34 lines
660 B
YAML
Executable File
34 lines
660 B
YAML
Executable File
# Domain Analysis Skill Configuration
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skill:
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name: domain-analysis
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version: "1.0.0"
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description: "蛋白结构域分析 - HMMER+Pfam"
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author: "bbav2-team"
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input:
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protein_fasta: null # 必需: 蛋白序列FASTA文件
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pfam_hmm: null # 必需: Pfam HMM模型文件
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parameters:
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hmmscan:
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evalue: 1e-5
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coverage: 0.5
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use_cut_ga: false
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cpu: 8
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output:
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format: ["tsv", "json"]
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report_template: "templates/report.md.j2"
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include_reproducibility: true
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dependencies:
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conda:
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channels:
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- bioconda
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- conda-forge
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packages:
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- hmmer=3.3.2
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- biopython=1.81
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- pandas=2.0.0
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- matplotlib=3.7.0 |