248 lines
7.8 KiB
YAML
Executable File
248 lines
7.8 KiB
YAML
Executable File
name: rnaR
|
|
channels:
|
|
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/main
|
|
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/r
|
|
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge
|
|
- bioconda
|
|
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda
|
|
- conda-forge
|
|
- https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free
|
|
- defaults
|
|
dependencies:
|
|
- _libgcc_mutex=0.1=main
|
|
- _openmp_mutex=5.1=1_gnu
|
|
- _r-mutex=1.0.0=anacondar_1
|
|
- alsa-lib=1.1.5=h516909a_1002
|
|
- binutils_impl_linux-64=2.40=h5293946_0
|
|
- binutils_linux-64=2.40.0=hc2dff05_2
|
|
- blas=1.0=openblas
|
|
- bwidget=1.10.1=h9eba36c_0
|
|
- bzip2=1.0.8=h5eee18b_6
|
|
- c-ares=1.34.6=hd44998d_0
|
|
- ca-certificates=2026.2.25=hbd8a1cb_0
|
|
- cairo=1.18.4=h44eff21_0
|
|
- curl=8.18.0=h2d051e9_0
|
|
- expat=2.7.4=h7354ed3_0
|
|
- fastqc=0.12.1=hdfd78af_0
|
|
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
|
|
- fontconfig=2.15.0=h2c49b7f_0
|
|
- freetype=2.14.1=hf5b9546_0
|
|
- fribidi=1.0.16=h9fb5f84_0
|
|
- gcc_impl_linux-64=11.2.0=h1234567_1
|
|
- gcc_linux-64=11.2.0=h5c386dc_2
|
|
- gettext=0.25.1=h92eb808_0
|
|
- gettext-tools=0.25.1=h6a67909_0
|
|
- gfortran_impl_linux-64=11.2.0=h1234567_1
|
|
- gfortran_linux-64=11.2.0=hc2dff05_2
|
|
- giflib=5.2.2=hd590300_0
|
|
- glib=2.84.2=h6a678d5_0
|
|
- glib-tools=2.84.2=h6a678d5_0
|
|
- graphite2=1.3.14=h295c915_1
|
|
- gxx_impl_linux-64=11.2.0=h1234567_1
|
|
- gxx_linux-64=11.2.0=hc2dff05_2
|
|
- harfbuzz=10.2.0=hdfddeaa_1
|
|
- hisat2=2.2.2=h503566f_0
|
|
- htslib=1.21=h5efdd21_0
|
|
- icu=73.1=h6a678d5_0
|
|
- jansson=2.14=h5eee18b_1
|
|
- jpeg=9f=h5ce9db8_0
|
|
- kernel-headers_linux-64=4.18.0=h3108a97_1
|
|
- lcms2=2.17=heab6991_0
|
|
- ld_impl_linux-64=2.40=h12ee557_0
|
|
- lerc=4.0.0=h6a678d5_0
|
|
- libasprintf=0.25.1=hf2ab22a_0
|
|
- libasprintf-devel=0.25.1=hf2ab22a_0
|
|
- libbrotlicommon=1.2.0=h32cd6e7_0
|
|
- libbrotlidec=1.2.0=ha2c5f68_0
|
|
- libbrotlienc=1.2.0=h2e96acb_0
|
|
- libcurl=8.18.0=h3506a8c_0
|
|
- libdeflate=1.22=h5eee18b_0
|
|
- libev=4.33=h7f8727e_1
|
|
- libexpat=2.7.4=h7354ed3_0
|
|
- libffi=3.4.4=h6a678d5_1
|
|
- libgcc=15.2.0=h69a1729_7
|
|
- libgcc-devel_linux-64=11.2.0=h1234567_1
|
|
- libgcc-ng=15.2.0=h166f726_7
|
|
- libgettextpo=0.25.1=hf2ab22a_0
|
|
- libgettextpo-devel=0.25.1=hf2ab22a_0
|
|
- libgfortran-ng=11.2.0=h00389a5_1
|
|
- libgfortran5=11.2.0=h1234567_1
|
|
- libglib=2.84.2=h37c7471_0
|
|
- libgomp=15.2.0=h4751f2c_7
|
|
- libiconv=1.18=h75a1612_0
|
|
- libidn2=2.3.8=hf80d704_0
|
|
- libkrb5=1.22.1=h6d2bf13_0
|
|
- libmpdec=4.0.0=h5eee18b_0
|
|
- libnghttp2=1.67.1=h697f920_0
|
|
- libopenblas=0.3.30=h46f56fc_2
|
|
- libpng=1.6.54=hee55ce4_0
|
|
- libssh2=1.11.1=h251f7ec_0
|
|
- libstdcxx=15.2.0=h39759b7_7
|
|
- libstdcxx-devel_linux-64=11.2.0=h1234567_1
|
|
- libstdcxx-ng=15.2.0=hc03a8fd_7
|
|
- libtiff=4.7.1=h029b1ac_0
|
|
- libunistring=1.3=hb25bd0a_0
|
|
- libuuid=1.41.5=h5eee18b_0
|
|
- libwebp-base=1.6.0=hb7bb969_0
|
|
- libxcb=1.17.0=h9b100fa_0
|
|
- libxcrypt=4.4.36=hd590300_1
|
|
- libxml2=2.13.9=h2c43086_0
|
|
- libzlib=1.2.13=h4ab18f5_6
|
|
- lmdb=0.9.31=hb25bd0a_0
|
|
- lz4-c=1.9.4=h6a678d5_1
|
|
- make=4.2.1=h1bed415_1
|
|
- ncurses=6.5=h7934f7d_0
|
|
- openjdk=11.0.1=h600c080_1018
|
|
- openssl=3.6.1=h35e630c_1
|
|
- packaging=25.0=py314h06a4308_1
|
|
- pandoc=3.8=h06a4308_0
|
|
- pango=1.50.7=h668f713_2
|
|
- pcre2=10.42=hebb0a14_1
|
|
- perl=5.32.1=7_hd590300_perl5
|
|
- pip=26.0.1=pyhc872135_0
|
|
- pixman=0.46.4=h7934f7d_0
|
|
- pthread-stubs=0.3=h0ce48e5_1
|
|
- python=3.14.2=h90eec9f_101_cp314
|
|
- python_abi=3.14=2_cp314
|
|
- r-argparser=0.7.2=r43hc72bb7e_1
|
|
- r-askpass=1.2.0=r43h76d94ec_0
|
|
- r-backports=1.4.1=r43h76d94ec_0
|
|
- r-base=4.3.1=h8399a1e_1
|
|
- r-base64enc=0.1_3=r43h76d94ec_4
|
|
- r-bit=4.0.5=r43h76d94ec_0
|
|
- r-bit64=4.0.5=r43h76d94ec_0
|
|
- r-blob=1.2.4=r43h6115d3f_0
|
|
- r-broom=1.0.5=r43h6115d3f_0
|
|
- r-bslib=0.5.1=r43h6115d3f_0
|
|
- r-cachem=1.0.8=r43h76d94ec_0
|
|
- r-callr=3.7.3=r43h6115d3f_0
|
|
- r-cellranger=1.1.0=r43h6115d3f_0
|
|
- r-cli=3.6.1=r43h884c59f_0
|
|
- r-clipr=0.8.0=r43h6115d3f_0
|
|
- r-colorspace=2.1_0=r43h76d94ec_0
|
|
- r-conflicted=1.2.0=r43h142f84f_0
|
|
- r-cpp11=0.4.6=r43h6115d3f_0
|
|
- r-crayon=1.5.2=r43h6115d3f_0
|
|
- r-curl=5.1.0=r43h76d94ec_0
|
|
- r-data.table=1.14.8=r43h76d94ec_0
|
|
- r-dbi=1.1.3=r43h6115d3f_0
|
|
- r-dbplyr=2.3.4=r43h6115d3f_0
|
|
- r-digest=0.6.33=r43h884c59f_0
|
|
- r-dplyr=1.1.3=r43h884c59f_0
|
|
- r-dtplyr=1.3.1=r43h6115d3f_0
|
|
- r-ellipsis=0.3.2=r43h76d94ec_0
|
|
- r-evaluate=0.22=r43h6115d3f_0
|
|
- r-fansi=1.0.5=r43h76d94ec_0
|
|
- r-farver=2.1.1=r43h884c59f_0
|
|
- r-fastmap=1.1.1=r43h884c59f_0
|
|
- r-fontawesome=0.5.2=r43h6115d3f_0
|
|
- r-forcats=1.0.0=r43h6115d3f_0
|
|
- r-fs=1.6.3=r43h884c59f_0
|
|
- r-gargle=1.5.2=r43h142f84f_0
|
|
- r-generics=0.1.3=r43h142f84f_0
|
|
- r-ggplot2=3.5.2=r43hc72bb7e_0
|
|
- r-glue=1.6.2=r43h76d94ec_0
|
|
- r-googledrive=2.1.1=r43h6115d3f_0
|
|
- r-googlesheets4=1.1.1=r43h6115d3f_0
|
|
- r-gtable=0.3.4=r43h6115d3f_0
|
|
- r-haven=2.5.3=r43h884c59f_0
|
|
- r-highr=0.10=r43h6115d3f_0
|
|
- r-hms=1.1.3=r43h6115d3f_0
|
|
- r-htmltools=0.5.6.1=r43h76d94ec_0
|
|
- r-httr=1.4.7=r43h6115d3f_0
|
|
- r-ids=1.0.1=r43h142f84f_0
|
|
- r-isoband=0.2.7=r43h884c59f_0
|
|
- r-jquerylib=0.1.4=r43h6115d3f_0
|
|
- r-jsonlite=1.8.7=r43h76d94ec_0
|
|
- r-knitr=1.44=r43h6115d3f_0
|
|
- r-labeling=0.4.3=r43h6115d3f_0
|
|
- r-lattice=0.22_5=r43h76d94ec_0
|
|
- r-lifecycle=1.0.3=r43h142f84f_0
|
|
- r-lubridate=1.9.3=r43h76d94ec_0
|
|
- r-magrittr=2.0.3=r43h76d94ec_0
|
|
- r-mass=7.3_60=r43h76d94ec_0
|
|
- r-matrix=1.6_1.1=r43h76d94ec_0
|
|
- r-memoise=2.0.1=r43h6115d3f_0
|
|
- r-mgcv=1.9_0=r43h76d94ec_0
|
|
- r-mime=0.12=r43h76d94ec_0
|
|
- r-modelr=0.1.11=r43h6115d3f_0
|
|
- r-munsell=0.5.0=r43h6115d3f_0
|
|
- r-nlme=3.1_163=r43h640688f_0
|
|
- r-openssl=2.1.1=r43h76d94ec_0
|
|
- r-pheatmap=1.0.13=r43hc72bb7e_0
|
|
- r-pillar=1.9.0=r43h6115d3f_0
|
|
- r-pkgconfig=2.0.3=r43h6115d3f_0
|
|
- r-prettyunits=1.2.0=r43h142f84f_0
|
|
- r-processx=3.8.2=r43h76d94ec_0
|
|
- r-progress=1.2.2=r43h142f84f_0
|
|
- r-ps=1.7.5=r43h76d94ec_0
|
|
- r-purrr=1.0.2=r43h76d94ec_0
|
|
- r-r6=2.5.1=r43h6115d3f_0
|
|
- r-ragg=1.2.6=r43h884c59f_0
|
|
- r-rappdirs=0.3.3=r43h76d94ec_0
|
|
- r-rcolorbrewer=1.1_3=r43h6115d3f_1
|
|
- r-readr=2.1.4=r43h884c59f_0
|
|
- r-readxl=1.4.3=r43h884c59f_0
|
|
- r-rematch=2.0.0=r43h6115d3f_0
|
|
- r-rematch2=2.1.2=r43h142f84f_0
|
|
- r-reprex=2.0.2=r43h6115d3f_0
|
|
- r-rlang=1.1.1=r43h884c59f_0
|
|
- r-rmarkdown=2.25=r43h6115d3f_0
|
|
- r-rstudioapi=0.15.0=r43h6115d3f_0
|
|
- r-rvest=1.0.3=r43h6115d3f_0
|
|
- r-sass=0.4.7=r43h884c59f_0
|
|
- r-scales=1.2.1=r43h6115d3f_0
|
|
- r-selectr=0.4_2=r43h6115d3f_0
|
|
- r-stringi=1.7.12=r43h884c59f_0
|
|
- r-stringr=1.5.0=r43h6115d3f_0
|
|
- r-sys=3.4.2=r43h76d94ec_0
|
|
- r-systemfonts=1.0.5=r43h884c59f_0
|
|
- r-textshaping=0.3.7=r43h884c59f_0
|
|
- r-tibble=3.2.1=r43h76d94ec_0
|
|
- r-tidyr=1.3.0=r43h884c59f_0
|
|
- r-tidyselect=1.2.0=r43h6115d3f_0
|
|
- r-tidyverse=2.0.0=r43h6115d3f_0
|
|
- r-timechange=0.2.0=r43h884c59f_0
|
|
- r-tinytex=0.48=r43h142f84f_0
|
|
- r-tzdb=0.4.0=r43h884c59f_0
|
|
- r-utf8=1.2.4=r43h76d94ec_0
|
|
- r-uuid=1.1_1=r43h76d94ec_0
|
|
- r-vctrs=0.6.4=r43h884c59f_0
|
|
- r-viridislite=0.4.2=r43h6115d3f_0
|
|
- r-vroom=1.6.4=r43h884c59f_0
|
|
- r-withr=2.5.1=r43h6115d3f_0
|
|
- r-xfun=0.40=r43h76d94ec_0
|
|
- r-xml2=1.3.6=r43h40789d9_1
|
|
- r-yaml=2.3.7=r43h76d94ec_0
|
|
- readline=8.3=hc2a1206_0
|
|
- samtools=1.21=h50ea8bc_0
|
|
- setuptools=80.10.2=py314h06a4308_0
|
|
- sqlite=3.51.1=he0a8d7e_0
|
|
- stringtie=2.2.3=h43eeafb_0
|
|
- subread=2.0.6=he4a0461_2
|
|
- sysroot_linux-64=2.28=h3108a97_1
|
|
- tk=8.6.15=h54e0aa7_0
|
|
- tktable=2.10=hfce700a_2
|
|
- tzdata=2025c=he532380_0
|
|
- wheel=0.46.3=py314h06a4308_0
|
|
- xorg-libx11=1.8.12=h9b100fa_1
|
|
- xorg-libxau=1.0.12=h9b100fa_0
|
|
- xorg-libxdmcp=1.1.5=h9b100fa_0
|
|
- xorg-libxext=1.3.6=h9b100fa_0
|
|
- xorg-libxfixes=6.0.2=hb03c661_0
|
|
- xorg-libxi=1.8.2=hb9d3cd8_0
|
|
- xorg-libxrender=0.9.12=h9b100fa_0
|
|
- xorg-libxtst=1.2.5=hb9d3cd8_3
|
|
- xorg-xorgproto=2024.1=h5eee18b_1
|
|
- xz=5.6.4=h5eee18b_1
|
|
- zlib=1.2.13=h4ab18f5_6
|
|
- zstd=1.5.6=hc292b87_0
|
|
- pip:
|
|
- argcomplete==3.6.3
|
|
- pyyaml==6.0.3
|
|
- toml==0.10.2
|
|
- tomlkit==0.14.0
|
|
- xmltodict==1.0.4
|
|
- yq==3.4.3
|
|
prefix: /home/xia-lab/miniconda3/envs/rnaR
|