chore: track worktree checkout, lightweight extension staging and wgs manifests

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
2026-08-21 11:49:48 +08:00
parent c59f346037
commit 8985f5cbdd
499 changed files with 515945 additions and 0 deletions
@@ -0,0 +1,13 @@
+{
+  "manifest_version": "1.0",
+  "stage": "wgs_index",
+  "status": "failed",
+  "prefix": "p",
+  "job_id": "j",
+  "run_id": "230467c24ad04d2d9b9434a75070e4c9",
+  "start_time": "2026-08-21T03:15:29.907409+00:00",
+  "artifacts": {},
+  "errors": [
+    "reference FASTA must be an existing non-empty regular file"
+  ]
+}
@@ -0,0 +1,13 @@
+{
+  "manifest_version": "1.0",
+  "stage": "wgs_index",
+  "status": "failed",
+  "prefix": "p",
+  "job_id": "j",
+  "run_id": "cdf6abcccb684d049ac2248028a564d0",
+  "start_time": "2026-08-21T03:27:24.606679+00:00",
+  "artifacts": {},
+  "errors": [
+    "reference FASTA must be an existing non-empty regular file"
+  ]
+}
@@ -0,0 +1,13 @@
+{
+  "manifest_version": "1.0",
+  "stage": "wgs_index",
+  "status": "failed",
+  "prefix": "p",
+  "job_id": "j",
+  "run_id": "f497846199844ad98535ec74ce2938b3",
+  "start_time": "2026-08-21T03:36:16.122095+00:00",
+  "artifacts": {},
+  "errors": [
+    "reference FASTA must be an existing non-empty regular file"
+  ]
+}