1337 lines
82 KiB
XML
1337 lines
82 KiB
XML
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
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<protein-matches xmlns="https://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/schemas" interproscan-version="5.31-70.0">
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<protein>
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<sequence md5="88d47cc807fe8e977130b0cc93e0bd61">MSKIGKSIRLERIIDRKTRKTVIVPMDHGLTVGPIPGLIDLAAAVDKVAEGGANAVLGHMGLPLYGHRGYGKDVGLIIHLSASTSLGPDANHKVLVTRVEDAIRVGADGVSIHVNVGAEDEAEMLRDLGMVARRCDLWGMPLLAMMYPRGAKVRSEHSVEYVKHAARVGAELGVDIVKTNYTGSPETFREVVRGCPAPVVIAGGPKMDTEADLLQMVYDAMQAGAAGISIGRNIFQAENPTLLTRKLSKIVHEGYTPEEAARLKL</sequence>
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<xref id="A0B6J9" name="A0B6J9"/>
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<matches>
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<hmmer2-match evalue="4.3E-64" score="228.9">
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<signature ac="SM01133" name="DeoC_2">
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<entry ac="IPR002915" desc="DeoC/FbaB/ lacD aldolase" name="DeoC/FbaB/lacD_aldolase" type="FAMILY">
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<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0016829" name="lyase activity"/>
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<pathway-xref db="Reactome" id="R-HSA-71336" name="Pentose phosphate pathway (hexose monophosphate shunt)"/>
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<pathway-xref db="Reactome" id="R-HSA-6798695" name="Neutrophil degranulation"/>
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</entry>
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<signature-library-release library="SMART" version="7.1"/>
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</signature>
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<model-ac>SM01133</model-ac>
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<locations>
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<hmmer2-location score="228.9" evalue="4.3E-64" hmm-start="1" hmm-end="291" hmm-length="291" hmm-bounds="COMPLETE" start="21" end="237">
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<location-fragments>
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<hmmer2-location-fragment start="21" end="237" dc-status="CONTINUOUS"/>
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</location-fragments>
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</hmmer2-location>
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</locations>
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</hmmer2-match>
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<hmmer3-match evalue="5.5E-95" score="319.4">
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<signature ac="G3DSA:3.20.20.70">
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<entry ac="IPR013785" desc="Aldolase-type TIM barrel" name="Aldolase_TIM" type="HOMOLOGOUS_SUPERFAMILY">
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<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003824" name="catalytic activity"/>
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</entry>
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<signature-library-release library="GENE3D" version="4.2.0"/>
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</signature>
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<model-ac>2qjgA00</model-ac>
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<locations>
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<hmmer3-location env-end="264" env-start="1" post-processed="true" score="319.2" evalue="6.4E-95" hmm-start="8" hmm-end="268" hmm-length="273" hmm-bounds="COMPLETE" start="1" end="264">
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<location-fragments/>
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</hmmer3-location>
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</locations>
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</hmmer3-match>
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<hmmer3-match evalue="2.1E-59" score="200.9">
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<signature ac="PF01791" desc="DeoC/LacD family aldolase" name="DeoC">
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<entry ac="IPR002915" desc="DeoC/FbaB/ lacD aldolase" name="DeoC/FbaB/lacD_aldolase" type="FAMILY">
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<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0016829" name="lyase activity"/>
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<pathway-xref db="Reactome" id="R-HSA-71336" name="Pentose phosphate pathway (hexose monophosphate shunt)"/>
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<pathway-xref db="Reactome" id="R-HSA-6798695" name="Neutrophil degranulation"/>
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</entry>
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<signature-library-release library="PFAM" version="31.0"/>
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</signature>
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<model-ac>PF01791</model-ac>
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<locations>
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<hmmer3-location env-end="237" env-start="21" post-processed="true" score="200.7" evalue="2.4E-59" hmm-start="1" hmm-end="234" hmm-length="235" hmm-bounds="N_TERMINAL_COMPLETE" start="21" end="236">
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<location-fragments/>
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</hmmer3-location>
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</locations>
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</hmmer3-match>
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<hmmer3-match evalue="8.1E-91" score="302.7">
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<signature ac="PIRSF038992" name="Aldolase_Ia">
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<entry ac="IPR002915" desc="DeoC/FbaB/ lacD aldolase" name="DeoC/FbaB/lacD_aldolase" type="FAMILY">
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<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0016829" name="lyase activity"/>
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<pathway-xref db="Reactome" id="R-HSA-71336" name="Pentose phosphate pathway (hexose monophosphate shunt)"/>
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<pathway-xref db="Reactome" id="R-HSA-6798695" name="Neutrophil degranulation"/>
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</entry>
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<signature-library-release library="PIRSF" version="3.02"/>
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</signature>
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<model-ac>PIRSF038992</model-ac>
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<locations>
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<hmmer3-location env-end="265" env-start="1" post-processed="false" score="302.6" evalue="8.9E-91" hmm-start="2" hmm-end="262" hmm-length="271" hmm-bounds="COMPLETE" start="1" end="265">
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<location-fragments/>
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</hmmer3-location>
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</locations>
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</hmmer3-match>
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<hmmer3-match evalue="1.3E-111" score="370.3">
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<signature ac="TIGR01949" desc="AroFGH_arch: predicted phospho-2-dehydro-3-deoxyheptonate aldolase" name="TIGR01949">
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<entry ac="IPR010210" desc="2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase" name="ADH_synthase" type="FAMILY">
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<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0009073" name="aromatic amino acid family biosynthetic process"/>
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<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0016836" name="hydro-lyase activity"/>
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<pathway-xref db="MetaCyc" id="PWY-6160" name="3-dehydroquinate biosynthesis II (archaea)"/>
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<pathway-xref db="KEGG" id="00400+2.2.1.10" name="Phenylalanine, tyrosine and tryptophan biosynthesis"/>
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</entry>
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<signature-library-release library="TIGRFAM" version="15.0"/>
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</signature>
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<model-ac>TIGR01949</model-ac>
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<locations>
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<hmmer3-location env-end="262" env-start="4" post-processed="false" score="370.1" evalue="1.5E-111" hmm-start="1" hmm-end="253" hmm-length="255" hmm-bounds="N_TERMINAL_COMPLETE" start="4" end="260">
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<location-fragments/>
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</hmmer3-location>
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</locations>
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</hmmer3-match>
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<panther-match evalue="1.2E-22" familyName="Not available" score="82.6">
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<signature ac="PTHR11627" name="FRUCTOSE-BISPHOSPHATE ALDOLASE">
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<signature-library-release library="PANTHER" version="12.0"/>
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</signature>
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<model-ac>PTHR11627</model-ac>
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<locations>
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<panther-location env-start="2" env-end="265" hmm-start="38" hmm-end="342" hmm-length="357" hmm-bounds="COMPLETE" start="9" end="261">
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<location-fragments>
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<panther-location-fragment start="9" end="261" dc-status="CONTINUOUS"/>
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</location-fragments>
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</panther-location>
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</locations>
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</panther-match>
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<panther-match evalue="1.2E-22" familyName="Not available" score="82.6">
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<signature ac="PTHR11627:SF20" name="FRUCTOSE-BISPHOSPHATE ALDOLASE">
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<signature-library-release library="PANTHER" version="12.0"/>
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</signature>
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<model-ac>PTHR11627:SF20</model-ac>
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<locations>
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<panther-location env-start="2" env-end="265" hmm-start="38" hmm-end="342" hmm-length="357" hmm-bounds="COMPLETE" start="9" end="261">
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<location-fragments>
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<panther-location-fragment start="9" end="261" dc-status="CONTINUOUS"/>
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</location-fragments>
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</panther-location>
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</locations>
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</panther-match>
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<profilescan-match>
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<signature ac="MF_00960" desc="2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [aroA']." name="ADH_synthase">
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<entry ac="IPR010210" desc="2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase" name="ADH_synthase" type="FAMILY">
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<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0009073" name="aromatic amino acid family biosynthetic process"/>
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<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0016836" name="hydro-lyase activity"/>
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<pathway-xref db="MetaCyc" id="PWY-6160" name="3-dehydroquinate biosynthesis II (archaea)"/>
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<pathway-xref db="KEGG" id="00400+2.2.1.10" name="Phenylalanine, tyrosine and tryptophan biosynthesis"/>
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</entry>
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<signature-library-release library="HAMAP" version="2018_03"/>
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</signature>
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<model-ac>MF_00960</model-ac>
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<locations>
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<profilescan-location score="61.29" start="3" end="265">
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<location-fragments>
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<profilescan-location-fragment start="3" end="265" dc-status="CONTINUOUS"/>
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</location-fragments>
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<alignment>Not available</alignment>
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</profilescan-location>
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</locations>
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</profilescan-match>
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<superfamilyhmmer3-match evalue="9.89E-82">
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<signature ac="SSF51569" name="Aldolase">
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<signature-library-release library="SUPERFAMILY" version="1.75"/>
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</signature>
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<model-ac>0048586</model-ac>
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<locations>
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<superfamilyhmmer3-location hmm-length="251" start="5" end="253">
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<location-fragments/>
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</superfamilyhmmer3-location>
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</locations>
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</superfamilyhmmer3-match>
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</matches>
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</protein>
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<protein>
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<sequence md5="f927b0d241297dcc9a1c5990b58bf3c4">MAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA</sequence>
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<xref id="A2YIW7" name="A2YIW7"/>
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<matches>
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<fingerprints-match evalue="2.5E-7" graphscan="III">
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<signature ac="PR00421" desc="Thioredoxin family signature" name="THIOREDOXIN">
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<signature-library-release library="PRINTS" version="42.0"/>
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</signature>
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<model-ac>PR00421</model-ac>
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<locations>
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<fingerprints-location motifNumber="1" pvalue="0.0" score="48.89" start="31" end="39">
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<location-fragments>
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<fingerprints-location-fragment start="31" end="39" dc-status="CONTINUOUS"/>
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</location-fragments>
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</fingerprints-location>
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<fingerprints-location motifNumber="2" pvalue="0.0" score="37.87" start="78" end="89">
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<location-fragments>
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<fingerprints-location-fragment start="78" end="89" dc-status="CONTINUOUS"/>
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</location-fragments>
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</fingerprints-location>
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<fingerprints-location motifNumber="3" pvalue="0.0" score="65.28" start="39" end="48">
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<location-fragments>
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<fingerprints-location-fragment start="39" end="48" dc-status="CONTINUOUS"/>
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</location-fragments>
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</fingerprints-location>
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</locations>
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</fingerprints-match>
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<hmmer3-match evalue="3.3E-39" score="135.5">
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<signature ac="G3DSA:3.40.30.10">
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<signature-library-release library="GENE3D" version="4.2.0"/>
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</signature>
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<model-ac>3d22A00</model-ac>
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<locations>
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<hmmer3-location env-end="119" env-start="1" post-processed="true" score="135.4" evalue="3.8E-39" hmm-start="22" hmm-end="130" hmm-length="139" hmm-bounds="COMPLETE" start="1" end="119">
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<location-fragments/>
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</hmmer3-location>
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</locations>
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</hmmer3-match>
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<hmmer3-match evalue="4.9E-31" score="106.7">
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<signature ac="PF00085" desc="Thioredoxin" name="Thioredoxin">
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<entry ac="IPR013766" desc="Thioredoxin domain" name="Thioredoxin_domain" type="DOMAIN">
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<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0045454" name="cell redox homeostasis"/>
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</entry>
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<signature-library-release library="PFAM" version="31.0"/>
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</signature>
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<model-ac>PF00085</model-ac>
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<locations>
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<hmmer3-location env-end="112" env-start="8" post-processed="true" score="106.4" evalue="5.7E-31" hmm-start="2" hmm-end="104" hmm-length="104" hmm-bounds="C_TERMINAL_COMPLETE" start="9" end="112">
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<location-fragments/>
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</hmmer3-location>
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</locations>
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</hmmer3-match>
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<hmmer3-match evalue="5.9E-29" score="99.1">
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<signature ac="PIRSF000077" name="Thioredoxin">
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<entry ac="IPR005746" desc="Thioredoxin" name="Thioredoxin" type="FAMILY">
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<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0045454" name="cell redox homeostasis"/>
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<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0006662" name="glycerol ether metabolic process"/>
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<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0015035" name="protein disulfide oxidoreductase activity"/>
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</entry>
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<signature-library-release library="PIRSF" version="3.02"/>
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</signature>
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<model-ac>PIRSF000077</model-ac>
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<locations>
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<hmmer3-location env-end="113" env-start="7" post-processed="false" score="98.8" evalue="7.4E-29" hmm-start="14" hmm-end="111" hmm-length="107" hmm-bounds="COMPLETE" start="7" end="113">
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<location-fragments/>
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</hmmer3-location>
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</locations>
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</hmmer3-match>
|
|
<panther-match evalue="1.7E-51" familyName="Not available" score="175.4">
|
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<signature ac="PTHR10438:SF293" name="SUBFAMILY NOT NAMED">
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<signature-library-release library="PANTHER" version="12.0"/>
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</signature>
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<model-ac>PTHR10438:SF293</model-ac>
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<locations>
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<panther-location env-start="1" env-end="118" hmm-start="2" hmm-end="113" hmm-length="117" hmm-bounds="COMPLETE" start="3" end="114">
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<location-fragments>
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<panther-location-fragment start="3" end="114" dc-status="CONTINUOUS"/>
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</location-fragments>
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</panther-location>
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</locations>
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</panther-match>
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<panther-match evalue="1.7E-51" familyName="Not available" score="175.4">
|
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<signature ac="PTHR10438" name="THIOREDOXIN">
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<entry ac="IPR005746" desc="Thioredoxin" name="Thioredoxin" type="FAMILY">
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<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0045454" name="cell redox homeostasis"/>
|
|
<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0006662" name="glycerol ether metabolic process"/>
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0015035" name="protein disulfide oxidoreductase activity"/>
|
|
</entry>
|
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<signature-library-release library="PANTHER" version="12.0"/>
|
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</signature>
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<model-ac>PTHR10438</model-ac>
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<locations>
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<panther-location env-start="1" env-end="118" hmm-start="2" hmm-end="113" hmm-length="117" hmm-bounds="COMPLETE" start="3" end="114">
|
|
<location-fragments>
|
|
<panther-location-fragment start="3" end="114" dc-status="CONTINUOUS"/>
|
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</location-fragments>
|
|
</panther-location>
|
|
</locations>
|
|
</panther-match>
|
|
<patternscan-match>
|
|
<signature ac="PS00194" desc="Thioredoxin family active site." name="THIOREDOXIN_1">
|
|
<entry ac="IPR017937" desc="Thioredoxin, conserved site" name="Thioredoxin_CS" type="CONSERVED_SITE">
|
|
<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0045454" name="cell redox homeostasis"/>
|
|
</entry>
|
|
<signature-library-release library="PROSITE_PATTERNS" version="2018_02"/>
|
|
</signature>
|
|
<model-ac>PS00194</model-ac>
|
|
<locations>
|
|
<patternscan-location level="NONE" start="32" end="50">
|
|
<location-fragments>
|
|
<patternscan-location-fragment start="32" end="50" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</patternscan-location>
|
|
</locations>
|
|
</patternscan-match>
|
|
<profilescan-match>
|
|
<signature ac="PS51352" desc="Thioredoxin domain profile." name="THIOREDOXIN_2">
|
|
<entry ac="IPR013766" desc="Thioredoxin domain" name="Thioredoxin_domain" type="DOMAIN">
|
|
<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0045454" name="cell redox homeostasis"/>
|
|
</entry>
|
|
<signature-library-release library="PROSITE_PROFILES" version="2018_02"/>
|
|
</signature>
|
|
<model-ac>PS51352</model-ac>
|
|
<locations>
|
|
<profilescan-location score="14.057" start="1" end="118">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="1" end="118" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
</locations>
|
|
</profilescan-match>
|
|
<superfamilyhmmer3-match evalue="6.53E-36">
|
|
<signature ac="SSF52833" name="Thioredoxin-like">
|
|
<entry ac="IPR036249" desc="Thioredoxin-like superfamily" name="Thioredoxin-like_sf" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="SUPERFAMILY" version="1.75"/>
|
|
</signature>
|
|
<model-ac>0053311</model-ac>
|
|
<locations>
|
|
<superfamilyhmmer3-location hmm-length="217" start="6" end="114">
|
|
<location-fragments/>
|
|
</superfamilyhmmer3-location>
|
|
</locations>
|
|
</superfamilyhmmer3-match>
|
|
</matches>
|
|
</protein>
|
|
<protein>
|
|
<sequence md5="bb3bde1de955af5b7f49a84ba2c4d4ae">MKYKRIVFKVGTSSLTNEDGSLSRSKVKDITQQLAMLHEAGHELILVSSGAIAAGFGALGFKKRPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELKVGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSMIEAAEETEDGSYFVAQEKGLRTQKQWLAFYAQSQGSIWVDKGAAEALSQYGKSLLLSGIVEAEGVFSYGDIVTVFDKESGKSLGKGRVQFGASALEDMLRSQKAKGVLIYRDDWISITPEIQLLFTEF</sequence>
|
|
<xref id="Q97R95" name="Q97R95"/>
|
|
<matches>
|
|
<fingerprints-match evalue="8.3E-49" graphscan="IIIII">
|
|
<signature ac="PR00474" desc="Glutamate 5-kinase family signature" name="GLU5KINASE">
|
|
<entry ac="IPR001057" desc="Glutamate/acetylglutamate kinase" name="Glu/AcGlu_kinase" type="FAMILY">
|
|
<pathway-xref db="Reactome" id="R-HSA-70614" name="Amino acid synthesis and interconversion (transamination)"/>
|
|
</entry>
|
|
<signature-library-release library="PRINTS" version="42.0"/>
|
|
</signature>
|
|
<model-ac>PR00474</model-ac>
|
|
<locations>
|
|
<fingerprints-location motifNumber="3" pvalue="0.0" score="63.7" start="41" end="55">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="41" end="55" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
<fingerprints-location motifNumber="1" pvalue="0.0" score="39.46" start="75" end="103">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="75" end="103" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
<fingerprints-location motifNumber="5" pvalue="0.0" score="51.32" start="208" end="228">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="208" end="228" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
<fingerprints-location motifNumber="4" pvalue="0.0" score="47.14" start="115" end="136">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="115" end="136" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
<fingerprints-location motifNumber="2" pvalue="0.0" score="60.71" start="147" end="174">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="147" end="174" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
</locations>
|
|
</fingerprints-match>
|
|
<hmmer2-match evalue="1.1E-6" score="38.2">
|
|
<signature ac="SM00359" name="pua_5">
|
|
<entry ac="IPR002478" desc="PUA domain" name="PUA" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003723" name="RNA binding"/>
|
|
</entry>
|
|
<signature-library-release library="SMART" version="7.1"/>
|
|
</signature>
|
|
<model-ac>SM00359</model-ac>
|
|
<locations>
|
|
<hmmer2-location score="38.2" evalue="1.1E-6" hmm-start="1" hmm-end="86" hmm-length="86" hmm-bounds="COMPLETE" start="276" end="347">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="276" end="347" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
</locations>
|
|
</hmmer2-match>
|
|
<hmmer3-match evalue="3.4E-134" score="446.5">
|
|
<signature ac="PIRSF000729" name="GK">
|
|
<entry ac="IPR011529" desc="Glutamate 5-kinase" name="Glu_5kinase" type="FAMILY">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0004349" name="glutamate 5-kinase activity"/>
|
|
<go-xref category="CELLULAR_COMPONENT" db="GO" id="GO:0005737" name="cytoplasm"/>
|
|
<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0006561" name="proline biosynthetic process"/>
|
|
<pathway-xref db="MetaCyc" id="PWY-6922" name="L-Ndelta-acetylornithine biosynthesis"/>
|
|
<pathway-xref db="KEGG" id="00332+2.7.2.11" name="Carbapenem biosynthesis"/>
|
|
<pathway-xref db="KEGG" id="00330+2.7.2.11" name="Arginine and proline metabolism"/>
|
|
<pathway-xref db="MetaCyc" id="PWY-3341" name="L-proline biosynthesis III"/>
|
|
</entry>
|
|
<signature-library-release library="PIRSF" version="3.02"/>
|
|
</signature>
|
|
<model-ac>PIRSF000729</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="368" env-start="1" post-processed="false" score="446.3" evalue="3.8E-134" hmm-start="2" hmm-end="365" hmm-length="374" hmm-bounds="COMPLETE" start="1" end="368">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="3.8E-16" score="58.7">
|
|
<signature ac="PF01472" desc="PUA domain" name="PUA">
|
|
<entry ac="IPR002478" desc="PUA domain" name="PUA" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003723" name="RNA binding"/>
|
|
</entry>
|
|
<signature-library-release library="PFAM" version="31.0"/>
|
|
</signature>
|
|
<model-ac>PF01472</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="349" env-start="276" post-processed="true" score="57.5" evalue="9.3E-16" hmm-start="1" hmm-end="64" hmm-length="74" hmm-bounds="N_TERMINAL_COMPLETE" start="276" end="341">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="4.6E-42" score="144.2">
|
|
<signature ac="PF00696" desc="Amino acid kinase family" name="AA_kinase">
|
|
<entry ac="IPR001048" desc="Aspartate/glutamate/uridylate kinase" name="Asp/Glu/Uridylate_kinase" type="DOMAIN">
|
|
<pathway-xref db="Reactome" id="R-HSA-70614" name="Amino acid synthesis and interconversion (transamination)"/>
|
|
</entry>
|
|
<signature-library-release library="PFAM" version="31.0"/>
|
|
</signature>
|
|
<model-ac>PF00696</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="234" env-start="4" post-processed="true" score="143.5" evalue="7.2E-42" hmm-start="1" hmm-end="241" hmm-length="241" hmm-bounds="COMPLETE" start="4" end="234">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="3.7E-22" score="80.1">
|
|
<signature ac="G3DSA:2.30.130.10">
|
|
<entry ac="IPR036974" desc="PUA domain superfamily" name="PUA_sf" type="HOMOLOGOUS_SUPERFAMILY">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003723" name="RNA binding"/>
|
|
</entry>
|
|
<signature-library-release library="GENE3D" version="4.2.0"/>
|
|
</signature>
|
|
<model-ac>2cx0A02</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="352" env-start="273" post-processed="true" score="76.7" evalue="4.3E-21" hmm-start="4" hmm-end="77" hmm-length="83" hmm-bounds="COMPLETE" start="273" end="352">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="2.2E-134" score="446.2">
|
|
<signature ac="TIGR01027" desc="proB: glutamate 5-kinase" name="TIGR01027">
|
|
<entry ac="IPR005715" desc="Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase" name="Glu_5kinase/COase_Synthase" type="FAMILY">
|
|
<go-xref category="CELLULAR_COMPONENT" db="GO" id="GO:0005737" name="cytoplasm"/>
|
|
<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0006561" name="proline biosynthetic process"/>
|
|
<pathway-xref db="MetaCyc" id="PWY-3341" name="L-proline biosynthesis III"/>
|
|
<pathway-xref db="MetaCyc" id="PWY-6922" name="L-Ndelta-acetylornithine biosynthesis"/>
|
|
<pathway-xref db="Reactome" id="R-HSA-70614" name="Amino acid synthesis and interconversion (transamination)"/>
|
|
<pathway-xref db="KEGG" id="00330+2.7.2.11" name="Arginine and proline metabolism"/>
|
|
<pathway-xref db="KEGG" id="00332+2.7.2.11" name="Carbapenem biosynthesis"/>
|
|
</entry>
|
|
<signature-library-release library="TIGRFAM" version="15.0"/>
|
|
</signature>
|
|
<model-ac>TIGR01027</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="365" env-start="4" post-processed="false" score="446.0" evalue="2.5E-134" hmm-start="1" hmm-end="359" hmm-length="363" hmm-bounds="N_TERMINAL_COMPLETE" start="4" end="361">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="1.0E-83" score="282.8">
|
|
<signature ac="G3DSA:3.40.1160.10">
|
|
<entry ac="IPR036393" desc="Acetylglutamate kinase-like superfamily" name="AceGlu_kinase-like_sf" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="GENE3D" version="4.2.0"/>
|
|
</signature>
|
|
<model-ac>4q1tB01</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="264" env-start="1" post-processed="true" score="282.5" evalue="1.3E-83" hmm-start="11" hmm-end="268" hmm-length="273" hmm-bounds="COMPLETE" start="1" end="264">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<panther-match evalue="3.8E-117" familyName="Not available" score="393.9">
|
|
<signature ac="PTHR43654:SF3" name="GLUTAMATE 5-KINASE">
|
|
<signature-library-release library="PANTHER" version="12.0"/>
|
|
</signature>
|
|
<model-ac>PTHR43654:SF3</model-ac>
|
|
<locations>
|
|
<panther-location env-start="1" env-end="357" hmm-start="10" hmm-end="349" hmm-length="377" hmm-bounds="COMPLETE" start="3" end="343">
|
|
<location-fragments>
|
|
<panther-location-fragment start="3" end="343" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</panther-location>
|
|
</locations>
|
|
</panther-match>
|
|
<panther-match evalue="3.8E-117" familyName="Not available" score="393.9">
|
|
<signature ac="PTHR43654" name="FAMILY NOT NAMED">
|
|
<signature-library-release library="PANTHER" version="12.0"/>
|
|
</signature>
|
|
<model-ac>PTHR43654</model-ac>
|
|
<locations>
|
|
<panther-location env-start="1" env-end="357" hmm-start="10" hmm-end="349" hmm-length="377" hmm-bounds="COMPLETE" start="3" end="343">
|
|
<location-fragments>
|
|
<panther-location-fragment start="3" end="343" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</panther-location>
|
|
</locations>
|
|
</panther-match>
|
|
<patternscan-match>
|
|
<signature ac="PS00902" desc="Glutamate 5-kinase signature." name="GLUTAMATE_5_KINASE">
|
|
<entry ac="IPR019797" desc="Glutamate 5-kinase, conserved site" name="Glutamate_5-kinase_CS" type="CONSERVED_SITE">
|
|
<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0006561" name="proline biosynthetic process"/>
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0004349" name="glutamate 5-kinase activity"/>
|
|
<pathway-xref db="Reactome" id="R-HSA-70614" name="Amino acid synthesis and interconversion (transamination)"/>
|
|
<pathway-xref db="MetaCyc" id="PWY-3341" name="L-proline biosynthesis III"/>
|
|
<pathway-xref db="KEGG" id="00332+2.7.2.11" name="Carbapenem biosynthesis"/>
|
|
<pathway-xref db="KEGG" id="00330+2.7.2.11" name="Arginine and proline metabolism"/>
|
|
<pathway-xref db="MetaCyc" id="PWY-6922" name="L-Ndelta-acetylornithine biosynthesis"/>
|
|
</entry>
|
|
<signature-library-release library="PROSITE_PATTERNS" version="2018_02"/>
|
|
</signature>
|
|
<model-ac>PS00902</model-ac>
|
|
<locations>
|
|
<patternscan-location level="NONE" start="206" end="223">
|
|
<location-fragments>
|
|
<patternscan-location-fragment start="206" end="223" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</patternscan-location>
|
|
</locations>
|
|
</patternscan-match>
|
|
<phobius-match>
|
|
<signature ac="CYTOPLASMIC_DOMAIN" desc="Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm." name="Cytoplasmic domain">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>CYTOPLASMIC_DOMAIN</model-ac>
|
|
<locations>
|
|
<phobius-location start="62" end="369">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="62" end="369" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="NON_CYTOPLASMIC_DOMAIN" desc="Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region." name="Non cytoplasmic domain">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>NON_CYTOPLASMIC_DOMAIN</model-ac>
|
|
<locations>
|
|
<phobius-location start="1" end="43">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="1" end="43" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="TRANSMEMBRANE" desc="Region of a membrane-bound protein predicted to be embedded in the membrane." name="Transmembrane region">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>TRANSMEMBRANE</model-ac>
|
|
<locations>
|
|
<phobius-location start="44" end="61">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="44" end="61" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<profilescan-match>
|
|
<signature ac="MF_00456" desc="Glutamate 5-kinase [proB]." name="ProB">
|
|
<entry ac="IPR005715" desc="Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase" name="Glu_5kinase/COase_Synthase" type="FAMILY">
|
|
<go-xref category="CELLULAR_COMPONENT" db="GO" id="GO:0005737" name="cytoplasm"/>
|
|
<go-xref category="BIOLOGICAL_PROCESS" db="GO" id="GO:0006561" name="proline biosynthetic process"/>
|
|
<pathway-xref db="MetaCyc" id="PWY-3341" name="L-proline biosynthesis III"/>
|
|
<pathway-xref db="MetaCyc" id="PWY-6922" name="L-Ndelta-acetylornithine biosynthesis"/>
|
|
<pathway-xref db="Reactome" id="R-HSA-70614" name="Amino acid synthesis and interconversion (transamination)"/>
|
|
<pathway-xref db="KEGG" id="00330+2.7.2.11" name="Arginine and proline metabolism"/>
|
|
<pathway-xref db="KEGG" id="00332+2.7.2.11" name="Carbapenem biosynthesis"/>
|
|
</entry>
|
|
<signature-library-release library="HAMAP" version="2018_03"/>
|
|
</signature>
|
|
<model-ac>MF_00456</model-ac>
|
|
<locations>
|
|
<profilescan-location score="35.882" start="4" end="259">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="4" end="259" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
</locations>
|
|
</profilescan-match>
|
|
<profilescan-match>
|
|
<signature ac="PS50890" desc="PUA domain profile." name="PUA">
|
|
<entry ac="IPR002478" desc="PUA domain" name="PUA" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003723" name="RNA binding"/>
|
|
</entry>
|
|
<signature-library-release library="PROSITE_PROFILES" version="2018_02"/>
|
|
</signature>
|
|
<model-ac>PS50890</model-ac>
|
|
<locations>
|
|
<profilescan-location score="15.593" start="275" end="355">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="275" end="355" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
</locations>
|
|
</profilescan-match>
|
|
<superfamilyhmmer3-match evalue="1.7E-67">
|
|
<signature ac="SSF53633" name="Carbamate kinase-like">
|
|
<entry ac="IPR036393" desc="Acetylglutamate kinase-like superfamily" name="AceGlu_kinase-like_sf" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="SUPERFAMILY" version="1.75"/>
|
|
</signature>
|
|
<model-ac>0051788</model-ac>
|
|
<locations>
|
|
<superfamilyhmmer3-location hmm-length="250" start="4" end="255">
|
|
<location-fragments/>
|
|
</superfamilyhmmer3-location>
|
|
</locations>
|
|
</superfamilyhmmer3-match>
|
|
<superfamilyhmmer3-match evalue="9.39E-14">
|
|
<signature ac="SSF88697" name="PUA domain-like">
|
|
<entry ac="IPR015947" desc="PUA-like superfamily" name="PUA-like_sf" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="SUPERFAMILY" version="1.75"/>
|
|
</signature>
|
|
<model-ac>0043106</model-ac>
|
|
<locations>
|
|
<superfamilyhmmer3-location hmm-length="81" start="276" end="356">
|
|
<location-fragments/>
|
|
</superfamilyhmmer3-location>
|
|
</locations>
|
|
</superfamilyhmmer3-match>
|
|
</matches>
|
|
</protein>
|
|
<protein>
|
|
<sequence md5="493932c1f43289805b4c4e651ceb9249">GRGLLPFVLLALGIXAPWAVEGAENALKGGACPPRKIVQCLRYEKPKCTSDWQCPDKKKCCRDTCAIKCLNPVAITNPVKVKPGKCPVVYGQCMMLNPPNHCKTDSQCLGDLKCCKSMCGKVCLTPVKA</sequence>
|
|
<xref id="P22298" name="P22298"/>
|
|
<matches>
|
|
<fingerprints-match evalue="1.4E-7" graphscan="IIII">
|
|
<signature ac="PR00003" desc="4-disulphide core signature" name="4DISULPHCORE">
|
|
<entry ac="IPR008197" desc="WAP-type 'four-disulfide core' domain" name="WAP_dom" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0030414" name="peptidase inhibitor activity"/>
|
|
<go-xref category="CELLULAR_COMPONENT" db="GO" id="GO:0005576" name="extracellular region"/>
|
|
</entry>
|
|
<signature-library-release library="PRINTS" version="42.0"/>
|
|
</signature>
|
|
<model-ac>PR00003</model-ac>
|
|
<locations>
|
|
<fingerprints-location motifNumber="3" pvalue="0.0" score="52.92" start="108" end="117">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="108" end="117" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
<fingerprints-location motifNumber="2" pvalue="0.0" score="49.17" start="79" end="88">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="79" end="88" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
<fingerprints-location motifNumber="1" pvalue="0.0" score="50.0" start="118" end="126">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="118" end="126" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
<fingerprints-location motifNumber="4" pvalue="0.0" score="47.92" start="101" end="108">
|
|
<location-fragments>
|
|
<fingerprints-location-fragment start="101" end="108" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</fingerprints-location>
|
|
</locations>
|
|
</fingerprints-match>
|
|
<hmmer2-match evalue="4.7E-32" score="122.5">
|
|
<signature ac="SM00217" name="wap2">
|
|
<entry ac="IPR008197" desc="WAP-type 'four-disulfide core' domain" name="WAP_dom" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0030414" name="peptidase inhibitor activity"/>
|
|
<go-xref category="CELLULAR_COMPONENT" db="GO" id="GO:0005576" name="extracellular region"/>
|
|
</entry>
|
|
<signature-library-release library="SMART" version="7.1"/>
|
|
</signature>
|
|
<model-ac>SM00217</model-ac>
|
|
<locations>
|
|
<hmmer2-location score="34.1" evalue="1.9E-5" hmm-start="1" hmm-end="51" hmm-length="51" hmm-bounds="COMPLETE" start="28" end="73">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="28" end="73" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
<hmmer2-location score="88.4" evalue="8.6E-22" hmm-start="1" hmm-end="51" hmm-length="51" hmm-bounds="COMPLETE" start="82" end="127">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="82" end="127" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
</locations>
|
|
</hmmer2-match>
|
|
<hmmer3-match evalue="1.3E-19" score="70.2">
|
|
<signature ac="PF00095" desc="WAP-type (Whey Acidic Protein) 'four-disulfide core'" name="WAP">
|
|
<entry ac="IPR008197" desc="WAP-type 'four-disulfide core' domain" name="WAP_dom" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0030414" name="peptidase inhibitor activity"/>
|
|
<go-xref category="CELLULAR_COMPONENT" db="GO" id="GO:0005576" name="extracellular region"/>
|
|
</entry>
|
|
<signature-library-release library="PFAM" version="31.0"/>
|
|
</signature>
|
|
<model-ac>PF00095</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="72" env-start="28" post-processed="true" score="36.0" evalue="6.1E-9" hmm-start="1" hmm-end="40" hmm-length="40" hmm-bounds="COMPLETE" start="28" end="72">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
<hmmer3-location env-end="126" env-start="82" post-processed="true" score="40.5" evalue="2.4E-10" hmm-start="1" hmm-end="40" hmm-length="40" hmm-bounds="COMPLETE" start="82" end="126">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="1.0E-20" score="75.3">
|
|
<signature ac="G3DSA:4.10.75.10">
|
|
<entry ac="IPR036645" desc="Elafin-like superfamily" name="Elafin-like_sf" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="GENE3D" version="4.2.0"/>
|
|
</signature>
|
|
<model-ac>3nggB00</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="76" env-start="24" post-processed="true" score="42.5" evalue="1.7E-10" hmm-start="6" hmm-end="48" hmm-length="50" hmm-bounds="COMPLETE" start="24" end="76">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="2.0E-28" score="100.0">
|
|
<signature ac="G3DSA:4.10.75.10">
|
|
<entry ac="IPR036645" desc="Elafin-like superfamily" name="Elafin-like_sf" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="GENE3D" version="4.2.0"/>
|
|
</signature>
|
|
<model-ac>2z7fI00</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="129" env-start="80" post-processed="true" score="65.0" evalue="1.8E-17" hmm-start="3" hmm-end="49" hmm-length="50" hmm-bounds="COMPLETE" start="80" end="129">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<panther-match evalue="2.2E-64" familyName="Not available" score="217.9">
|
|
<signature ac="PTHR19441" name="WHEY ACDIC PROTEIN WAP">
|
|
<signature-library-release library="PANTHER" version="12.0"/>
|
|
</signature>
|
|
<model-ac>PTHR19441</model-ac>
|
|
<locations>
|
|
<panther-location env-start="1" env-end="129" hmm-start="4" hmm-end="132" hmm-length="132" hmm-bounds="COMPLETE" start="2" end="129">
|
|
<location-fragments>
|
|
<panther-location-fragment start="2" end="129" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</panther-location>
|
|
</locations>
|
|
</panther-match>
|
|
<panther-match evalue="2.2E-64" familyName="Not available" score="217.9">
|
|
<signature ac="PTHR19441:SF44" name="ANTILEUKOPROTEINASE">
|
|
<signature-library-release library="PANTHER" version="12.0"/>
|
|
</signature>
|
|
<model-ac>PTHR19441:SF44</model-ac>
|
|
<locations>
|
|
<panther-location env-start="1" env-end="129" hmm-start="4" hmm-end="132" hmm-length="132" hmm-bounds="COMPLETE" start="2" end="129">
|
|
<location-fragments>
|
|
<panther-location-fragment start="2" end="129" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</panther-location>
|
|
</locations>
|
|
</panther-match>
|
|
<phobius-match>
|
|
<signature ac="SIGNAL_PEPTIDE_C_REGION" desc="C-terminal region of a signal peptide." name="Signal peptide C-region">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>SIGNAL_PEPTIDE_C_REGION</model-ac>
|
|
<locations>
|
|
<phobius-location start="15" end="22">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="15" end="22" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="SIGNAL_PEPTIDE" desc="Signal peptide region" name="Signal Peptide">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>SIGNAL_PEPTIDE</model-ac>
|
|
<locations>
|
|
<phobius-location start="1" end="22">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="1" end="22" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="SIGNAL_PEPTIDE_N_REGION" desc="N-terminal region of a signal peptide." name="Signal peptide N-region">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>SIGNAL_PEPTIDE_N_REGION</model-ac>
|
|
<locations>
|
|
<phobius-location start="1" end="2">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="1" end="2" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="SIGNAL_PEPTIDE_H_REGION" desc="Hydrophobic region of a signal peptide." name="Signal peptide H-region">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>SIGNAL_PEPTIDE_H_REGION</model-ac>
|
|
<locations>
|
|
<phobius-location start="3" end="14">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="3" end="14" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="NON_CYTOPLASMIC_DOMAIN" desc="Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region." name="Non cytoplasmic domain">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>NON_CYTOPLASMIC_DOMAIN</model-ac>
|
|
<locations>
|
|
<phobius-location start="23" end="129">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="23" end="129" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<profilescan-match>
|
|
<signature ac="PS51390" desc="WAP-type 'four-disulfide core' domain profile." name="WAP">
|
|
<entry ac="IPR008197" desc="WAP-type 'four-disulfide core' domain" name="WAP_dom" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0030414" name="peptidase inhibitor activity"/>
|
|
<go-xref category="CELLULAR_COMPONENT" db="GO" id="GO:0005576" name="extracellular region"/>
|
|
</entry>
|
|
<signature-library-release library="PROSITE_PROFILES" version="2018_02"/>
|
|
</signature>
|
|
<model-ac>PS51390</model-ac>
|
|
<locations>
|
|
<profilescan-location score="14.545" start="79" end="127">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="79" end="127" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
<profilescan-location score="13.453" start="25" end="73">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="25" end="73" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
</locations>
|
|
</profilescan-match>
|
|
<signalp-match>
|
|
<signature ac="SignalP-noTM" name="SignalP-noTM">
|
|
<signature-library-release library="SIGNALP_EUK" version="4.1"/>
|
|
</signature>
|
|
<model-ac>SignalP-noTM</model-ac>
|
|
<locations>
|
|
<signalp-location score="0.808" start="1" end="22">
|
|
<location-fragments>
|
|
<signalp-location-fragment start="1" end="22" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</signalp-location>
|
|
</locations>
|
|
</signalp-match>
|
|
<signalp-match>
|
|
<signature ac="SignalP-noTM" name="SignalP-noTM">
|
|
<signature-library-release library="SIGNALP_EUK" version="4.1"/>
|
|
</signature>
|
|
<model-ac>SignalP-noTM</model-ac>
|
|
<locations>
|
|
<signalp-location start="1" end="22">
|
|
<location-fragments>
|
|
<signalp-location-fragment start="1" end="22" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</signalp-location>
|
|
</locations>
|
|
</signalp-match>
|
|
<superfamilyhmmer3-match evalue="1.7E-10">
|
|
<signature ac="SSF57256" name="Elafin-like">
|
|
<entry ac="IPR036645" desc="Elafin-like superfamily" name="Elafin-like_sf" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="SUPERFAMILY" version="1.75"/>
|
|
</signature>
|
|
<model-ac>0053294</model-ac>
|
|
<locations>
|
|
<superfamilyhmmer3-location hmm-length="57" start="26" end="73">
|
|
<location-fragments/>
|
|
</superfamilyhmmer3-location>
|
|
</locations>
|
|
</superfamilyhmmer3-match>
|
|
<superfamilyhmmer3-match evalue="6.8E-13">
|
|
<signature ac="SSF57256" name="Elafin-like">
|
|
<entry ac="IPR036645" desc="Elafin-like superfamily" name="Elafin-like_sf" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="SUPERFAMILY" version="1.75"/>
|
|
</signature>
|
|
<model-ac>0053294</model-ac>
|
|
<locations>
|
|
<superfamilyhmmer3-location hmm-length="57" start="75" end="127">
|
|
<location-fragments/>
|
|
</superfamilyhmmer3-location>
|
|
</locations>
|
|
</superfamilyhmmer3-match>
|
|
</matches>
|
|
</protein>
|
|
<protein>
|
|
<sequence md5="1fb3569701c50e369fa112ac96b5e459">MEVKGKKKLTGKGTKMSQEKSKFHKNNDSGSSKTFPKKVVKEGGPKITSKNFEKTATKPGKKGVKQFKNKQQGDRIPKNKFQQANKFNQKRKFQPDSKSDESAAKKPKWDEFKKKKKELKQSRQLSDKTNYDIVIRAKQIWEILRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQFGNEEQRKQAFEELRGDLVELSKAKYSRNIVKKFLMYGSKAQIAEIIRSFKGHVRKLLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLEVQPEKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSEMIEAIREAVVYLAHTHDGARVAMYCLWHGTPKDRKVIVKTMKTYIEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIINSLPNIVNDKYGRKVLLYLLSPRDPAHTVREIIEVLQKGDGNAHSKKDTEIRRRELLESISPALLSYLQGHAQEVVLDKSACVLVADILGTATGDVQPAMDAVASLAAAELHPGGKDGELHIAEHPAGHLVLKWLIEQDKKMKERGREGCFAKTLIERVGVKNLKSWASVNRGAIILSSLLQSSDQEVANKVKAGLKSLIPALEKSKNTSKGIEMLLEKLTA</sequence>
|
|
<xref id="A2VDN9" name="A2VDN9"/>
|
|
<matches>
|
|
<hmmer2-match evalue="1.6E-34" score="130.7">
|
|
<signature ac="SM00025" name="pum_5">
|
|
<entry ac="IPR001313" desc="Pumilio RNA-binding repeat" name="Pumilio_RNA-bd_rpt" type="REPEAT">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003723" name="RNA binding"/>
|
|
</entry>
|
|
<signature-library-release library="SMART" version="7.1"/>
|
|
</signature>
|
|
<model-ac>SM00025</model-ac>
|
|
<locations>
|
|
<hmmer2-location score="28.3" evalue="0.0011" hmm-start="1" hmm-end="39" hmm-length="39" hmm-bounds="COMPLETE" start="200" end="235">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="200" end="235" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
<hmmer2-location score="25.4" evalue="0.0082" hmm-start="1" hmm-end="39" hmm-length="39" hmm-bounds="COMPLETE" start="164" end="199">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="164" end="199" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
<hmmer2-location score="22.1" evalue="0.079" hmm-start="1" hmm-end="39" hmm-length="39" hmm-bounds="COMPLETE" start="423" end="459">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="423" end="459" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
<hmmer2-location score="16.0" evalue="3.9" hmm-start="1" hmm-end="39" hmm-length="39" hmm-bounds="COMPLETE" start="236" end="272">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="236" end="272" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
<hmmer2-location score="26.2" evalue="0.0045" hmm-start="1" hmm-end="39" hmm-length="39" hmm-bounds="COMPLETE" start="349" end="384">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="349" end="384" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
<hmmer2-location score="12.8" evalue="10.0" hmm-start="1" hmm-end="39" hmm-length="39" hmm-bounds="COMPLETE" start="385" end="421">
|
|
<location-fragments>
|
|
<hmmer2-location-fragment start="385" end="421" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</hmmer2-location>
|
|
</locations>
|
|
</hmmer2-match>
|
|
<hmmer3-match evalue="3.6E-53" score="179.7">
|
|
<signature ac="PF08144" desc="CPL (NUC119) domain" name="CPL">
|
|
<entry ac="IPR012959" desc="CPL domain" name="CPL_dom" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003723" name="RNA binding"/>
|
|
</entry>
|
|
<signature-library-release library="PFAM" version="31.0"/>
|
|
</signature>
|
|
<model-ac>PF08144</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="573" env-start="433" post-processed="true" score="173.2" evalue="3.5E-51" hmm-start="1" hmm-end="141" hmm-length="143" hmm-bounds="N_TERMINAL_COMPLETE" start="433" end="571">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="8.1E-70" score="237.5">
|
|
<signature ac="G3DSA:1.25.10.10">
|
|
<entry ac="IPR011989" desc="Armadillo-like helical" name="ARM-like" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="GENE3D" version="4.2.0"/>
|
|
</signature>
|
|
<model-ac>3k49A00</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="321" env-start="135" post-processed="true" score="127.0" evalue="3.0E-36" hmm-start="5" hmm-end="182" hmm-length="369" hmm-bounds="N_TERMINAL_COMPLETE" start="135" end="320">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<mobidblite-match>
|
|
<signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction">
|
|
<signature-library-release library="MOBIDB_LITE" version="1.5"/>
|
|
</signature>
|
|
<model-ac>mobidb-lite</model-ac>
|
|
<locations>
|
|
<mobidblite-location sequence-feature="Polyampholyte" start="91" end="108">
|
|
<location-fragments>
|
|
<mobidblite-location-fragment start="91" end="108" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</mobidblite-location>
|
|
<mobidblite-location sequence-feature="Polar" start="76" end="90">
|
|
<location-fragments>
|
|
<mobidblite-location-fragment start="76" end="90" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</mobidblite-location>
|
|
<mobidblite-location sequence-feature="Polyampholyte" start="1" end="27">
|
|
<location-fragments>
|
|
<mobidblite-location-fragment start="1" end="27" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</mobidblite-location>
|
|
<mobidblite-location start="1" end="108">
|
|
<location-fragments>
|
|
<mobidblite-location-fragment start="1" end="108" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</mobidblite-location>
|
|
</locations>
|
|
</mobidblite-match>
|
|
<mobidblite-match>
|
|
<signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction">
|
|
<signature-library-release library="MOBIDB_LITE" version="1.5"/>
|
|
</signature>
|
|
<model-ac>mobidb-lite</model-ac>
|
|
<locations>
|
|
<mobidblite-location sequence-feature="Polyampholyte" start="1" end="27">
|
|
<location-fragments>
|
|
<mobidblite-location-fragment start="1" end="27" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</mobidblite-location>
|
|
</locations>
|
|
</mobidblite-match>
|
|
<mobidblite-match>
|
|
<signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction">
|
|
<signature-library-release library="MOBIDB_LITE" version="1.5"/>
|
|
</signature>
|
|
<model-ac>mobidb-lite</model-ac>
|
|
<locations>
|
|
<mobidblite-location sequence-feature="Polyampholyte" start="91" end="108">
|
|
<location-fragments>
|
|
<mobidblite-location-fragment start="91" end="108" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</mobidblite-location>
|
|
</locations>
|
|
</mobidblite-match>
|
|
<mobidblite-match>
|
|
<signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction">
|
|
<signature-library-release library="MOBIDB_LITE" version="1.5"/>
|
|
</signature>
|
|
<model-ac>mobidb-lite</model-ac>
|
|
<locations>
|
|
<mobidblite-location sequence-feature="" start="1" end="108">
|
|
<location-fragments>
|
|
<mobidblite-location-fragment start="1" end="108" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</mobidblite-location>
|
|
</locations>
|
|
</mobidblite-match>
|
|
<mobidblite-match>
|
|
<signature ac="mobidb-lite" desc="consensus disorder prediction" name="disorder_prediction">
|
|
<signature-library-release library="MOBIDB_LITE" version="1.5"/>
|
|
</signature>
|
|
<model-ac>mobidb-lite</model-ac>
|
|
<locations>
|
|
<mobidblite-location sequence-feature="Polar" start="76" end="90">
|
|
<location-fragments>
|
|
<mobidblite-location-fragment start="76" end="90" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</mobidblite-location>
|
|
</locations>
|
|
</mobidblite-match>
|
|
<panther-match evalue="4.3E-242" familyName="Not available" score="807.4">
|
|
<signature ac="PTHR13389" name="UNCHARACTERIZED">
|
|
<signature-library-release library="PANTHER" version="12.0"/>
|
|
</signature>
|
|
<model-ac>PTHR13389</model-ac>
|
|
<locations>
|
|
<panther-location env-start="1" env-end="647" hmm-start="1" hmm-end="609" hmm-length="611" hmm-bounds="COMPLETE" start="1" end="646">
|
|
<location-fragments>
|
|
<panther-location-fragment start="1" end="646" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</panther-location>
|
|
</locations>
|
|
</panther-match>
|
|
<profilescan-match>
|
|
<signature ac="PS50302" desc="Pumilio RNA-binding repeat profile." name="PUM">
|
|
<entry ac="IPR001313" desc="Pumilio RNA-binding repeat" name="Pumilio_RNA-bd_rpt" type="REPEAT">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003723" name="RNA binding"/>
|
|
</entry>
|
|
<signature-library-release library="PROSITE_PROFILES" version="2018_02"/>
|
|
</signature>
|
|
<model-ac>PS50302</model-ac>
|
|
<locations>
|
|
<profilescan-location score="6.587" start="163" end="199">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="163" end="199" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
<profilescan-location score="4.651" start="236" end="271">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="236" end="271" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
<profilescan-location score="4.511" start="385" end="422">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="385" end="422" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
<profilescan-location score="4.604" start="492" end="530">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="492" end="530" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
<profilescan-location score="6.144" start="349" end="384">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="349" end="384" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
<profilescan-location score="8.337" start="423" end="459">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="423" end="459" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
<profilescan-location score="8.174" start="200" end="235">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="200" end="235" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
</locations>
|
|
</profilescan-match>
|
|
<profilescan-match>
|
|
<signature ac="PS50303" desc="Pumilio homology domain (PUM-HD) profile." name="PUM_HD">
|
|
<entry ac="IPR033133" desc="Pumilio homology domain" name="PUM-HD" type="DOMAIN">
|
|
<go-xref category="MOLECULAR_FUNCTION" db="GO" id="GO:0003723" name="RNA binding"/>
|
|
</entry>
|
|
<signature-library-release library="PROSITE_PROFILES" version="2018_02"/>
|
|
</signature>
|
|
<model-ac>PS50303</model-ac>
|
|
<locations>
|
|
<profilescan-location score="46.174" start="136" end="489">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="136" end="489" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
</locations>
|
|
</profilescan-match>
|
|
<superfamilyhmmer3-match evalue="1.09E-8">
|
|
<signature ac="SSF48371" name="ARM repeat">
|
|
<entry ac="IPR016024" desc="Armadillo-type fold" name="ARM-type_fold" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="SUPERFAMILY" version="1.75"/>
|
|
</signature>
|
|
<model-ac>0048121</model-ac>
|
|
<locations>
|
|
<superfamilyhmmer3-location hmm-length="339" start="488" end="645">
|
|
<location-fragments/>
|
|
</superfamilyhmmer3-location>
|
|
</locations>
|
|
</superfamilyhmmer3-match>
|
|
<superfamilyhmmer3-match evalue="1.69E-77">
|
|
<signature ac="SSF48371" name="ARM repeat">
|
|
<entry ac="IPR016024" desc="Armadillo-type fold" name="ARM-type_fold" type="HOMOLOGOUS_SUPERFAMILY"/>
|
|
<signature-library-release library="SUPERFAMILY" version="1.75"/>
|
|
</signature>
|
|
<model-ac>0048121</model-ac>
|
|
<locations>
|
|
<superfamilyhmmer3-location hmm-length="339" start="145" end="478">
|
|
<location-fragments/>
|
|
</superfamilyhmmer3-location>
|
|
</locations>
|
|
</superfamilyhmmer3-match>
|
|
</matches>
|
|
</protein>
|
|
<protein>
|
|
<sequence md5="b4005237b422c04aa8a462d33e929447">MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSTDVQTLNAKVDQLSNDVTAIRSDVQAAKDDAARANQRLDNQAHSYRK</sequence>
|
|
<xref id="P02939" name="P02939"/>
|
|
<matches>
|
|
<coils-match>
|
|
<signature ac="Coil" name="Coil">
|
|
<signature-library-release library="COILS" version="2.2.1"/>
|
|
</signature>
|
|
<model-ac>Coil</model-ac>
|
|
<locations>
|
|
<coils-location start="27" end="75">
|
|
<location-fragments>
|
|
<coils-location-fragment start="27" end="75" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</coils-location>
|
|
</locations>
|
|
</coils-match>
|
|
<hmmer3-match evalue="2.7E-25" score="88.4">
|
|
<signature ac="PF04728" desc="Lipoprotein leucine-zipper" name="LPP">
|
|
<entry ac="IPR006817" desc="Lipoprotein leucine-zipper" name="Lipoprotein_leucine-zipper_dom" type="DOMAIN">
|
|
<go-xref category="CELLULAR_COMPONENT" db="GO" id="GO:0019867" name="outer membrane"/>
|
|
</entry>
|
|
<signature-library-release library="PFAM" version="31.0"/>
|
|
</signature>
|
|
<model-ac>PF04728</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="78" env-start="26" post-processed="true" score="88.2" evalue="3.2E-25" hmm-start="1" hmm-end="53" hmm-length="53" hmm-bounds="COMPLETE" start="26" end="78">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="2.0E-29" score="100.7">
|
|
<signature ac="PIRSF002855" name="Murein-lipo">
|
|
<entry ac="IPR016367" desc="Murein-lipoprotein" name="Murein-lipoprotein" type="FAMILY"/>
|
|
<signature-library-release library="PIRSF" version="3.02"/>
|
|
</signature>
|
|
<model-ac>PIRSF002855</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="78" env-start="1" post-processed="false" score="100.6" evalue="2.2E-29" hmm-start="1" hmm-end="78" hmm-length="79" hmm-bounds="COMPLETE" start="1" end="78">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<hmmer3-match evalue="1.2E-31" score="110.6">
|
|
<signature ac="G3DSA:1.20.5.190">
|
|
<signature-library-release library="GENE3D" version="4.2.0"/>
|
|
</signature>
|
|
<model-ac>1jccC00</model-ac>
|
|
<locations>
|
|
<hmmer3-location env-end="77" env-start="22" post-processed="true" score="110.4" evalue="1.4E-31" hmm-start="1" hmm-end="56" hmm-length="56" hmm-bounds="COMPLETE" start="22" end="77">
|
|
<location-fragments/>
|
|
</hmmer3-location>
|
|
</locations>
|
|
</hmmer3-match>
|
|
<panther-match evalue="2.4E-35" familyName="Not available" score="123.0">
|
|
<signature ac="PTHR38763" name="FAMILY NOT NAMED">
|
|
<entry ac="IPR016367" desc="Murein-lipoprotein" name="Murein-lipoprotein" type="FAMILY"/>
|
|
<signature-library-release library="PANTHER" version="12.0"/>
|
|
</signature>
|
|
<model-ac>PTHR38763</model-ac>
|
|
<locations>
|
|
<panther-location env-start="1" env-end="78" hmm-start="1" hmm-end="78" hmm-length="78" hmm-bounds="COMPLETE" start="1" end="78">
|
|
<location-fragments>
|
|
<panther-location-fragment start="1" end="78" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</panther-location>
|
|
</locations>
|
|
</panther-match>
|
|
<phobius-match>
|
|
<signature ac="NON_CYTOPLASMIC_DOMAIN" desc="Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region." name="Non cytoplasmic domain">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>NON_CYTOPLASMIC_DOMAIN</model-ac>
|
|
<locations>
|
|
<phobius-location start="26" end="78">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="26" end="78" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="SIGNAL_PEPTIDE_N_REGION" desc="N-terminal region of a signal peptide." name="Signal peptide N-region">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>SIGNAL_PEPTIDE_N_REGION</model-ac>
|
|
<locations>
|
|
<phobius-location start="1" end="5">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="1" end="5" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="SIGNAL_PEPTIDE" desc="Signal peptide region" name="Signal Peptide">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>SIGNAL_PEPTIDE</model-ac>
|
|
<locations>
|
|
<phobius-location start="1" end="25">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="1" end="25" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="SIGNAL_PEPTIDE_H_REGION" desc="Hydrophobic region of a signal peptide." name="Signal peptide H-region">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>SIGNAL_PEPTIDE_H_REGION</model-ac>
|
|
<locations>
|
|
<phobius-location start="6" end="17">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="6" end="17" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<phobius-match>
|
|
<signature ac="SIGNAL_PEPTIDE_C_REGION" desc="C-terminal region of a signal peptide." name="Signal peptide C-region">
|
|
<signature-library-release library="PHOBIUS" version="1.01"/>
|
|
</signature>
|
|
<model-ac>SIGNAL_PEPTIDE_C_REGION</model-ac>
|
|
<locations>
|
|
<phobius-location start="18" end="25">
|
|
<location-fragments>
|
|
<phobius-location-fragment start="18" end="25" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</phobius-location>
|
|
</locations>
|
|
</phobius-match>
|
|
<profilescan-match>
|
|
<signature ac="PS51257" desc="Prokaryotic membrane lipoprotein lipid attachment site profile." name="PROKAR_LIPOPROTEIN">
|
|
<signature-library-release library="PROSITE_PROFILES" version="2018_02"/>
|
|
</signature>
|
|
<model-ac>PS51257</model-ac>
|
|
<locations>
|
|
<profilescan-location score="6.0" start="1" end="21">
|
|
<location-fragments>
|
|
<profilescan-location-fragment start="1" end="21" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
<alignment>Not available</alignment>
|
|
</profilescan-location>
|
|
</locations>
|
|
</profilescan-match>
|
|
<signalp-match>
|
|
<signature ac="SignalP-noTM" name="SignalP-noTM">
|
|
<signature-library-release library="SIGNALP_GRAM_NEGATIVE" version="4.1"/>
|
|
</signature>
|
|
<model-ac>SignalP-noTM</model-ac>
|
|
<locations>
|
|
<signalp-location score="0.624" start="1" end="25">
|
|
<location-fragments>
|
|
<signalp-location-fragment start="1" end="25" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</signalp-location>
|
|
</locations>
|
|
</signalp-match>
|
|
<signalp-match>
|
|
<signature ac="SignalP-noTM" name="SignalP-noTM">
|
|
<signature-library-release library="SIGNALP_EUK" version="4.1"/>
|
|
</signature>
|
|
<model-ac>SignalP-noTM</model-ac>
|
|
<locations>
|
|
<signalp-location start="1" end="23">
|
|
<location-fragments>
|
|
<signalp-location-fragment start="1" end="23" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</signalp-location>
|
|
</locations>
|
|
</signalp-match>
|
|
<signalp-match>
|
|
<signature ac="SignalP-noTM" name="SignalP-noTM">
|
|
<signature-library-release library="SIGNALP_EUK" version="4.1"/>
|
|
</signature>
|
|
<model-ac>SignalP-noTM</model-ac>
|
|
<locations>
|
|
<signalp-location score="0.607" start="1" end="23">
|
|
<location-fragments>
|
|
<signalp-location-fragment start="1" end="23" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</signalp-location>
|
|
</locations>
|
|
</signalp-match>
|
|
<signalp-match>
|
|
<signature ac="SignalP-TM" name="SignalP-TM">
|
|
<signature-library-release library="SIGNALP_GRAM_POSITIVE" version="4.1"/>
|
|
</signature>
|
|
<model-ac>SignalP-TM</model-ac>
|
|
<locations>
|
|
<signalp-location score="0.622" start="1" end="25">
|
|
<location-fragments>
|
|
<signalp-location-fragment start="1" end="25" dc-status="CONTINUOUS"/>
|
|
</location-fragments>
|
|
</signalp-location>
|
|
</locations>
|
|
</signalp-match>
|
|
<superfamilyhmmer3-match evalue="2.62E-22">
|
|
<signature ac="SSF58042" name="Outer membrane lipoprotein">
|
|
<signature-library-release library="SUPERFAMILY" version="1.75"/>
|
|
</signature>
|
|
<model-ac>0053520</model-ac>
|
|
<locations>
|
|
<superfamilyhmmer3-location hmm-length="51" start="24" end="73">
|
|
<location-fragments/>
|
|
</superfamilyhmmer3-location>
|
|
</locations>
|
|
</superfamilyhmmer3-match>
|
|
</matches>
|
|
</protein>
|
|
</protein-matches> |