201 lines
3.7 KiB
YAML
201 lines
3.7 KiB
YAML
expression:
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location:
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- expressed_in
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- highly_expressed_in
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- predominantly_expressed_in
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- accumulated_at_higher_level_in
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- detected_in
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- enriched_in
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up:
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- upregulated_in
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- induced_under
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- induced_in
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- increased_in
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- increased_under
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- enhanced_expression_in
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- accumulated_at_higher_level_in
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down:
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- downregulated_in
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- decreased_in
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- decreased_under
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- reduced_in
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- repressed_in
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condition:
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- differentially_expressed_under
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- expression_changed_under
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- expression_changed_in
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- responds_to
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- responsive_to
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- not_induced_under
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catalog_count:
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- has_member_count
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- identified_in
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- systematically_identified_in
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- genome_wide_identified_in
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- were_identified_in
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- was_identified_in
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- identified
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- were identified in
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- was identified in
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- identified in
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- contains
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- contain
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- encodes
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- include
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- includes
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- had
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- has_number_of_members
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- comprehensively_analyzed_in
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- analyzed_in
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- surveyed_in
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classification:
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- belongs_to
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- member_of
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- classified_into
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- divided_into
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- separated_into
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- grouped_into
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- clustered_with
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localization:
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- localizes_to
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- located_in
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- predicted_to_localize_to
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- subcellular_localized_to
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structure:
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- contains_domain
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- contains_motif
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- contains_cis_element
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- has_intron_count
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- has_exon_count
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- has_conserved_domain
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- lacks_binding_site_for
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function_effect:
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- promotes
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- inhibits
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- enhances
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- reduces
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- affects
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- regulates
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- involved_in
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- participates_in
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- contributes_to
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- associated_with
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perturbation_effect:
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- overexpression_increases
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- overexpression_enhances
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- overexpression_promotes
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- overexpression_causes
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- knockdown_reduces
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- knockdown_enhances
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- silencing_reduces
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- mutation_affects
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method:
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- used_tool
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- analyzed_by
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- predicted_by
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- aligned_with
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- constructed_with
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- identified_by
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dataset:
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- has_accession
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- available_at
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- has_data_type
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- from_database
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- from_article
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- used_for
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prior_work:
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- reported_in
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- previously_reported_in
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- cited_as
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- known_to
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stress_response:
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- responds_to
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- responsive_to
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- induced_by
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- induced_under
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- induced_in
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- upregulated_under
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- upregulated_in
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- involved_in_stress_response
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- associated_with_stress_tolerance
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- confers_tolerance_to
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- enhances_tolerance_to
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- improves_tolerance_to
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- stress tolerance
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- abiotic stress
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- biotic stress
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detoxification:
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- involved_in_detoxification
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- detoxifies
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- detoxification
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- conjugates_with_glutathione
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- catalyzes_glutathione_conjugation
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- scavenges
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- removes
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- clears
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- reduces_ros
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- maintains_redox_homeostasis
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- glutathione conjugation
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- xenobiotic detoxification
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oxidative_stress:
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- scavenges_ros
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- scavenges_h2o2
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- reduces_h2o2
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- regulates_redox_homeostasis
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- enhances_oxidative_stress_tolerance
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- involved_in_antioxidant_response
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- reactive oxygen species
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- oxidative stress
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- redox homeostasis
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functional_validation:
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- overexpression_enhances
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- overexpression_increases
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- overexpression_confers
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- overexpression_improves
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- overexpression_promotes
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- over-expression
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- overexpression
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- co_expression_enhances
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- co-expression
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- transgenic
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- mutation_affects
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- knockdown_reduces
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- silencing_reduces
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family_expansion:
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- expanded_by
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- tandemly_duplicated
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- segmentally_duplicated
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- retained_after_wgd
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- underwent_positive_selection
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- functionally_diverged
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- supergene family
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- gene family expansion
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- tandem duplication
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- segmental duplication
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- positive selection
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signaling_regulation:
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- upregulated_by
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- activated_by
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- regulated_by
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- downstream_of
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- target_of
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- ABA signaling
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- signal transduction
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- kinase
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