11 lines
322 B
Markdown
Executable File
11 lines
322 B
Markdown
Executable File
# 核型图
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## 数据
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(1)Ft.gff
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(2)Ft.SPL.geneID
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(3)统计染色体长度(genome.len)
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seqkit fx2tab -l -n -i Ft.genome.fasta |grep "^Ft" |awk '{print $1"\t"$2}' > genome.len
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(4)共线性
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Ft.tandem
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## 绘图
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Rscript karyogram_gene_family.R ../Ft.gff ../Ft.SPL.geneID ../genome.len ../Ft.tandem Ft.SPL.karyogram.pdf
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