54 lines
1.5 KiB
Bash
Executable File
54 lines
1.5 KiB
Bash
Executable File
# LLM API Keys
|
|
ZHIPUAI_API_KEY=
|
|
MINIMAX_API_KEY=
|
|
MOONSHOT_API_KEY=
|
|
DEEPSEEK_API_KEY=
|
|
DASHSCOPE_API_KEY=
|
|
|
|
# Database
|
|
DATABASE_URL=postgresql://user:password@localhost:5432/genefamily
|
|
REDIS_URL=redis://localhost:6379/0
|
|
|
|
# Vector DB
|
|
VECTOR_DB_TYPE=qdrant
|
|
QDRANT_URL=http://localhost:6333
|
|
|
|
# Log Level
|
|
LOG_LEVEL=INFO
|
|
ENVIRONMENT=development
|
|
|
|
# Project runtime
|
|
BBAV5_PROJECT_ROOT=/home/xzq/5090/PlantAI-dev4090-7/PlantAI-dev
|
|
BBAV5_CONDA_BASE=/home/xzq/miniconda3
|
|
BBAV5_DEFAULT_ENV=test4py311
|
|
BBAV5_GFPY_ENV=gfpy312
|
|
BBAV5_RNASEQ_ENV=rnaseq
|
|
BBAV5_RNAR_ENV=rnaR
|
|
BBAV5_QUEUE_PREFIX=plantai_dev_7880
|
|
BBAV5_REDIS_URL=redis://localhost:6379/8
|
|
BBAV5_INTERPROSCAN_TMP_ROOT=/tmp/interproscan
|
|
PLANTAI_MAIN_AGENT_MAX_TOOL_CALLS=10
|
|
PLANTAI_AGENT_STATE_DB=workspace/.agent_state/agent-state.sqlite3
|
|
WGS_BCFTOOLS=
|
|
WGS_BEAGLE_JAR=
|
|
|
|
# gene-family-mas-v2 RAG/QA integration
|
|
# QA: /api/v1/kb-qa/chat; graph subgraph: /api/v1/v15-graph-qa/chat.
|
|
GENE_FAMILY_MAS_API=http://127.0.0.1:8000
|
|
DUAL_KB_QA_ROUTE=kb-qa
|
|
DUAL_KB_GRAPH_QA_ROUTE=v15-graph-qa
|
|
METHODOLOGY_RAG_API=http://127.0.0.1:8000/api/v1
|
|
|
|
# PlantCARE promoter stage
|
|
PLANTCARE_IMAP_SERVER=imap.qq.com
|
|
PLANTCARE_IMAP_PORT=993
|
|
PLANTCARE_EMAIL_ACCOUNT=
|
|
PLANTCARE_EMAIL_PASSWORD=
|
|
|
|
# Optional external integrations
|
|
# GF_MAS_ROOT=/home/xzq/gene-family-mas-v2
|
|
# PLANTAI_RAG_ROOT=/home/xzq/PlantAI-rag
|
|
ATH_REF_DATA_DIR=/home/xzq/wutx/data/raw_genome/ath
|
|
ATH_FAMILY_ROOT=/home/xzq/wutx/data/raw_genome/ath_family
|
|
PLANTAI_REF_DATA_ROOT=/home/xzq/wutx/data/raw_genome
|