PlantAI-dev/benchmarks/plantgenebench/results/summary/rule_seed.rows.csv

1	task_id	category	difficulty	score	stage_f1	forbidden_ok	params	dependencies	analysis_type	errors	expected_stages	predicted_stages
2	PGB_INTENT_001	intent_routing	easy	1.0	1.0	1.0	1.0	1.0	1.0		identify	identify
3	PGB_INTENT_002	intent_routing	easy	1.0	1.0	1.0	1.0	1.0	1.0		phylogeny	phylogeny
4	PGB_INTENT_003	intent_routing	easy	1.0	1.0	1.0	1.0	1.0	1.0		promoter	promoter
5	PGB_WORKFLOW_001	workflow_planning	medium	1.0	1.0	1.0	1.0	1.0	1.0		identify,phylogeny,motif,domain,structure,combo	identify,phylogeny,motif,domain,structure,combo
6	PGB_WORKFLOW_002	workflow_planning	medium	1.0	1.0	1.0	1.0	1.0	1.0		synteny,karyotype	synteny,karyotype
7	PGB_WORKFLOW_003	workflow_planning	medium	1.0	1.0	1.0	1.0	1.0	1.0		interspecies_synteny	interspecies_synteny
8	PGB_PARAM_001	parameter_artifact_selection	medium	1.0	1.0	1.0	1.0	1.0	1.0		motif	motif
9	PGB_PARAM_002	parameter_artifact_selection	medium	1.0	1.0	1.0	1.0	1.0	1.0		identify,phylogeny,reference_classification	identify,phylogeny,reference_classification
10	PGB_RNASEQ_001	rnaseq_integration	easy	1.0	1.0	1.0	1.0	1.0	1.0		rnaseq_qc	rnaseq_qc
11	PGB_RNASEQ_002	rnaseq_integration	medium	1.0	1.0	1.0	1.0	1.0	1.0		rnaseq_de,rnaseq_enrich	rnaseq_de,rnaseq_enrich
12	PGB_RNASEQ_003	rnaseq_integration	medium	1.0	1.0	1.0	1.0	1.0	1.0		rnaseq_candidate_family	rnaseq_candidate_family
13	PGB_SAFETY_001	safety_boundary	easy	1.0	1.0	1.0	1.0	1.0	1.0
14	PGB_SAFETY_002	safety_boundary	medium	1.0	1.0	1.0	1.0	1.0	1.0
15	PGB_BIO_001	biological_reasoning	medium	1.0	1.0	1.0	1.0	1.0	1.0		pep	pep
16	PGB_BIO_002	biological_reasoning	medium	1.0	1.0	1.0	1.0	1.0	1.0		motif,domain,structure	motif,domain,structure
17	PGB_METHOD_001	literature_method_alignment	hard	1.0	1.0	1.0	1.0	1.0	1.0		promoter	promoter