adminandClaude Fable 5 f0a1711ebc fix(aqua): batch_runner path sanitize, loader batch embed, alias expansion ...

- batch_runner: sanitize paper_id to disk dir name (was skipping all
  papers whose paper_id contains :/()); keeps explicit result path
  compat; verified 5/5 no-skip on paren-DOI papers
- qdrant_loader: batch embed via Ollama array input (32/batch, 14x:
  2.7 -> 36.9 texts/s, 24.5k points ~10min vs 2.5h); per-batch fail
  falls back to single; checkpoint format unchanged
- entity_alias_aqua: +Streptococcus agalactiae (GBS), RAS
  (forbidden_expansions), Danio rerio; merged vernacular/Chinese
  aliases for O. niloticus / O. mykiss / S. salar / L. vannamei;
  g02 gap entities now normalize correctly
- note for P3: ingest manifest MUST carry paper sidecar (pilot
  manifest_pilot.json does not - would emit paper_id="result" dirt)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

2026-09-13 01:06:38 +08:00

..

aqua

fix(aqua): batch_runner path sanitize, loader batch embed, alias expansion

2026-09-13 01:06:38 +08:00

plant

feat(aqua): unlock normalized KB identity via env with plant fallback

2026-09-12 19:10:08 +08:00