# 文档索引 根目录Markdown文档已归档到 `docs/` 目录。 ## 📁 文档分类 ### changelogs/ - 变更日志 - CHANGELOG.md - CHANGELOG_2026-04-05.md - CHANGELOG_2026-04-08.md - CHANGELOG_2026-04-09.md - CHANGELOG_2026-04-09-V12.1.md - revision_log_0330.md ### reports/ - 报告文档 - COMPARISON_REPORT.md - DATA_QUALITY_REPORT.md - FINAL_COMPLETE_REPORT.md - FINAL_QUALITY_REPORT.md - FINAL_STATUS_REPORT.md - FINAL_TEST_REPORT.md - LLM_TEST_REPORT.md - prompt_v2_evaluation_report.md ### plans/ - 计划文档 - 10DAY_DELIVERY_PLAN.md - COMPLETE_PROJECT_PLAN.md - INTEGRATION_PLAN.md - OPTIMIZATION_PLAN.md - ORGANIZATION_PLAN.md - PC_COMPARISON_PLAN.md - PROGRESS.md - PROJECT_ORGANIZE_STATUS.md - PROJECT_RECORD.md - PROJECT_STATUS.md - PROJECT_STRUCTURE.md - RAG_MASTER_PLAN.md - REVISION_PLAN.md - REVISION_SUMMARY_2026-04-05.md ### analysis/ - 分析文档 - AUTOSKG_INSIGHTS.md - COMPARISON_RESULT.md - COMPETITIVE_ANALYSIS.md - CRITICAL_ANALYSIS.md - DEEP_COMPARISON.md - DEPENDENCY_ANALYSIS.md - extract_phylogeny_v4_README.md - FINAL_SUMMARY.md - kg_completion_report.md - kg_expression_solution.md - KG_TYPE_STATUS.md - kg_validation_report.md - llm_extraction_summary.md - multi_agent_analysis.md - MULTI_AGENT_SUMMARY.md - neo4j_schema.md - PC_COMPARISON_ANALYSIS.md - PC_METHOD_SUMMARY.md - pc_workflow_analysis.md - PLANTSCIENCE_AI_STATUS.md - PLANTSCIENCE_AI_TECH_ANALYSIS.md - quality_comparison_and_solution.md - REVIEW_MECHANISM_ANALYSIS.md - SENTENCE_LEVEL_RESULT.md - test_v12_1_quality_report.md - THREE_METHODS_COMPARISON.md - V12_1_FIX_SUMMARY.md - V2_STATUS.md ### guides/ - 指南文档 - EXTRACTOR_CATALOG.md - EXTRACTOR_INVENTORY.md - VALIDATION_GUIDE.md - VALIDATION_METHODS.md ## 📄 根目录保留 - README.md - 项目主文档 - DOCS_INDEX.md - 本文档 --- *归档时间:2026-04-12*