45 lines
1.4 KiB
Plaintext
Executable File
45 lines
1.4 KiB
Plaintext
Executable File
# Genetic Code Table
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#
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# Obtained from: http://www3.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi
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#
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# Version 3.1 - 1995
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# Initial base data set from Andrzej Elzanowski (PIR/NCBI)
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#
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# Differences from the Standard Code:
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#
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# Code 6 Standard
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#
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# UAA Gln Q Ter *
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# UAG Gln Q Ter *
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#
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#
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# Systematic Range:
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#
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# Ciliata: Oxytricha and Stylonychia (Hoffman et al. 1995), Paramecium,
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# Tetrahymena, Oxytrichidae and probably Glaucoma chattoni.
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#
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# Dasycladaceae: Acetabularia (Schneider et al., 1989) and Batophora
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# (Schneider and de Groot, 1991).
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#
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# Diplomonadida:
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# Scope: Hexamita inflata, Diplomonadida ATCC50330, and ATCC50380.
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# Ref.: Keeling, P.J. and Doolittle, W.F. 1996. A non-canonical genetic
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# code in an early diverging eukaryotic lineage. The EMBO Journal 15,
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# 2285-2290.
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#
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# Comment:
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#
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# The ciliate macronuclear code has not been determined completely. The
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# codon UAA is known to code for Gln only in the Oxytrichidae.
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Genetic Code [6]
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Ciliate, Dasycladacean and Hexamita Nuclear
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AAs = FFLLSSSSYYQQCC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG
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Starts = -----------------------------------M----------------------------
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Base1 = TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
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Base2 = TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
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Base3 = TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
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