PlantAI-dev/data/kegg_pathway_cache/list_pathway_ko.tsv

1	ko01100	Metabolic pathways
2	ko01110	Biosynthesis of secondary metabolites
3	ko01120	Microbial metabolism in diverse environments
4	ko01200	Carbon metabolism
5	ko01210	2-Oxocarboxylic acid metabolism
6	ko01212	Fatty acid metabolism
7	ko01230	Biosynthesis of amino acids
8	ko01232	Nucleotide metabolism
9	ko01250	Biosynthesis of nucleotide sugars
10	ko01240	Biosynthesis of cofactors
11	ko01220	Degradation of aromatic compounds
12	ko01310	Nitrogen cycle
13	ko01320	Sulfur cycle
14	ko00010	Glycolysis / Gluconeogenesis
15	ko00020	Citrate cycle (TCA cycle)
16	ko00030	Pentose phosphate pathway
17	ko00040	Pentose and glucuronate interconversions
18	ko00051	Fructose and mannose metabolism
19	ko00052	Galactose metabolism
20	ko00053	Ascorbate and aldarate metabolism
21	ko00500	Starch and sucrose metabolism
22	ko00620	Pyruvate metabolism
23	ko00630	Glyoxylate and dicarboxylate metabolism
24	ko00640	Propanoate metabolism
25	ko00650	Butanoate metabolism
26	ko00660	C5-Branched dibasic acid metabolism
27	ko00562	Inositol phosphate metabolism
28	ko00566	Sulfoquinovose metabolism
29	ko00190	Oxidative phosphorylation
30	ko00195	Photosynthesis
31	ko00196	Photosynthesis - antenna proteins
32	ko00710	Carbon fixation by Calvin cycle
33	ko00720	Other carbon fixation pathways
34	ko00680	Methane metabolism
35	ko00910	Nitrogen metabolism
36	ko00920	Sulfur metabolism
37	ko00061	Fatty acid biosynthesis
38	ko00062	Fatty acid elongation
39	ko00071	Fatty acid degradation
40	ko00073	Cutin, suberine and wax biosynthesis
41	ko00074	Mycolic acid biosynthesis
42	ko00100	Steroid biosynthesis
43	ko00120	Primary bile acid biosynthesis
44	ko00121	Secondary bile acid biosynthesis
45	ko00140	Steroid hormone biosynthesis
46	ko00561	Glycerolipid metabolism
47	ko00564	Glycerophospholipid metabolism
48	ko00565	Ether lipid metabolism
49	ko00600	Sphingolipid metabolism
50	ko00590	Arachidonic acid metabolism
51	ko00591	Linoleic acid metabolism
52	ko00592	alpha-Linolenic acid metabolism
53	ko01040	Biosynthesis of unsaturated fatty acids
54	ko00230	Purine metabolism
55	ko00240	Pyrimidine metabolism
56	ko00250	Alanine, aspartate and glutamate metabolism
57	ko00260	Glycine, serine and threonine metabolism
58	ko00270	Cysteine and methionine metabolism
59	ko00280	Valine, leucine and isoleucine degradation
60	ko00290	Valine, leucine and isoleucine biosynthesis
61	ko00300	Lysine biosynthesis
62	ko00310	Lysine degradation
63	ko00220	Arginine biosynthesis
64	ko00330	Arginine and proline metabolism
65	ko00340	Histidine metabolism
66	ko00350	Tyrosine metabolism
67	ko00360	Phenylalanine metabolism
68	ko00380	Tryptophan metabolism
69	ko00400	Phenylalanine, tyrosine and tryptophan biosynthesis
70	ko00410	beta-Alanine metabolism
71	ko00430	Taurine and hypotaurine metabolism
72	ko00440	Phosphonate and phosphinate metabolism
73	ko00450	Selenocompound metabolism
74	ko00460	Cyanoamino acid metabolism
75	ko00470	D-Amino acid metabolism
76	ko00480	Glutathione metabolism
77	ko00520	Amino sugar and nucleotide sugar metabolism
78	ko00541	Biosynthesis of various nucleotide sugars
79	ko00510	N-Glycan biosynthesis
80	ko00513	Various types of N-glycan biosynthesis
81	ko00512	Mucin type O-glycan biosynthesis
82	ko00515	Mannose type O-glycan biosynthesis
83	ko00514	Other types of O-glycan biosynthesis
84	ko00532	Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
85	ko00534	Glycosaminoglycan biosynthesis - heparan sulfate / heparin
86	ko00533	Glycosaminoglycan biosynthesis - keratan sulfate
87	ko00531	Glycosaminoglycan degradation
88	ko00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
89	ko00601	Glycosphingolipid biosynthesis - lacto and neolacto series
90	ko00603	Glycosphingolipid biosynthesis - globo and isoglobo series
91	ko00604	Glycosphingolipid biosynthesis - ganglio series
92	ko00511	Other glycan degradation
93	ko00540	Lipopolysaccharide biosynthesis
94	ko00542	O-Antigen repeat unit biosynthesis
95	ko00550	Peptidoglycan biosynthesis
96	ko00552	Teichoic acid biosynthesis
97	ko00571	Lipoarabinomannan (LAM) biosynthesis
98	ko00572	Arabinogalactan biosynthesis - Mycobacterium
99	ko00543	Exopolysaccharide biosynthesis
100	ko00730	Thiamine metabolism
101	ko00740	Riboflavin metabolism
102	ko00750	Vitamin B6 metabolism
103	ko00760	Nicotinate and nicotinamide metabolism
104	ko00770	Pantothenate and CoA biosynthesis
105	ko00780	Biotin metabolism
106	ko00785	Lipoic acid metabolism
107	ko00790	Folate biosynthesis
108	ko00670	One carbon pool by folate
109	ko00830	Retinol metabolism
110	ko00860	Porphyrin metabolism
111	ko00130	Ubiquinone and other terpenoid-quinone biosynthesis
112	ko00900	Terpenoid backbone biosynthesis
113	ko00902	Monoterpenoid biosynthesis
114	ko00909	Sesquiterpenoid and triterpenoid biosynthesis
115	ko00904	Diterpenoid biosynthesis
116	ko00906	Carotenoid biosynthesis
117	ko00905	Brassinosteroid biosynthesis
118	ko00981	Insect hormone biosynthesis
119	ko00908	Zeatin biosynthesis
120	ko00903	Limonene degradation
121	ko00907	Pinene, camphor and geraniol degradation
122	ko01052	Type I polyketide structures
123	ko00522	Biosynthesis of 12-, 14- and 16-membered macrolides
124	ko01051	Biosynthesis of ansamycins
125	ko01059	Biosynthesis of enediyne antibiotics
126	ko01056	Biosynthesis of type II polyketide backbone
127	ko01057	Biosynthesis of type II polyketide products
128	ko00253	Tetracycline biosynthesis
129	ko00523	Polyketide sugar unit biosynthesis
130	ko01054	Nonribosomal peptide structures
131	ko01053	Biosynthesis of siderophore group nonribosomal peptides
132	ko01055	Biosynthesis of vancomycin group antibiotics
133	ko00940	Phenylpropanoid biosynthesis
134	ko00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis
135	ko00941	Flavonoid biosynthesis
136	ko00944	Flavone and flavonol biosynthesis
137	ko00942	Anthocyanin biosynthesis
138	ko00943	Isoflavonoid biosynthesis
139	ko00946	Degradation of flavonoids
140	ko00901	Indole alkaloid biosynthesis
141	ko00403	Indole diterpene alkaloid biosynthesis
142	ko00950	Isoquinoline alkaloid biosynthesis
143	ko00960	Tropane, piperidine and pyridine alkaloid biosynthesis
144	ko00996	Biosynthesis of various alkaloids
145	ko00232	Caffeine metabolism
146	ko00965	Betalain biosynthesis
147	ko00966	Glucosinolate biosynthesis
148	ko00402	Benzoxazinoid biosynthesis
149	ko00311	Penicillin and cephalosporin biosynthesis
150	ko00332	Carbapenem biosynthesis
151	ko00261	Monobactam biosynthesis
152	ko00331	Clavulanic acid biosynthesis
153	ko00521	Streptomycin biosynthesis
154	ko00524	Neomycin, kanamycin and gentamicin biosynthesis
155	ko00525	Acarbose and validamycin biosynthesis
156	ko00401	Novobiocin biosynthesis
157	ko00404	Staurosporine biosynthesis
158	ko00405	Phenazine biosynthesis
159	ko00333	Prodigiosin biosynthesis
160	ko00254	Aflatoxin biosynthesis
161	ko00975	Biosynthesis of various siderophores
162	ko00998	Biosynthesis of various antibiotics
163	ko00999	Biosynthesis of various plant secondary metabolites
164	ko00997	Biosynthesis of various other secondary metabolites
165	ko00362	Benzoate degradation
166	ko00627	Aminobenzoate degradation
167	ko00364	Fluorobenzoate degradation
168	ko00625	Chloroalkane and chloroalkene degradation
169	ko00361	Chlorocyclohexane and chlorobenzene degradation
170	ko00623	Toluene degradation
171	ko00622	Xylene degradation
172	ko00633	Nitrotoluene degradation
173	ko00642	Ethylbenzene degradation
174	ko00643	Styrene degradation
175	ko00791	Atrazine degradation
176	ko00930	Caprolactam degradation
177	ko00363	Bisphenol degradation
178	ko00621	Dioxin degradation
179	ko00626	Naphthalene degradation
180	ko00624	Polycyclic aromatic hydrocarbon degradation
181	ko00365	Furfural degradation
182	ko00984	Steroid degradation
183	ko00980	Metabolism of xenobiotics by cytochrome P450
184	ko00982	Drug metabolism - cytochrome P450
185	ko00983	Drug metabolism - other enzymes
186	ko03020	RNA polymerase
187	ko03022	Basal transcription factors
188	ko03040	Spliceosome
189	ko03010	Ribosome
190	ko00970	Aminoacyl-tRNA biosynthesis
191	ko03013	Nucleocytoplasmic transport
192	ko03015	mRNA surveillance pathway
193	ko03008	Ribosome biogenesis in eukaryotes
194	ko03060	Protein export
195	ko04141	Protein processing in endoplasmic reticulum
196	ko04130	SNARE interactions in vesicular transport
197	ko04120	Ubiquitin mediated proteolysis
198	ko04122	Sulfur relay system
199	ko03050	Proteasome
200	ko03018	RNA degradation
201	ko03030	DNA replication
202	ko03410	Base excision repair
203	ko03420	Nucleotide excision repair
204	ko03430	Mismatch repair
205	ko03440	Homologous recombination
206	ko03450	Non-homologous end-joining
207	ko03460	Fanconi anemia pathway
208	ko03082	ATP-dependent chromatin remodeling
209	ko03083	Polycomb repressive complex
210	ko03230	Viral genome structure
211	ko03240	Viral replication
212	ko03250	Viral life cycle - HIV-1
213	ko03260	Virion - Human immunodeficiency virus
214	ko03271	Virion - Rotavirus
215	ko03262	Virion - Coronavirus
216	ko03261	Virion - Influenza virus
217	ko03263	Virion - Enterovirus
218	ko03264	Virion - Flavivirus and Alphavirus
219	ko03265	Virion - Ebolavirus, Lyssavirus and Morbillivirus
220	ko03273	Virion - Lassa virus and SFTS virus
221	ko03272	Virion - Hepatitis viruses
222	ko03266	Virion - Herpesvirus
223	ko03268	Virion - Orthopoxvirus
224	ko03267	Virion - Adenovirus
225	ko03259	Virion - Bacteriophages T4 and T7
226	ko03258	Virion - Bacteriophage lambda
227	ko02010	ABC transporters
228	ko02060	Phosphotransferase system (PTS)
229	ko03070	Bacterial secretion system
230	ko02020	Two-component system
231	ko04010	MAPK signaling pathway
232	ko04013	MAPK signaling pathway - fly
233	ko04016	MAPK signaling pathway - plant
234	ko04011	MAPK signaling pathway - yeast
235	ko04012	ErbB signaling pathway
236	ko04014	Ras signaling pathway
237	ko04015	Rap1 signaling pathway
238	ko04310	Wnt signaling pathway
239	ko04330	Notch signaling pathway
240	ko04340	Hedgehog signaling pathway
241	ko04341	Hedgehog signaling pathway - fly
242	ko04350	TGF-beta signaling pathway
243	ko04390	Hippo signaling pathway
244	ko04391	Hippo signaling pathway - fly
245	ko04392	Hippo signaling pathway - multiple species
246	ko04370	VEGF signaling pathway
247	ko04371	Apelin signaling pathway
248	ko04630	JAK-STAT signaling pathway
249	ko04064	NF-kappa B signaling pathway
250	ko04668	TNF signaling pathway
251	ko04066	HIF-1 signaling pathway
252	ko04068	FoxO signaling pathway
253	ko04020	Calcium signaling pathway
254	ko04070	Phosphatidylinositol signaling system
255	ko04072	Phospholipase D signaling pathway
256	ko04071	Sphingolipid signaling pathway
257	ko04024	cAMP signaling pathway
258	ko04022	cGMP-PKG signaling pathway
259	ko04151	PI3K-Akt signaling pathway
260	ko04152	AMPK signaling pathway
261	ko04150	mTOR signaling pathway
262	ko04075	Plant hormone signal transduction
263	ko04080	Neuroactive ligand-receptor interaction
264	ko04082	Neuroactive ligand signaling
265	ko04081	Hormone signaling
266	ko04060	Cytokine-cytokine receptor interaction
267	ko04061	Viral protein interaction with cytokine and cytokine receptor
268	ko04512	ECM-receptor interaction
269	ko04514	Cell adhesion molecule (CAM) interaction
270	ko04517	IgSF CAM signaling
271	ko04518	Integrin signaling
272	ko04519	Cadherin signaling
273	ko04144	Endocytosis
274	ko04145	Phagosome
275	ko04142	Lysosome biogenesis
276	ko04146	Peroxisome
277	ko04140	Autophagy - animal
278	ko04138	Autophagy - yeast
279	ko04136	Autophagy - other
280	ko04137	Mitophagy - animal
281	ko04139	Mitophagy - yeast
282	ko04148	Efferocytosis
283	ko04110	Cell cycle
284	ko04111	Cell cycle - yeast
285	ko04112	Cell cycle - Caulobacter
286	ko04113	Meiosis - yeast
287	ko04114	Oocyte meiosis
288	ko04210	Apoptosis
289	ko04214	Apoptosis - fly
290	ko04215	Apoptosis - multiple species
291	ko04216	Ferroptosis
292	ko04217	Necroptosis
293	ko04115	p53 signaling pathway
294	ko04218	Cellular senescence
295	ko04510	Focal adhesion
296	ko04520	Adherens junction
297	ko04530	Tight junction
298	ko04540	Gap junction
299	ko04550	Signaling pathways regulating pluripotency of stem cells
300	ko02024	Quorum sensing
301	ko05111	Biofilm formation - Vibrio cholerae
302	ko02025	Biofilm formation - Pseudomonas aeruginosa
303	ko02026	Biofilm formation - Escherichia coli
304	ko02030	Bacterial chemotaxis
305	ko02040	Flagellar assembly
306	ko04814	Motor proteins
307	ko04820	Cytoskeleton in muscle cells
308	ko04810	Regulation of actin cytoskeleton
309	ko04640	Hematopoietic cell lineage
310	ko04610	Complement and coagulation cascades
311	ko04611	Platelet activation
312	ko04613	Neutrophil extracellular trap formation
313	ko04620	Toll-like receptor signaling pathway
314	ko04624	Toll and Imd signaling pathway
315	ko04621	NOD-like receptor signaling pathway
316	ko04622	RIG-I-like receptor signaling pathway
317	ko04623	Cytosolic DNA-sensing pathway
318	ko04625	C-type lectin receptor signaling pathway
319	ko04650	Natural killer cell mediated cytotoxicity
320	ko04612	Antigen processing and presentation
321	ko04660	T cell receptor signaling pathway
322	ko04658	Th1 and Th2 cell differentiation
323	ko04659	Th17 cell differentiation
324	ko04657	IL-17 signaling pathway
325	ko04662	B cell receptor signaling pathway
326	ko04664	Fc epsilon RI signaling pathway
327	ko04666	Fc gamma R-mediated phagosome formation
328	ko04670	Leukocyte transendothelial migration
329	ko04672	Intestinal immune network for IgA production
330	ko04062	Chemokine signaling pathway
331	ko04911	Insulin secretion
332	ko04910	Insulin signaling pathway
333	ko04922	Glucagon signaling pathway
334	ko04923	Regulation of lipolysis in adipocytes
335	ko04920	Adipocytokine signaling pathway
336	ko03320	PPAR signaling pathway
337	ko04929	GnRH secretion
338	ko04912	GnRH signaling pathway
339	ko04913	Ovarian steroidogenesis
340	ko04915	Estrogen signaling pathway
341	ko04914	Progesterone-mediated oocyte maturation
342	ko04917	Prolactin signaling pathway
343	ko04921	Oxytocin signaling pathway
344	ko04926	Relaxin signaling pathway
345	ko04935	Growth hormone synthesis, secretion and action
346	ko04918	Thyroid hormone synthesis
347	ko04919	Thyroid hormone signaling pathway
348	ko04928	Parathyroid hormone synthesis, secretion and action
349	ko04916	Melanogenesis
350	ko04924	Renin secretion
351	ko04614	Renin-angiotensin system
352	ko04925	Aldosterone synthesis and secretion
353	ko04927	Cortisol synthesis and secretion
354	ko04260	Cardiac muscle contraction
355	ko04261	Adrenergic signaling in cardiomyocytes
356	ko04270	Vascular smooth muscle contraction
357	ko04970	Salivary secretion
358	ko04971	Gastric acid secretion
359	ko04972	Pancreatic secretion
360	ko04976	Bile secretion
361	ko04973	Carbohydrate digestion and absorption
362	ko04974	Protein digestion and absorption
363	ko04975	Fat digestion and absorption
364	ko04979	Cholesterol metabolism
365	ko04977	Vitamin digestion and absorption
366	ko04981	Folate transport and metabolism
367	ko04980	Cobalamin transport and metabolism
368	ko04978	Mineral absorption
369	ko04962	Vasopressin-regulated water reabsorption
370	ko04960	Aldosterone-regulated sodium reabsorption
371	ko04961	Endocrine and other factor-regulated calcium reabsorption
372	ko04964	Proximal tubule bicarbonate reclamation
373	ko04966	Collecting duct acid secretion
374	ko04724	Glutamatergic synapse
375	ko04727	GABAergic synapse
376	ko04725	Cholinergic synapse
377	ko04728	Dopaminergic synapse
378	ko04726	Serotonergic synapse
379	ko04720	Long-term potentiation
380	ko04730	Long-term depression
381	ko04723	Retrograde endocannabinoid signaling
382	ko04721	Synaptic vesicle cycle
383	ko04722	Neurotrophin signaling pathway
384	ko04744	Phototransduction
385	ko04745	Phototransduction - fly
386	ko04740	Olfactory transduction
387	ko04742	Taste transduction
388	ko04750	Inflammatory mediator regulation of TRP channels
389	ko04320	Dorso-ventral axis formation
390	ko04360	Axon guidance
391	ko04361	Axon regeneration
392	ko04380	Osteoclast differentiation
393	ko04382	Cornified envelope formation
394	ko04211	Longevity regulating pathway
395	ko04212	Longevity regulating pathway - worm
396	ko04213	Longevity regulating pathway - multiple species
397	ko04710	Circadian rhythm
398	ko04713	Circadian entrainment
399	ko04711	Circadian rhythm - fly
400	ko04712	Circadian rhythm - plant
401	ko04714	Thermogenesis
402	ko04626	Plant-pathogen interaction
403	ko05200	Pathways in cancer
404	ko05202	Transcriptional misregulation in cancer
405	ko05206	MicroRNAs in cancer
406	ko05205	Proteoglycans in cancer
407	ko05204	Chemical carcinogenesis - DNA adducts
408	ko05207	Chemical carcinogenesis - receptor activation
409	ko05208	Chemical carcinogenesis - reactive oxygen species
410	ko05203	Viral carcinogenesis
411	ko05230	Central carbon metabolism in cancer
412	ko05231	Choline metabolism in cancer
413	ko05235	PD-L1 expression and PD-1 checkpoint pathway in cancer
414	ko05210	Colorectal cancer
415	ko05212	Pancreatic cancer
416	ko05225	Hepatocellular carcinoma
417	ko05226	Gastric cancer
418	ko05214	Glioma
419	ko05216	Thyroid cancer
420	ko05221	Acute myeloid leukemia
421	ko05220	Chronic myeloid leukemia
422	ko05217	Basal cell carcinoma
423	ko05218	Melanoma
424	ko05211	Renal cell carcinoma
425	ko05219	Bladder cancer
426	ko05215	Prostate cancer
427	ko05213	Endometrial cancer
428	ko05224	Breast cancer
429	ko05222	Small cell lung cancer
430	ko05223	Non-small cell lung cancer
431	ko05166	Human T-cell leukemia virus 1 infection
432	ko05170	Human immunodeficiency virus 1 infection
433	ko05161	Hepatitis B
434	ko05160	Hepatitis C
435	ko05171	Coronavirus disease - COVID-19
436	ko05164	Influenza A
437	ko05162	Measles
438	ko05168	Herpes simplex virus 1 infection
439	ko05163	Human cytomegalovirus infection
440	ko05167	Kaposi sarcoma-associated herpesvirus infection
441	ko05169	Epstein-Barr virus infection
442	ko05165	Human papillomavirus infection
443	ko05110	Vibrio cholerae infection
444	ko05120	Epithelial cell signaling in Helicobacter pylori infection
445	ko05130	Pathogenic Escherichia coli infection
446	ko05132	Salmonella infection
447	ko05131	Shigellosis
448	ko05135	Yersinia infection
449	ko05133	Pertussis
450	ko05134	Legionellosis
451	ko05150	Staphylococcus aureus infection
452	ko05152	Tuberculosis
453	ko05100	Bacterial invasion of epithelial cells
454	ko05146	Amoebiasis
455	ko05144	Malaria
456	ko05145	Toxoplasmosis
457	ko05140	Leishmaniasis
458	ko05142	Chagas disease
459	ko05143	African trypanosomiasis
460	ko05310	Asthma
461	ko05322	Systemic lupus erythematosus
462	ko05323	Rheumatoid arthritis
463	ko05320	Autoimmune thyroid disease
464	ko05321	Inflammatory bowel disease
465	ko05330	Allograft rejection
466	ko05332	Graft-versus-host disease
467	ko05340	Primary immunodeficiency
468	ko05010	Alzheimer disease
469	ko05012	Parkinson disease
470	ko05014	Amyotrophic lateral sclerosis
471	ko05016	Huntington disease
472	ko05017	Spinocerebellar ataxia
473	ko05020	Prion disease
474	ko05022	Pathways of neurodegeneration - multiple diseases
475	ko05030	Cocaine addiction
476	ko05031	Amphetamine addiction
477	ko05032	Morphine addiction
478	ko05033	Nicotine addiction
479	ko05034	Alcoholism
480	ko05417	Lipid and atherosclerosis
481	ko05418	Fluid shear stress and atherosclerosis
482	ko05410	Hypertrophic cardiomyopathy
483	ko05412	Arrhythmogenic right ventricular cardiomyopathy
484	ko05414	Dilated cardiomyopathy
485	ko05415	Diabetic cardiomyopathy
486	ko05416	Viral myocarditis
487	ko04930	Type II diabetes mellitus
488	ko04940	Type I diabetes mellitus
489	ko04950	Maturity onset diabetes of the young
490	ko04936	Alcoholic liver disease
491	ko04932	Non-alcoholic fatty liver disease
492	ko04931	Insulin resistance
493	ko04933	AGE-RAGE signaling pathway in diabetic complications
494	ko04934	Cushing syndrome
495	ko01501	beta-Lactam resistance
496	ko01502	Vancomycin resistance
497	ko01503	Cationic antimicrobial peptide (CAMP) resistance
498	ko01521	EGFR tyrosine kinase inhibitor resistance
499	ko01524	Platinum drug resistance
500	ko01523	Antifolate resistance
501	ko01522	Endocrine resistance