43 lines
1.3 KiB
Plaintext
Executable File
43 lines
1.3 KiB
Plaintext
Executable File
# Genetic Code Table
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#
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# Obtained from: http://www3.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi
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#
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# Version 3.1 - 1995
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# Initial base data set from Andrzej Elzanowski (PIR/NCBI)
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# Addition of Alternative Yeast by J.Ostell at NCBI
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#
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# Differences from the Standard Code:
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#
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# Code 12 Standard
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#
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# CUG Ser Leu
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#
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#
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# Alternative Initiation Codons:
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#
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# CAG may be used in Candida albicans (Santos et al., 1993).
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#
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# Systematic Range:
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#
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# Endomycetales (yeasts): Candida albicans, Candida cylindracea, Candida
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# melibiosica, Candida parapsilosis, and Candida rugosa (Ohama et al.,
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# 1993).
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#
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# Comment:
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#
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# However, other yeast, including Saccharomyces cerevisiae, Candida azyma,
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# Candida diversa, Candida magnoliae, Candida rugopelliculosa, Yarrowia
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# lipolytica, and Zygoascus hellenicus, definitely use the standard
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# (nuclear) code (Ohama et al., 1993).
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Genetic Code [12]
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Alternative Yeast Nuclear
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AAs = FFLLSSSSYY**CC*WLLLSPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG
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Starts = -------------------M---------------M----------------------------
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Base1 = TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
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Base2 = TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
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Base3 = TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
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