable File
86 lines
13 KiB
Plaintext
Executable File
# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
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# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target
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#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------
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Ig_SPL7 PF26102.1 FtPinG0009145900.01.T01 - 5.9e-41 139.6 1.4 1.3e-40 138.5 1.4 1.6 1 0 0 1 1 1 1 SPL7-like, immunoglobulin-like domain
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SBP PF03110.20 FtPinG0009145900.01.T01 - 9.1e-30 103.3 16.2 1.9e-29 102.3 16.2 1.6 1 0 0 1 1 1 1 SBP domain
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Ank_2 PF12796.14 FtPinG0009145900.01.T01 - 0.00015 22.8 0.0 0.00067 20.7 0.0 2.1 1 1 0 1 1 1 1 Ankyrin repeats (3 copies)
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Ank_3 PF13606.13 FtPinG0009145900.01.T01 - 0.00042 21.0 0.0 3.8 8.9 0.0 3.1 2 0 0 2 2 2 2 Ankyrin repeat
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Ank PF00023.37 FtPinG0009145900.01.T01 - 0.0015 19.2 0.1 2.6 9.1 0.0 2.9 2 0 0 2 2 2 2 Ankyrin repeat
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Ank_4 PF13637.13 FtPinG0009145900.01.T01 - 0.0028 18.4 0.0 27 5.8 0.0 3.9 3 1 0 3 3 3 2 Ankyrin repeats (many copies)
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Ank_5 PF13857.13 FtPinG0009145900.01.T01 - 0.026 15.4 0.0 14 6.7 0.0 2.8 2 0 0 2 2 2 0 Ankyrin repeats (many copies)
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RYDR_ITPR PF01365.28 FtPinG0009145900.01.T01 - 0.2 11.6 0.0 0.48 10.4 0.0 1.5 1 0 0 1 1 1 0 RIH domain
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SBP PF03110.20 FtPinG0007295700.01.T01 - 8.3e-32 109.8 12.7 1.2e-31 109.3 12.7 1.2 1 0 0 1 1 1 1 SBP domain
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SBP PF03110.20 FtPinG0008190500.01.T01 - 1.5e-30 105.7 18.5 2.3e-30 105.2 18.5 1.3 1 0 0 1 1 1 1 SBP domain
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Chitin_bind_1 PF00187.25 FtPinG0008190500.01.T01 - 3.4 8.5 8.0 0.19 12.5 2.4 1.7 2 0 0 2 2 2 0 Chitin recognition protein
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SBP PF03110.20 FtPinG0000496000.01.T01 - 6.9e-32 110.1 14.3 1.2e-31 109.3 14.3 1.4 1 0 0 1 1 1 1 SBP domain
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SBP PF03110.20 FtPinG0000493400.01.T01 - 1.6e-30 105.7 15.3 1.6e-30 105.7 15.3 2.0 2 0 0 2 2 2 1 SBP domain
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SBP PF03110.20 FtPinG0001782200.01.T01 - 6e-30 103.8 14.1 1e-29 103.1 14.1 1.4 1 0 0 1 1 1 1 SBP domain
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SBP PF03110.20 FtPinG0006588500.01.T01 - 1e-31 109.5 11.0 1e-31 109.5 11.0 1.9 2 0 0 2 2 2 1 SBP domain
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Ig_SPL7 PF26102.1 FtPinG0006650700.01.T01 - 3.5e-33 114.6 0.0 6.7e-33 113.7 0.0 1.5 1 0 0 1 1 1 1 SPL7-like, immunoglobulin-like domain
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SBP PF03110.20 FtPinG0006650700.01.T01 - 1.4e-07 32.2 3.5 4.1e-07 30.7 3.5 1.8 1 0 0 1 1 1 1 SBP domain
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Ig_SPL7 PF26102.1 FtPinG0000377600.01.T01 - 9.6e-39 132.5 0.2 1.8e-38 131.6 0.2 1.5 1 0 0 1 1 1 1 SPL7-like, immunoglobulin-like domain
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SBP PF03110.20 FtPinG0000377600.01.T01 - 6.2e-30 103.8 15.3 1.2e-29 102.9 15.3 1.5 1 0 0 1 1 1 1 SBP domain
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Ank PF00023.37 FtPinG0000377600.01.T01 - 0.0012 19.6 1.2 2 9.4 0.0 3.0 3 0 0 3 3 3 2 Ankyrin repeat
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Ank_2 PF12796.14 FtPinG0000377600.01.T01 - 0.003 18.6 0.0 0.02 16.0 0.0 2.2 1 1 0 1 1 1 1 Ankyrin repeats (3 copies)
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Ank_3 PF13606.13 FtPinG0000377600.01.T01 - 0.01 16.8 0.0 12 7.3 0.0 2.9 2 0 0 2 2 2 0 Ankyrin repeat
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Ank_5 PF13857.13 FtPinG0000377600.01.T01 - 0.05 14.5 0.0 24 6.0 0.0 2.8 2 0 0 2 2 2 0 Ankyrin repeats (many copies)
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Ank_4 PF13637.13 FtPinG0000377600.01.T01 - 0.24 12.3 0.1 59 4.7 0.0 3.0 3 0 0 3 3 3 0 Ankyrin repeats (many copies)
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BNIP3 PF06553.18 FtPinG0000377600.01.T01 - 2.6 8.2 4.9 0.56 10.3 0.2 2.1 2 0 0 2 2 2 0 BNIP3
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Ig_SPL7 PF26102.1 FtPinG0005349100.01.T01 - 9.3e-38 129.3 0.1 1.8e-37 128.4 0.1 1.5 1 0 0 1 1 1 1 SPL7-like, immunoglobulin-like domain
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SBP PF03110.20 FtPinG0005349100.01.T01 - 2.1e-31 108.5 12.7 4.4e-31 107.5 12.7 1.6 1 0 0 1 1 1 1 SBP domain
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Ank_2 PF12796.14 FtPinG0005349100.01.T01 - 1.8e-07 32.1 0.0 0.00067 20.7 0.0 2.0 1 1 1 2 2 2 2 Ankyrin repeats (3 copies)
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Ank PF00023.37 FtPinG0005349100.01.T01 - 0.00015 22.4 0.4 0.14 13.1 0.0 2.9 2 0 0 2 2 2 2 Ankyrin repeat
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Ank_3 PF13606.13 FtPinG0005349100.01.T01 - 0.0012 19.6 0.1 7.7 8.0 0.2 3.2 2 0 0 2 2 2 2 Ankyrin repeat
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Ank_5 PF13857.13 FtPinG0005349100.01.T01 - 0.19 12.7 0.5 27 5.8 0.0 3.1 3 0 0 3 3 3 0 Ankyrin repeats (many copies)
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Ig_SPL7 PF26102.1 FtPinG0007448200.01.T01 - 7.1e-40 136.1 0.1 1.4e-39 135.2 0.1 1.5 1 0 0 1 1 1 1 SPL7-like, immunoglobulin-like domain
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SBP PF03110.20 FtPinG0007448200.01.T01 - 2.5e-30 105.1 13.7 6e-30 103.9 13.7 1.7 1 0 0 1 1 1 1 SBP domain
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Ank_2 PF12796.14 FtPinG0007448200.01.T01 - 7.7e-05 23.7 0.0 0.013 16.5 0.0 2.3 1 1 1 2 2 2 2 Ankyrin repeats (3 copies)
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Ank_3 PF13606.13 FtPinG0007448200.01.T01 - 0.0002 22.0 0.2 2.8 9.3 0.0 4.4 4 0 0 4 4 4 1 Ankyrin repeat
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Ank PF00023.37 FtPinG0007448200.01.T01 - 0.0065 17.2 0.0 0.44 11.5 0.0 3.3 2 0 0 2 2 2 1 Ankyrin repeat
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MRNIP PF15749.11 FtPinG0007448200.01.T01 - 0.12 13.6 1.6 0.45 11.8 1.6 1.9 1 0 0 1 1 1 0 MRN-interacting protein
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zf-BED PF02892.22 FtPinG0007448200.01.T01 - 0.14 12.7 0.4 0.36 11.4 0.4 1.7 1 0 0 1 1 1 0 BED zinc finger
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SBP PF03110.20 FtPinG0003310800.01.T01 - 8.2e-33 113.0 13.4 1.1e-32 112.6 13.4 1.2 1 0 0 1 1 1 1 SBP domain
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HSD_C PF22101.2 FtPinG0003310800.01.T01 - 0.041 14.4 0.0 0.1 13.1 0.0 1.7 1 1 1 2 2 2 0 Homoserine dehydrogenase C-terminal domain
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RAMP PF04901.19 FtPinG0003310800.01.T01 - 0.07 13.6 1.2 0.094 13.2 1.2 1.2 1 0 0 1 1 1 0 Receptor activity modifying family
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SBP PF03110.20 FtPinG0000212200.01.T01 - 3.5e-31 107.8 12.4 5.8e-31 107.1 12.4 1.4 1 0 0 1 1 1 1 SBP domain
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SBP PF03110.20 FtPinG0000286400.01.T01 - 2.7e-32 111.4 14.5 3.9e-32 110.9 14.5 1.2 1 0 0 1 1 1 1 SBP domain
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Rrn6_K-rich PF20639.3 FtPinG0000286400.01.T01 - 1.8 9.9 7.6 0.14 13.5 3.2 1.5 2 0 0 2 2 2 0 RRN6, K-rich C-terminal domain
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SBP PF03110.20 FtPinG0001287900.01.T01 - 1.2e-32 112.5 14.2 1.7e-32 112.0 14.2 1.2 1 0 0 1 1 1 1 SBP domain
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DUF4487 PF14868.12 FtPinG0001287900.01.T01 - 0.12 11.4 0.5 0.16 11.1 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4487)
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SBP PF03110.20 FtPinG0002293500.01.T01 - 4.2e-34 117.2 14.2 5.1e-34 116.9 14.2 1.1 1 0 0 1 1 1 1 SBP domain
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DUF4487 PF14868.12 FtPinG0002293500.01.T01 - 0.059 12.5 0.7 0.071 12.2 0.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4487)
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Per1 PF04080.20 FtPinG0002293500.01.T01 - 0.15 12.2 0.2 0.16 12.1 0.2 1.0 1 0 0 1 1 1 0 Per1-like family
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SBP PF03110.20 FtPinG0001874600.01.T01 - 2.1e-12 47.6 3.1 3e-12 47.2 3.1 1.2 1 0 0 1 1 1 1 SBP domain
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Tachystatin_B PF11478.13 FtPinG0001874600.01.T01 - 0.12 12.9 1.0 0.19 12.2 1.0 1.3 1 0 0 1 1 1 0 Antimicrobial chitin binding protein tachystatin B
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Ig_SPL7 PF26102.1 FtPinG0003446200.01.T01 - 3.8e-37 127.3 1.2 1e-36 126.0 1.2 1.8 1 0 0 1 1 1 1 SPL7-like, immunoglobulin-like domain
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SBP PF03110.20 FtPinG0003446200.01.T01 - 1.1e-28 99.8 15.1 2.5e-28 98.7 15.1 1.6 1 0 0 1 1 1 1 SBP domain
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Zn_ribbon_NUD PF09297.17 FtPinG0003446200.01.T01 - 0.013 15.7 3.1 0.013 15.7 3.1 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain
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DZR_2 PF18912.7 FtPinG0003446200.01.T01 - 2.4 8.6 5.3 1.5 9.2 2.2 2.3 2 0 0 2 2 2 0 Double zinc ribbon domain
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SBP PF03110.20 FtPinG0006144300.01.T01 - 4.4e-33 113.9 14.4 5.2e-33 113.7 14.4 1.1 1 0 0 1 1 1 1 SBP domain
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CNH PF00780.29 FtPinG0006144300.01.T01 - 0.045 14.1 0.0 0.045 14.1 0.0 1.1 1 0 0 1 1 1 0 CNH domain
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Per1 PF04080.20 FtPinG0006144300.01.T01 - 0.12 12.6 0.3 0.12 12.5 0.3 1.0 1 0 0 1 1 1 0 Per1-like family
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SBP PF03110.20 FtPinG0006382900.01.T01 - 1.8e-32 111.9 11.0 2.9e-32 111.3 11.0 1.3 1 0 0 1 1 1 1 SBP domain
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Mob_synth_C PF06463.19 FtPinG0006382900.01.T01 - 0.043 14.3 0.5 0.078 13.4 0.5 1.4 1 0 0 1 1 1 0 Molybdenum Cofactor Synthesis C
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SBP PF03110.20 FtPinG0006337300.01.T01 - 3.3e-33 114.3 15.2 4e-33 114.0 15.2 1.1 1 0 0 1 1 1 1 SBP domain
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CNH PF00780.29 FtPinG0006337300.01.T01 - 0.0097 16.2 0.0 0.0098 16.2 0.0 1.1 1 0 0 1 1 1 1 CNH domain
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DUF4487 PF14868.12 FtPinG0006337300.01.T01 - 0.025 13.7 1.3 0.03 13.4 1.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4487)
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Ig_SPL7 PF26102.1 FtPinG0007464600.01.T01 - 3.3e-38 130.8 0.2 7.2e-38 129.7 0.2 1.6 1 0 0 1 1 1 1 SPL7-like, immunoglobulin-like domain
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SBP PF03110.20 FtPinG0007464600.01.T01 - 2.8e-31 108.1 14.5 5.7e-31 107.1 14.5 1.6 1 0 0 1 1 1 1 SBP domain
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Ank_2 PF12796.14 FtPinG0007464600.01.T01 - 0.003 18.6 0.0 0.011 16.7 0.0 2.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies)
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Ank PF00023.37 FtPinG0007464600.01.T01 - 0.0041 17.9 0.1 2 9.4 0.0 2.9 2 0 0 2 2 2 2 Ankyrin repeat
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Ank_3 PF13606.13 FtPinG0007464600.01.T01 - 0.016 16.2 0.1 23 6.5 0.0 3.5 4 0 0 4 4 4 0 Ankyrin repeat
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SBP PF03110.20 FtPinG0005035600.01.T01 - 3.3e-31 107.9 15.6 4.6e-31 107.4 15.6 1.2 1 0 0 1 1 1 1 SBP domain
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AFF4_CHD PF18876.7 FtPinG0005035600.01.T01 - 4.6 7.1 7.0 6.2 6.7 7.0 1.2 1 0 0 1 1 1 0 AFF4, C-terminal homology domain
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SBP PF03110.20 FtPinG0009904300.01.T01 - 3.2e-18 66.3 7.3 5.1e-18 65.6 7.3 1.3 1 0 0 1 1 1 1 SBP domain
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Ribosomal_L32p PF01783.30 FtPinG0009904300.01.T01 - 8.5 7.1 9.2 2.2 9.0 3.8 2.4 2 1 0 2 2 2 0 Ribosomal L32p protein family
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#
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# Program: hmmscan
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# Version: 3.4 (Aug 2023)
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# Pipeline mode: SCAN
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# Query file: ../../../61.SPL_identification/03.gene_stat/Ft.SPL.pep.fasta
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# Target file: Pfam-A.hmm
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# Option settings: hmmscan -o results.out --tblout results.tblout --domtblout results.domtblout --cpu 8 Pfam-A.hmm ../../../61.SPL_identification/03.gene_stat/Ft.SPL.pep.fasta
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# Current dir: /home/userlab/home/wutx/00.work/01.gene_family/geneFamily20200803/63.SPL_structure_motif/02.gene_structure/tree_motif_domain_structure.R
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# Date: Tue Jan 6 06:40:24 2026
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# [ok]
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