PlantAI-dev/codeMiaoshu/hexing/hexing.txt.md

核型图

数据

(1)Ft.gff (2)Ft.SPL.geneID (3)统计染色体长度(genome.len) seqkit fx2tab -l -n -i Ft.genome.fasta |grep "^Ft" |awk '{print $1"\t"$2}' > genome.len (4)共线性 Ft.tandem

绘图

Rscript karyogram_gene_family.R ../Ft.gff ../Ft.SPL.geneID ../genome.len ../Ft.tandem Ft.SPL.karyogram.pdf