221 lines
4.0 KiB
Python
221 lines
4.0 KiB
Python
from pymol.cgo import *
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cgo = [
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BEGIN, LINES,
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COLOR, 1,1,1,
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VERTEX, 0,0,0,
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COLOR, 0,0,1,
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VERTEX, 0,0,1,
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COLOR, 1,1,1,
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VERTEX, 0,0,0,
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COLOR, 0,1,0,
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VERTEX, 0,1,0,
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COLOR, 1,1,1,
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VERTEX, 0,0,0,
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COLOR, 1,0,0,
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VERTEX, 1,0,0,
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END,
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# nitrogen
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COLOR, 0.25, 0.25, 1.00,
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SPHERE, 0.25, 0.25, 1.00, 0.12,
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# oxygen
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COLOR, 1.00, 0.20, 0.20,
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SPHERE, 1.00, 0.20, 0.20, 0.12,
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# sulfur
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COLOR, 1.00, 0.50, 0.00,
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SPHERE, 1.00, 0.50, 0.00, 0.12,
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]
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set1 = [
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# carbon (GREEN)
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COLOR, 0.20, 1.00, 0.20,
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SPHERE, 0.20, 1.00, 0.20, 0.12,
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# cyan (CYAN)
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COLOR, 0.00, 1.00, 1.00,
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SPHERE, 0.00, 1.00, 1.00, 0.10,
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# magenta (MAGENTA)
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COLOR, 1.00, 0.20, 0.80,
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SPHERE, 1.00, 0.20, 0.80, 0.10,
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# yellow (YELLOW)
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COLOR, 1.00, 1.00, 0.00,
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SPHERE, 1.00, 1.00, 0.00, 0.10,
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# salmon (SALMON)
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COLOR, 1.00, 0.60, 0.60,
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SPHERE, 1.00, 0.60, 0.60, 0.10,
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# gray90 (WHITE)
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COLOR, 0.90, 0.90, 0.90,
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SPHERE, 0.90, 0.90, 0.90, 0.10,
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# slate (BLUE)
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COLOR, 0.50, 0.50, 1.00,
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SPHERE, 0.50, 0.50, 1.00, 0.10,
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# brightorange (ORANGE)
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COLOR, 1.00, 0.70, 0.20,
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SPHERE, 1.00, 0.70, 0.20, 0.10,
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]
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set2 = [
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# smudge (GREEN) *NEW
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COLOR, 0.55, 0.7, 0.40,
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SPHERE, 0.55, 0.7, 0.40, 0.06,
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# deepteal (CYAN)
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COLOR, 0.1, 0.60, 0.60,
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SPHERE, 0.1, 0.60, 0.60, 0.06,
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# hotpink (MAGENTA)
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COLOR, 1.00, 0.00, 0.50,
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SPHERE, 1.00, 0.00, 0.50, 0.06,
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# yelloworange (ORANGE) *NEW
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COLOR, 1.00, 0.87, 0.37,
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SPHERE, 1.00, 0.87, 0.37, 0.04,
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# violetpurple (SALMON) *NEW
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COLOR, 0.55, 0.25, 0.60,
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SPHERE, 0.55, 0.25, 0.60, 0.06,
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# grey70 (WHITE)
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COLOR, 0.70, 0.70, 0.70,
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SPHERE, 0.70, 0.70, 0.70, 0.06,
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# marine (BLUE)
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COLOR, 0.00, 0.50, 1.00,
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SPHERE, 0.00, 0.50, 1.00, 0.03,
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# olive (ORANGE)
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COLOR, 0.77, 0.70, 0.0,
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SPHERE, 0.77, 0.70, 0.0, 0.06,
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]
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set3 = [
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# lime (GREEN)
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COLOR, 0.50, 1.00, 0.50,
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SPHERE, 0.50, 1.00, 0.50, 0.04,
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# aquamarine (CYAN)
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COLOR, 0.50, 1.00, 1.00,
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SPHERE, 0.50, 1.00, 1.00, 0.04,
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# dirtyviolet (MAGENTA) *NEW
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COLOR, 0.70, 0.50, 0.70,
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SPHERE, 0.70, 0.50, 0.70, 0.04,
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# wheat (YELLOW)
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COLOR, 0.99, 0.82, 0.65,
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SPHERE, 0.99, 0.82, 0.65, 0.06,
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# deepsalmon (SALMON) *NEW
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COLOR, 1.00, 0.42, 0.42,
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SPHERE, 1.00, 0.42, 0.42, 0.04,
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# lightpink (WHITE) *NEW
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COLOR, 1.00, 0.75, 0.87,
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SPHERE, 1.0, 0.75, 0.87, 0.04,
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# teal (BLUE)
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COLOR, 0.00, 0.75, 0.75,
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SPHERE, 0.00, 0.75, 0.75, 0.04,
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# limon (ORANGE) *NEW
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COLOR, 0.75, 1.00, 0.25,
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SPHERE, 0.75, 1.00, 0.25, 0.08,
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]
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set4 = [
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# bluegreen (GREEN)
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COLOR, 0.0, 1.0, 0.50,
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SPHERE, 0.0, 1.0, 0.50, 0.08,
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# skyblue (CYAN) *NEW
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COLOR, 0.20, 0.50, 0.80,
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SPHERE, 0.20, 0.50, 0.80, 0.08,
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# warmpink (MAGENTA) *NEW
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COLOR, 0.85, 0.20, 0.50,
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SPHERE, 0.85, 0.20, 0.50, 0.08,
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# paleyellow (YELLOW)
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COLOR, 1.00, 1.00, 0.50,
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SPHERE, 1.00, 1.00, 0.50, 0.08,
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# violet (SALMON)
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COLOR, 1.00, 0.50, 1.0,
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SPHERE, 1.00, 0.50, 1.0, 0.03,
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# bluewhite (WHITE) *NEW
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COLOR, 0.85, 0.85, 1.0,
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SPHERE, 0.85, 0.85, 1.0, 0.08,
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# greencyan (BLUE) *NEW
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COLOR, 0.25, 1.00, 0.75,
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SPHERE, 0.25, 1.00, 0.75, 0.08,
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# sand (ORANGE) *NEW
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COLOR, 0.72, 0.55, 0.30,
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SPHERE, 0.72, 0.55, 0.30, 0.08,
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]
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set5 = [
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# forest (GREEN) *UPDATED
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COLOR, 0.20, 0.60, 0.20,
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SPHERE, 0.20, 0.60, 0.20, 0.03,
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# lightteal (CYAN) *NEW
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COLOR, 0.40, 0.70, 0.70,
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SPHERE, 0.40, 0.70, 0.70, 0.03,
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# darksalmon (MAGENTA) *NEW
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COLOR, 0.73, 0.55, 0.52,
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SPHERE, 0.73, 0.55, 0.52, 0.08,
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# splitpea (YELLOW) *NEW
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COLOR, 0.52, 0.75, 0.00,
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SPHERE, 0.52, 0.75, 0.00, 0.03,
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# rasberry (SALMON) *NEW
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COLOR, 0.70, 0.30, 0.40,
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SPHERE, 0.70, 0.30, 0.40, 0.03,
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# grey50 (WHITE)
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COLOR, 0.50, 0.50, 0.50,
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SPHERE, 0.50, 0.50, 0.50, 0.03,
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# brown (ORANGE) *updated
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COLOR, 0.65, 0.32, 0.17,
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SPHERE, 0.65, 0.32, 0.17, 0.04,
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]
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cgo.extend(set1)
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cgo.extend(set2)
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cgo.extend(set3)
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cgo.extend(set4)
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cgo.extend(set5)
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cgo.extend([
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COLOR, 1,1,1,
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SPHERE, 0,0,0,0.5,
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])
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cmd.load_cgo(cgo,"cgo04")
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cmd.set("cgo_dot_width",20)
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